Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | ABC807_RS01140 | Genome accession | NZ_CP156625 |
| Coordinates | 219539..219841 (+) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TL7/1993 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 214539..224841
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC807_RS01110 (ABC807_01110) | - | 215299..216357 (+) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| ABC807_RS01115 (ABC807_01115) | - | 216508..216873 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| ABC807_RS01120 (ABC807_01120) | comGA/cglA/cilD | 216949..217890 (+) | 942 | WP_000249536.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABC807_RS01125 (ABC807_01125) | comGB/cglB | 217838..218854 (+) | 1017 | WP_078130737.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABC807_RS01130 (ABC807_01130) | comGC/cglC | 218856..219179 (+) | 324 | WP_000738628.1 | comG operon protein ComGC | Machinery gene |
| ABC807_RS01135 (ABC807_01135) | comGD/cglD | 219142..219576 (+) | 435 | WP_033606693.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABC807_RS01140 (ABC807_01140) | comGE/cglE | 219539..219841 (+) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABC807_RS01145 (ABC807_01145) | comGF/cglF | 219804..220265 (+) | 462 | WP_000250531.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABC807_RS01150 (ABC807_01150) | comGG/cglG | 220243..220635 (+) | 393 | WP_050202681.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABC807_RS01155 (ABC807_01155) | - | 220791..221383 (+) | 593 | Protein_211 | methyltransferase domain-containing protein | - |
| ABC807_RS01160 (ABC807_01160) | comYH | 221444..222397 (+) | 954 | WP_000345126.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABC807_RS01165 (ABC807_01165) | - | 222448..223638 (+) | 1191 | WP_000167765.1 | acetate kinase | - |
| ABC807_RS01170 (ABC807_01170) | - | 223639..223770 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| ABC807_RS01175 (ABC807_01175) | rnpA | 223787..224158 (+) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=1001810 ABC807_RS01140 WP_000413382.1 219539..219841(+) (comGE/cglE) [Streptococcus pneumoniae strain TL7/1993]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=1001810 ABC807_RS01140 WP_000413382.1 219539..219841(+) (comGE/cglE) [Streptococcus pneumoniae strain TL7/1993]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |