TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Antitoxin (Protein)


Predicted family higA (AT325) Predicted domain PF13560 (HTH_31)
Locus tag orf1369 Length 71 a.a.
Coordinates 1449804..1450019 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf1351 1445263..1445778 - 516 ORF1351 Predicted ORF by PRODIGAL Version 1.20 -
orf1352 1445779..1446486 - 708 ORF1352 Predicted ORF by PRODIGAL Version 1.20 -
orf1353 1446586..1446744 - 159 ORF1353 Predicted ORF by PRODIGAL Version 1.20 -
orf1354 1446741..1446911 - 171 ORF1354 Predicted ORF by PRODIGAL Version 1.20 -
orf1355 1447097..1447285 - 189 ORF1355 Predicted ORF by PRODIGAL Version 1.20 -
orf1356 1447285..1447614 - 330 ORF1356 Predicted ORF by PRODIGAL Version 1.20 -
orf1357 1447667..1448032 - 366 ORF1357 Predicted ORF by PRODIGAL Version 1.20 -
orf1358 1448090..1448368 - 279 ORF1358 Predicted ORF by PRODIGAL Version 1.20 -
orf1359 1448371..1448679 - 309 ORF1359 Predicted ORF by PRODIGAL Version 1.20 -
orf1360 1449033..1449686 - 654 ORF1360 Predicted ORF by PRODIGAL Version 1.20 -
orf1361 1449804..1450019 + 216 ORF1361 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf1362 1450129..1450425 + 297 ORF1362 Predicted ORF by PRODIGAL Version 1.20 -
orf1363 1450458..1450604 + 147 ORF1363 Predicted ORF by PRODIGAL Version 1.20 -
orf1364 1450597..1451496 + 900 ORF1364 Predicted ORF by PRODIGAL Version 1.20 -
orf1365 1451486..1452922 + 1437 ORF1365 Predicted ORF by PRODIGAL Version 1.20 -
orf1366 1453317..1453763 + 447 ORF1366 Predicted ORF by PRODIGAL Version 1.20 -
orf1367 1453760..1454287 + 528 ORF1367 Predicted ORF by PRODIGAL Version 1.20 -
orf1368 1454463..1454822 + 360 ORF1368 Predicted ORF by PRODIGAL Version 1.20 -
orf1369 1454822..1454998 + 177 ORF1369 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 7770.99 Da        Isoelectric Point: 9.9220

>ORF1361 Orphan_TA_27 Antitoxin
MSNLRKYRESLNISQTTLAKAVGCTQGAIGHWESGRRFPDLKTCRALVACLNKLGAKVSL
DDVFPPEHKAA

Download         Length: 216 bp

>ORF1361 Orphan_TA_27 Antitoxin
ATGAGCAACCTACGAAAATATCGAGAGTCACTGAATATCTCTCAAACAACACTTGCTAAG
GCGGTTGGATGCACACAGGGAGCTATCGGACATTGGGAATCTGGTCGTCGCTTCCCAGAC
CTTAAAACATGCCGTGCTCTTGTTGCGTGCCTAAACAAGTTAGGCGCAAAAGTCAGTCTT
GATGACGTGTTCCCGCCGGAACACAAAGCCGCTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT325 Streptococcus pneumoniae TIGR4

34.783

71.134

0.338
AT303 Pseudomonas putida KT2440

32

52.632

0.225
AT1067 Haemophilus influenzae Rd KW20

37.736

54.082

0.282
AT182 Pseudomonas aeruginosa PAO1

40.625

17.391

0.183
AT6088 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

27.778

42.857

0.141
AT174 Vibrio cholerae O1 biovar El Tor str. N16961

30.303

31.731

0.141