Detailed information NTG1001809

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ABC807_RS01135
• Genome accession: NZ_CP156625
• Coordinates: 219142..219576 (+)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TL7/1993
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 214142..224576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC807_RS01110 (ABC807_01110)	-	215299..216357 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
ABC807_RS01115 (ABC807_01115)	-	216508..216873 (+)	366	WP_000286415.1	DUF1033 family protein	-
ABC807_RS01120 (ABC807_01120)	comGA/cglA/cilD	216949..217890 (+)	942	WP_000249536.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC807_RS01125 (ABC807_01125)	comGB/cglB	217838..218854 (+)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC807_RS01130 (ABC807_01130)	comGC/cglC	218856..219179 (+)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
ABC807_RS01135 (ABC807_01135)	comGD/cglD	219142..219576 (+)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC807_RS01140 (ABC807_01140)	comGE/cglE	219539..219841 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABC807_RS01145 (ABC807_01145)	comGF/cglF	219804..220265 (+)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC807_RS01150 (ABC807_01150)	comGG/cglG	220243..220635 (+)	393	WP_050202681.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABC807_RS01155 (ABC807_01155)	-	220791..221383 (+)	593	Protein_211	methyltransferase domain-containing protein	-
ABC807_RS01160 (ABC807_01160)	comYH	221444..222397 (+)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
ABC807_RS01165 (ABC807_01165)	-	222448..223638 (+)	1191	WP_000167765.1	acetate kinase	-
ABC807_RS01170 (ABC807_01170)	-	223639..223770 (+)	132	WP_000768904.1	hypothetical protein	-
ABC807_RS01175 (ABC807_01175)	rnpA	223787..224158 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=1001809 ABC807_RS01135 WP_033606693.1 219142..219576(+) (comGD/cglD) [Streptococcus pneumoniae strain TL7/1993]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=1001809 ABC807_RS01135 WP_033606693.1 219142..219576(+) (comGD/cglD) [Streptococcus pneumoniae strain TL7/1993]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444