Detailed information NTG1002892

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF84_RS08450
• Genome accession: NZ_CP156795
• Coordinates: 1713005..1714183 (-)
• Length: 392 a.a.
• NCBI ID: WP_034588275.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7912
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1708005..1719183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF84_RS08430 (ABEF84_08430)	-	1708538..1709566 (+)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF84_RS08435 (ABEF84_08435)	gcvH	1709639..1710013 (+)	375	WP_034588271.1	glycine cleavage system protein GcvH	-
ABEF84_RS08440 (ABEF84_08440)	-	1710250..1711443 (+)	1194	WP_034588273.1	MFS transporter	-
ABEF84_RS08445 (ABEF84_08445)	pilU	1711494..1712699 (-)	1206	WP_034588274.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF84_RS08450 (ABEF84_08450)	pilU	1713005..1714183 (-)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF84_RS08455 (ABEF84_08455)	-	1714396..1715445 (-)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF84_RS08460 (ABEF84_08460)	-	1716218..1717327 (-)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABEF84_RS08465 (ABEF84_08465)	-	1717450..1719006 (+)	1557	WP_034588284.1	phospholipase D family protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44232.69 Da
• Isoelectric Point: 6.1884

>NTDB_id=1002892 ABEF84_RS08450 WP_034588275.1 1713005..1714183(-) (pilU) [Acinetobacter thermotolerans strain ANC 7912]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADYPPSIKQQGLMKPFGQQKLTADKTKLFAYSLMNQRQIQEFESIMEC
NFSMSVPDVARFRVNVFQQQHNVGMVIRSVSTDIPSFEQLGLPYSLKKVIMEKRGLVLIVGATGVGKSTTLAAMLDHRNA
NTEGHIITVEDPVEYVYQHKKSMITQREIGVDCVSWHNALLNAMRQAPDVIAIGEIRDTESMEHAIAFAETGHLCVATLH
SSNADQALDRIINFFPEERRNQLLLDLSANLKAVISQRLIRTEDGKGRRAAVELLLNTPLVSDYIRKGELYELKGIMQKS
REQGMQTFDQALFDLYNDGLISYEEALCNADSSNELRLQIKLKSGRINPALQEEGGNMTILEQSKETLLSRS

Nucleotide

• Length: 1179 bp

>NTDB_id=1002892 ABEF84_RS08450 WP_034588275.1 1713005..1714183(-) (pilU) [Acinetobacter thermotolerans strain ANC 7912]
ATGTATACTCCTGAACTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTCACTAAAGTGGTGGAATATGGCGGCTC
AGACCTATTTATTACTGCAGATTACCCACCGAGTATTAAACAGCAAGGGCTGATGAAGCCTTTTGGTCAGCAGAAACTCA
CGGCAGATAAAACCAAATTGTTTGCTTATTCTTTAATGAACCAGCGTCAGATTCAGGAATTTGAATCCATTATGGAATGC
AATTTCAGCATGAGTGTACCTGATGTTGCCCGTTTCCGCGTCAATGTTTTTCAGCAACAGCATAACGTCGGTATGGTCAT
CCGAAGTGTCAGCACAGATATTCCAAGCTTTGAGCAACTTGGACTGCCATATTCGTTAAAAAAAGTGATTATGGAAAAAC
GCGGCTTAGTCCTCATTGTGGGGGCAACGGGGGTAGGTAAATCCACGACTTTGGCTGCAATGCTGGATCATCGAAATGCC
AATACTGAAGGGCATATCATTACTGTAGAAGACCCGGTGGAATATGTTTATCAGCATAAAAAATCCATGATTACCCAGCG
TGAGATTGGGGTGGATTGTGTGTCCTGGCATAATGCCTTGCTGAATGCCATGCGTCAGGCACCAGATGTAATTGCTATTG
GTGAAATCCGCGATACTGAGAGTATGGAGCATGCGATTGCTTTTGCTGAAACCGGACATCTGTGTGTAGCAACACTGCAT
TCAAGTAATGCGGATCAGGCTCTAGACCGGATTATTAACTTCTTCCCGGAAGAGCGCCGGAATCAGTTATTGTTGGACTT
ATCAGCCAATCTTAAAGCGGTCATTTCACAACGTCTGATTCGGACGGAAGATGGTAAAGGCCGCCGTGCTGCAGTAGAGT
TGTTATTAAATACGCCGCTGGTCTCAGATTATATCCGTAAGGGTGAACTTTATGAGCTGAAAGGTATTATGCAGAAATCG
CGTGAACAGGGCATGCAAACCTTTGATCAGGCACTATTTGACCTTTATAACGATGGTTTGATTTCCTATGAAGAAGCACT
GTGCAATGCGGATTCCAGTAACGAATTACGTTTGCAAATCAAATTAAAGAGCGGTCGCATCAATCCCGCCCTTCAGGAAG
AAGGTGGAAATATGACCATACTGGAACAGTCTAAAGAAACGTTACTATCAAGAAGTTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (52-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.184	88.776	0.508
pilU	Acinetobacter baylyi ADP1	55.331	88.52	0.49
pilU	Vibrio cholerae strain A1552	51.261	91.071	0.467
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.647	86.735	0.37