Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   ABC807_RS01150 Genome accession   NZ_CP156625
Coordinates   220243..220635 (+) Length   130 a.a.
NCBI ID   WP_050202681.1    Uniprot ID   A0A4J2BTN4
Organism   Streptococcus pneumoniae strain TL7/1993     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 215243..225635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC807_RS01110 (ABC807_01110) - 215299..216357 (+) 1059 WP_000649468.1 zinc-dependent alcohol dehydrogenase family protein -
  ABC807_RS01115 (ABC807_01115) - 216508..216873 (+) 366 WP_000286415.1 DUF1033 family protein -
  ABC807_RS01120 (ABC807_01120) comGA/cglA/cilD 216949..217890 (+) 942 WP_000249536.1 competence type IV pilus ATPase ComGA Machinery gene
  ABC807_RS01125 (ABC807_01125) comGB/cglB 217838..218854 (+) 1017 WP_078130737.1 competence type IV pilus assembly protein ComGB Machinery gene
  ABC807_RS01130 (ABC807_01130) comGC/cglC 218856..219179 (+) 324 WP_000738628.1 comG operon protein ComGC Machinery gene
  ABC807_RS01135 (ABC807_01135) comGD/cglD 219142..219576 (+) 435 WP_033606693.1 competence type IV pilus minor pilin ComGD Machinery gene
  ABC807_RS01140 (ABC807_01140) comGE/cglE 219539..219841 (+) 303 WP_000413382.1 competence type IV pilus minor pilin ComGE Machinery gene
  ABC807_RS01145 (ABC807_01145) comGF/cglF 219804..220265 (+) 462 WP_000250531.1 competence type IV pilus minor pilin ComGF Machinery gene
  ABC807_RS01150 (ABC807_01150) comGG/cglG 220243..220635 (+) 393 WP_050202681.1 competence type IV pilus minor pilin ComGG Machinery gene
  ABC807_RS01155 (ABC807_01155) - 220791..221383 (+) 593 Protein_211 methyltransferase domain-containing protein -
  ABC807_RS01160 (ABC807_01160) comYH 221444..222397 (+) 954 WP_000345126.1 class I SAM-dependent methyltransferase Machinery gene
  ABC807_RS01165 (ABC807_01165) - 222448..223638 (+) 1191 WP_000167765.1 acetate kinase -
  ABC807_RS01170 (ABC807_01170) - 223639..223770 (+) 132 WP_000768904.1 hypothetical protein -
  ABC807_RS01175 (ABC807_01175) rnpA 223787..224158 (+) 372 WP_000739246.1 ribonuclease P protein component -
  ABC807_RS01180 (ABC807_01180) - 224133..224957 (+) 825 WP_000727904.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 130 a.a.        Molecular weight: 15119.52 Da        Isoelectric Point: 10.3195

>NTDB_id=1001812 ABC807_RS01150 WP_050202681.1 220243..220635(+) (comGG/cglG) [Streptococcus pneumoniae strain TL7/1993]
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFSSVKIKEEKTDKKEEVVTDSSEKAEKKIRREA

Nucleotide


Download         Length: 393 bp        

>NTDB_id=1001812 ABC807_RS01150 WP_050202681.1 220243..220635(+) (comGG/cglG) [Streptococcus pneumoniae strain TL7/1993]
GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTGCA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGTCAATATGAGTTTCTGTTTTCTTCAGTCAAAATCAAAGAAGAGAA
AACGGATAAAAAGGAAGAGGTAGTGACTGATTCAAGCGAAAAAGCGGAGAAAAAAATCAGAAGAGAAGCCTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4J2BTN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus pneumoniae Rx1

95.726

90

0.862

  comGG/cglG Streptococcus pneumoniae D39

95.726

90

0.862

  comGG/cglG Streptococcus pneumoniae R6

95.726

90

0.862

  comGG/cglG Streptococcus pneumoniae TIGR4

95.726

90

0.862

  comGG/cglG Streptococcus mitis NCTC 12261

90.984

93.846

0.854

  comGG/cglG Streptococcus mitis SK321

87.705

93.846

0.823


Multiple sequence alignment