Detailed information NTG1002550

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF83_RS06845
• Genome accession: NZ_CP156768
• Coordinates: 1417446..1418651 (+)
• Length: 401 a.a.
• NCBI ID: WP_347454159.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7974
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1412446..1423651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF83_RS06830 (ABEF83_06830)	-	1412818..1413927 (+)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABEF83_RS06835 (ABEF83_06835)	-	1414700..1415749 (+)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF83_RS06840 (ABEF83_06840)	pilU	1415962..1417140 (+)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF83_RS06845 (ABEF83_06845)	pilU	1417446..1418651 (+)	1206	WP_347454159.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF83_RS06850 (ABEF83_06850)	-	1418711..1419904 (-)	1194	WP_347452720.1	MFS transporter	-
ABEF83_RS06855 (ABEF83_06855)	-	1419965..1420138 (+)	174	WP_347454918.1	hypothetical protein	-
ABEF83_RS06860 (ABEF83_06860)	gcvH	1420140..1420514 (-)	375	WP_347452719.1	glycine cleavage system protein GcvH	-
ABEF83_RS06865 (ABEF83_06865)	-	1420587..1421615 (-)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF83_RS06870 (ABEF83_06870)	-	1421767..1422216 (-)	450	WP_347452718.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 45386.74 Da
• Isoelectric Point: 6.2782

>NTDB_id=1002550 ABEF83_RS06845 WP_347454159.1 1417446..1418651(+) (pilU) [Acinetobacter thermotolerans strain ANC 7974]
MFTAELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQNLTADKTKLFAYALMNEKQRQEYETELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGQGRRAAVEIMLNTPLISDLILKGDFHELKAIMAKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELRLQIKLKSSRTNPELNNNPTSFSMVEEKKPEDEVDGESKTEEQT
S

Nucleotide

• Length: 1206 bp

>NTDB_id=1002550 ABEF83_RS06845 WP_347454159.1 1417446..1418651(+) (pilU) [Acinetobacter thermotolerans strain ANC 7974]
ATGTTCACGGCAGAGTTATTAGAAGAAGCACGTAAATTTATGCACCATATGCTCACCAAAGTGGTGGAATATGGTGGTTC
GGATTTATTTATTACTGCCGACTTTCCACCGAGTATCAAACATCAGGGGCTGATGAAACCTTTTGGTCAGCAAAACCTAA
CTGCAGATAAAACCAAGCTGTTTGCTTATGCGTTGATGAATGAAAAACAGCGTCAGGAATACGAAACTGAGCTGGAATGT
AACTTTGCCATTACCGTGCCGGGTGTTTCCCGTTTCCGTGTCAATGTTTTTCAGCAACAGCTCAATGTAGGAATGGTGAT
CCGTACCATTACTGCAGAAATTCCGAACTTCCAGAAACTGAAATTACCTGAATCACTCAAACATGTGATTATGGAAAAAC
GCGGGCTAGTATTGGTTGTTGGGGGGACTGGGTCTGGTAAATCGACCTCACTGGCAGCGATGATTGATTACCGGAATGAA
AATTCCGCCGGACATATCATTACCGTAGAAGATCCGGTGGAATATGTGCATAAGCATAAAAAGTCCATGATCACCCACCG
TGAAGTCGGTGTAGACAGTCACTCCTGGCACAATGCGCTAAAAAATACCCTACGTCAGGCGCCGGATGTGATTCTGATTG
GCGAGATCCGTGATACCGAAACCATGGAACACGCGATTGCCTTTGCCGAAACTGGACACTTATGTCTAGGAACACTACAT
GCCAACAACGCCAACCAGACTTTGGATCGGATTATTAACTTCTTCCCGGAAGAGCGCCGTAATCAGTTGTTGATGGATCT
GTCTTCCAATATGAAAGCCATTATTTCCCAGCGTCTAATTCGTACTCAAGATGGTCAAGGCCGTCGTGCAGCAGTGGAGA
TCATGTTAAATACGCCGCTGATTTCTGACCTGATTTTAAAAGGCGATTTCCATGAGTTGAAAGCAATTATGGCCAAATCC
CGTGAACTCGGTATGCAGACTTTCGATCAGGCACTGTTCGACTTGTACAACGAAGGGGCGATTTCTTATGAAGAGGCACT
ACGTAATGCAGATTCAACTAATGAATTGCGTTTACAAATTAAACTAAAAAGTAGTCGAACCAATCCTGAGTTGAATAATA
ATCCTACTTCATTCAGTATGGTTGAAGAGAAAAAGCCGGAAGATGAAGTTGATGGCGAAAGCAAGACTGAAGAACAGACT
TCTTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (116-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	60.057	86.783	0.521
pilU	Acinetobacter baylyi ADP1	56.145	89.277	0.501
pilU	Vibrio cholerae strain A1552	52.394	88.529	0.464