Detailed information NTG1002528

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABFT82_RS19690
• Genome accession: NZ_CP156749
• Coordinates: 4007757..4008821 (+)
• Length: 354 a.a.
• NCBI ID: WP_347505747.1
• Uniprot ID: -
• Organism: Pseudomonas anguilliseptica strain SICAU PA001 isolate largemouth bass
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4002757..4013821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFT82_RS19680 (ABFT82_19680)	-	4003793..4005061 (+)	1269	WP_090380552.1	malic enzyme-like NAD(P)-binding protein	-
ABFT82_RS19685 (ABFT82_19685)	-	4005158..4007575 (-)	2418	WP_347505746.1	penicillin-binding protein 1A	-
ABFT82_RS19690 (ABFT82_19690)	pilM	4007757..4008821 (+)	1065	WP_347505747.1	pilus assembly protein PilM	Machinery gene
ABFT82_RS19695 (ABFT82_19695)	pilN	4008821..4009393 (+)	573	WP_090380561.1	type 4a pilus biogenesis protein PilN	-
ABFT82_RS19700 (ABFT82_19700)	pilO	4009390..4010013 (+)	624	WP_090380564.1	type 4a pilus biogenesis protein PilO	-
ABFT82_RS19705 (ABFT82_19705)	pilP	4010013..4010531 (+)	519	WP_347507613.1	type 4a pilus biogenesis lipoprotein PilP	-
ABFT82_RS19710 (ABFT82_19710)	pilQ	4010587..4012671 (+)	2085	WP_347507615.1	type IV pilus secretin PilQ	Machinery gene
ABFT82_RS19715 (ABFT82_19715)	aroK	4012676..4013194 (+)	519	WP_090380567.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37852.32 Da
• Isoelectric Point: 4.4656

>NTDB_id=1002528 ABFT82_RS19690 WP_347505747.1 4007757..4008821(+) (pilM) [Pseudomonas anguilliseptica strain SICAU PA001 isolate largemouth bass]
MLGLFNKKANTLLGIDISSTSVKLLELSRSGSRYKVEAYAVEPLPPNAVVEKNIAELEGVGQALSRVLAKAKSGVKTVAV
AVAGSAVITKTIEMEAGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGASPRNADRVEVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERTYGLLIEQLGGGRDELTVAVVDIGATMTTLSVLRNGRTIYTREQLFGGKQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKEAVVQQVARSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTQTLVANP
FAEMALSGKVNAGALAGDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1002528 ABFT82_RS19690 WP_347505747.1 4007757..4008821(+) (pilM) [Pseudomonas anguilliseptica strain SICAU PA001 isolate largemouth bass]
GTGCTAGGGCTCTTCAATAAGAAAGCGAATACGCTACTCGGGATCGATATCAGTTCGACCTCCGTCAAACTCCTCGAATT
GAGCCGCTCCGGAAGCCGCTACAAGGTAGAGGCTTACGCAGTCGAGCCGCTCCCACCAAATGCGGTGGTCGAAAAGAACA
TCGCCGAACTGGAAGGGGTGGGTCAGGCGCTTTCGCGCGTACTTGCTAAAGCCAAAAGCGGCGTGAAAACCGTTGCAGTG
GCGGTGGCAGGCTCGGCAGTGATTACCAAGACCATCGAAATGGAAGCTGGGCTTTCCGATGATGAGCTTGAAAATCAGCT
GAAGATCGAAGCCGACCAGTACATTCCCTATCCGCTGGAAGAAGTCGCAATCGACTTTGAGGTGCAAGGCGCATCACCGC
GCAATGCCGATCGCGTTGAAGTGCTGCTTGCAGCGTGCCGCAAGGAAAACGTCGAAGTGCGCGAAGCGGCGTTGGCGCTG
GCCGGTTTAACCGCCAAGGTTGTCGACGTTGAAGCCTATGCCCTTGAGCGTACATACGGTCTGTTGATCGAGCAGCTTGG
CGGTGGTCGCGATGAGCTGACAGTTGCCGTTGTCGATATCGGTGCCACCATGACCACGCTGAGCGTGTTGCGCAATGGTC
GCACTATCTATACCCGTGAGCAGCTGTTTGGCGGTAAGCAACTCACCGAAGAAATTCAGCGTCGTTATGGTCTGTCTGTT
GAAGAAGCTGGGCTGGCCAAGAAGCAAGGCGGCTTGCCGGACGACTATGACAGTGAGGTGTTGCAGCCATTCAAAGAGGC
TGTAGTTCAGCAGGTGGCTCGTTCGCTACAGTTCTTCTTCGCTGCTGGTCAGTTCAATGATGTTGACTACATCTTGCTGG
CTGGCGGCACCGCGTCGATTCCCGATCTTGATCGTTTGATTCAGCAAAAAATAGGCACCCAGACATTGGTCGCCAATCCA
TTCGCTGAAATGGCGCTGAGTGGCAAGGTCAACGCAGGTGCGCTCGCCGGTGATGCGCCTGCCTTGATGATTGCCTGTGG
GCTGGCGATGAGGAGTTTCGACTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.497	100	0.565
comM	Acinetobacter nosocomialis M2	56.497	100	0.565
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	45.48	100	0.455