Detailed information NTG1002549

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF83_RS06840
• Genome accession: NZ_CP156768
• Coordinates: 1415962..1417140 (+)
• Length: 392 a.a.
• NCBI ID: WP_034588275.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7974
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1410962..1422140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF83_RS06825 (ABEF83_06825)	-	1411139..1412695 (-)	1557	WP_034588284.1	phospholipase D family protein	-
ABEF83_RS06830 (ABEF83_06830)	-	1412818..1413927 (+)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABEF83_RS06835 (ABEF83_06835)	-	1414700..1415749 (+)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF83_RS06840 (ABEF83_06840)	pilU	1415962..1417140 (+)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF83_RS06845 (ABEF83_06845)	pilU	1417446..1418651 (+)	1206	WP_347454159.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF83_RS06850 (ABEF83_06850)	-	1418711..1419904 (-)	1194	WP_347452720.1	MFS transporter	-
ABEF83_RS06855 (ABEF83_06855)	-	1419965..1420138 (+)	174	WP_347454918.1	hypothetical protein	-
ABEF83_RS06860 (ABEF83_06860)	gcvH	1420140..1420514 (-)	375	WP_347452719.1	glycine cleavage system protein GcvH	-
ABEF83_RS06865 (ABEF83_06865)	-	1420587..1421615 (-)	1029	WP_034588270.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44232.69 Da
• Isoelectric Point: 6.1884

>NTDB_id=1002549 ABEF83_RS06840 WP_034588275.1 1415962..1417140(+) (pilU) [Acinetobacter thermotolerans strain ANC 7974]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADYPPSIKQQGLMKPFGQQKLTADKTKLFAYSLMNQRQIQEFESIMEC
NFSMSVPDVARFRVNVFQQQHNVGMVIRSVSTDIPSFEQLGLPYSLKKVIMEKRGLVLIVGATGVGKSTTLAAMLDHRNA
NTEGHIITVEDPVEYVYQHKKSMITQREIGVDCVSWHNALLNAMRQAPDVIAIGEIRDTESMEHAIAFAETGHLCVATLH
SSNADQALDRIINFFPEERRNQLLLDLSANLKAVISQRLIRTEDGKGRRAAVELLLNTPLVSDYIRKGELYELKGIMQKS
REQGMQTFDQALFDLYNDGLISYEEALCNADSSNELRLQIKLKSGRINPALQEEGGNMTILEQSKETLLSRS

Nucleotide

• Length: 1179 bp

>NTDB_id=1002549 ABEF83_RS06840 WP_034588275.1 1415962..1417140(+) (pilU) [Acinetobacter thermotolerans strain ANC 7974]
ATGTATACTCCTGAACTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTCACTAAAGTGGTGGAATATGGCGGCTC
AGACCTATTTATTACTGCAGATTACCCACCGAGTATTAAACAGCAAGGGCTGATGAAGCCTTTTGGTCAGCAGAAACTCA
CGGCAGATAAAACCAAATTGTTTGCTTATTCTTTAATGAACCAGCGTCAGATTCAGGAATTTGAATCCATTATGGAATGC
AATTTCAGCATGAGTGTACCTGATGTTGCCCGTTTCCGCGTCAATGTTTTTCAGCAACAGCATAACGTCGGTATGGTCAT
CCGAAGTGTCAGCACAGATATTCCAAGCTTTGAGCAACTTGGACTGCCATATTCGTTAAAAAAAGTGATTATGGAAAAAC
GCGGCTTAGTCCTCATTGTGGGGGCAACGGGGGTAGGTAAATCCACGACTTTGGCTGCAATGCTGGATCATCGAAATGCC
AATACTGAAGGGCATATCATTACTGTAGAAGACCCGGTGGAATATGTTTATCAGCATAAAAAATCCATGATTACCCAGCG
TGAGATTGGGGTGGATTGTGTGTCCTGGCATAATGCCTTGCTGAATGCCATGCGTCAGGCACCAGATGTAATTGCTATTG
GTGAAATCCGCGATACTGAGAGTATGGAGCATGCGATTGCTTTTGCTGAAACCGGACATCTGTGTGTAGCAACACTGCAT
TCAAGTAATGCGGATCAGGCTCTAGACCGGATTATTAACTTCTTCCCGGAAGAGCGCCGGAATCAGTTATTGTTGGACTT
ATCAGCCAATCTTAAAGCGGTCATTTCACAACGTCTGATTCGGACGGAAGATGGTAAAGGCCGCCGTGCTGCAGTAGAGT
TGTTATTAAATACGCCGCTGGTCTCAGATTATATCCGTAAGGGTGAACTTTATGAGCTGAAAGGTATTATGCAGAAATCG
CGTGAACAGGGCATGCAAACCTTTGATCAGGCACTATTTGACCTTTATAACGATGGTTTGATTTCCTATGAAGAAGCACT
GTGCAATGCGGATTCCAGTAACGAATTACGTTTGCAAATCAAATTAAAGAGCGGTCGCATCAATCCCGCCCTTCAGGAAG
AAGGTGGAAATATGACCATACTGGAACAGTCTAAAGAAACGTTACTATCAAGAAGTTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (52-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.184	88.776	0.508
pilU	Acinetobacter baylyi ADP1	55.331	88.52	0.49
pilU	Vibrio cholerae strain A1552	51.261	91.071	0.467
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.647	86.735	0.37