MGE detailed information
MGE type: Mobilizable plasmid MGE length: 164477 bp
Accession: NZ_LS992186 Location: 1..164477 Organism: Escherichia coli isolate Escherichia coli str. 3426 Replicon: plasmid 2
Accession: NZ_LS992186 Location: 1..164477 Organism: Escherichia coli isolate Escherichia coli str. 3426 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC3426_RS24110 () | 1272..2702 | - | 1431 | Protein_1 | glycoside hydrolase family 32 protein | - |
| EC3426_RS24115 () | 2699..3975 | - | 1277 | Protein_2 | MFS transporter | - |
| EC3426_RS24120 () | 4038..6163 | - | 2126 | Protein_3 | alpha-galactosidase | - |
| EC3426_RS24125 () | 6259..7269 | - | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| EC3426_RS24130 () | 7427..8185 | - | 759 | Protein_5 | site-specific integrase | - |
| EC3426_RS24135 () | 8276..9504 | + | 1229 | WP_152924612.1 | IS3 family transposase IS2 | Transposase |
| EC3426_RS24140 () | 9489..10058 | + | 570 | WP_089634947.1 | hypothetical protein | - |
| EC3426_RS24160 () | 11720..13387 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| EC3426_RS27140 () | 13500..13673 | + | 174 | Protein_9 | pilus protein | - |
| EC3426_RS24170 () | 13758..14321 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| EC3426_RS24175 () | 14369..15730 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| EC3426_RS24180 () | 15782..16012 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| EC3426_RS24190 () | 17409..19076 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| EC3426_RS24195 () | 19390..19581 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| EC3426_RS24200 () | 19578..20000 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| EC3426_RS24205 () | 20047..20349 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| EC3426_RS24215 () | 20889..21665 | - | 777 | WP_197731073.1 | hypothetical protein | - |
| EC3426_RS24220 () | 21716..22150 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| EC3426_RS24225 () | 22164..22385 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| EC3426_RS24230 () | 22386..23069 | - | 684 | WP_000086185.1 | DNA methylase | - |
| EC3426_RS24235 () | 23146..23450 | - | 305 | Protein_21 | hypothetical protein | - |
| EC3426_RS24240 () | 23454..24356 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| EC3426_RS24255 () | 25223..26194 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EC3426_RS24260 () | 26194..27360 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| EC3426_RS24265 () | 27948..28703 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| EC3426_RS24270 () | 29477..30283 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| EC3426_RS24275 () | 30284..30589 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EC3426_RS24280 () | 30591..30809 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EC3426_RS24285 () | 31443..31640 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| EC3426_RS24290 () | 31637..31921 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| EC3426_RS24295 () | 31941..33074 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| EC3426_RS24300 () | 33337..36456 | - | 3120 | WP_001553851.1 | hypothetical protein | - |
| EC3426_RS24310 () | 36763..36993 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EC3426_RS24315 () | 36990..37406 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EC3426_RS24320 () | 37568..39706 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| EC3426_RS24325 () | 40250..40947 | + | 698 | Protein_36 | IS1 family transposase | - |
| EC3426_RS24330 () | 40984..41943 | + | 960 | WP_133963875.1 | nucleotidyltransferase | - |
| EC3426_RS24335 () | 41947..42879 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| EC3426_RS24340 () | 43016..43713 | - | 698 | Protein_39 | IS1 family transposase IS1G | Transposase |
| EC3426_RS24345 () | 43927..47043 | - | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| EC3426_RS24350 () | 47165..48448 | - | 1284 | WP_001553855.1 | restriction endonuclease subunit S | - |
| EC3426_RS24355 () | 48445..50001 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| EC3426_RS24360 () | 50184..50405 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| EC3426_RS24365 () | 50405..50785 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| EC3426_RS24370 () | 50790..50969 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| EC3426_RS24375 () | 50997..51356 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| EC3426_RS24380 () | 51280..51693 | + | 414 | Protein_47 | IS3 family transposase ISLad1 | Transposase |
| EC3426_RS24385 () | 51643..51960 | - | 318 | WP_001513659.1 | hypothetical protein | - |
| EC3426_RS24390 () | 52188..53204 | - | 1017 | WP_012372828.1 | IS5 family transposase IS5D | Transposase |
| EC3426_RS24395 () | 53412..54815 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| EC3426_RS24400 () | 54802..55734 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| EC3426_RS24405 () | 55843..56172 | - | 330 | Protein_52 | TOBE domain-containing protein | - |
| EC3426_RS24410 () | 56188..56885 | - | 698 | Protein_53 | IS1 family transposase | - |
| EC3426_RS27145 () | 57372..57767 | - | 396 | WP_175188304.1 | hypothetical protein | - |
| EC3426_RS24425 () | 58888..59865 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| EC3426_RS24430 () | 60150..60890 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| EC3426_RS24435 () | 61011..61193 | - | 183 | WP_050488504.1 | hypothetical protein | - |
| EC3426_RS24440 () | 61260..61421 | - | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EC3426_RS24445 () | 61537..61793 | - | 257 | Protein_59 | type II toxin-antitoxin system ParD family antitoxin | - |
| EC3426_RS24455 () | 62325..63494 | + | 1170 | WP_001403369.1 | hypothetical protein | - |
| EC3426_RS24460 () | 63527..63655 | + | 129 | Protein_61 | IS481 family transposase | - |
| EC3426_RS24465 () | 63690..63983 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| EC3426_RS24470 () | 64089..64364 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EC3426_RS24475 () | 64364..64648 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EC3426_RS24480 () | 65253..65720 | + | 468 | Protein_65 | IclR family transcriptional regulator | - |
| EC3426_RS24485 () | 65783..66487 | + | 705 | WP_098986935.1 | IS6 family transposase IS26 | Transposase |
| EC3426_RS24495 () | 66653..66811 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| EC3426_RS24500 () | 66801..67307 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| EC3426_RS24505 () | 67365..68062 | - | 698 | Protein_69 | IS1-like element IS1A family transposase | - |
| EC3426_RS24510 () | 68266..69081 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| EC3426_RS24520 () | 69428..71314 | + | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| EC3426_RS24525 () | 71355..71882 | + | 528 | WP_000178050.1 | iron transporter | - |
| EC3426_RS24530 () | 71986..73365 | + | 1380 | WP_033553992.1 | DUF2318 domain-containing protein | - |
| EC3426_RS24535 () | 73368..74651 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| EC3426_RS24540 () | 74641..75771 | + | 1131 | WP_000729219.1 | ABC transporter permease | - |
| EC3426_RS24545 () | 75776..76471 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| EC3426_RS24550 () | 76458..76943 | + | 486 | WP_001554949.1 | TlpA family protein disulfide reductase | - |
| EC3426_RS24555 () | 76968..77453 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| EC3426_RS24560 () | 77575..77835 | + | 261 | Protein_79 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| EC3426_RS24565 () | 77889..78593 | - | 705 | WP_098986935.1 | IS6 family transposase IS26 | Transposase |
| EC3426_RS24570 () | 78784..79497 | - | 714 | WP_033553771.1 | Protein SapB | VF |
| EC3426_RS24575 () | 79561..80580 | - | 1020 | WP_024200979.1 | nucleoside hydrolase | - |
| EC3426_RS24580 () | 80555..81586 | - | 1032 | WP_001402895.1 | LacI family transcriptional regulator | - |
| EC3426_RS24585 () | 81692..83086 | - | 1395 | WP_001402894.1 | MHS family MFS transporter | - |
| EC3426_RS24590 () | 83284..83415 | - | 132 | Protein_85 | Recombination-promoting nuclease RpnD | VF |
| EC3426_RS24595 () | 83688..84068 | + | 381 | WP_032269702.1 | aspartate 1-decarboxylase | - |
| EC3426_RS24600 () | 84075..84254 | - | 180 | Protein_87 | polysaccharide deacetylase family protein | - |
| EC3426_RS24605 () | 84330..84837 | - | 508 | Protein_88 | IS3 family transposase IS2 | Transposase |
| EC3426_RS24610 () | 84934..86553 | + | 1620 | WP_077885511.1 | ISL3 family transposase ISEc38 | Transposase |
| EC3426_RS24615 () | 86602..86735 | + | 134 | Protein_90 | phosphate-starvation-inducible protein PsiE | - |
| EC3426_RS24620 () | 86810..88261 | - | 1452 | WP_001403463.1 | Na+/H+ antiporter NhaC | - |
| EC3426_RS24625 () | 88254..89432 | - | 1179 | WP_001403462.1 | pyridoxal phosphate-dependent aminotransferase | - |
| EC3426_RS24630 () | 89906..90645 | + | 740 | Protein_93 | IS3 family transposase IS629 | Transposase |
| EC3426_RS24640 () | 91318..92826 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| EC3426_RS24645 () | 92910..93035 | + | 126 | Protein_95 | IS3 family transposase | - |
| EC3426_RS24650 () | 93071..94284 | + | 1214 | WP_096858452.1 | IS3 family transposase ISCfr6 | Transposase |
| EC3426_RS24655 () | 94360..95358 | - | 999 | WP_023063783.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| EC3426_RS24660 () | 95510..96217 | + | 708 | WP_002431139.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| EC3426_RS24665 () | 96250..97551 | + | 1302 | WP_023063782.1 | four-carbon acid sugar kinase family protein | - |
| EC3426_RS24670 () | 97574..98572 | + | 999 | WP_000803224.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| EC3426_RS24675 () | 98611..100161 | + | 1551 | WP_133963877.1 | GntP family permease | - |
| EC3426_RS24680 () | 100470..100889 | + | 420 | WP_000435405.1 | IS66 family transposase IS682 | Transposase |
| EC3426_RS24690 () | 100938..101412 | - | 475 | Protein_103 | IS3 family transposase IS629 | Transposase |
| EC3426_RS24695 () | 101502..103010 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| EC3426_RS24705 () | 103683..103853 | - | 171 | Protein_105 | IS3 family transposase | - |
| EC3426_RS24710 () | 103917..104621 | + | 705 | WP_098986935.1 | IS6 family transposase IS26 | Transposase |
| EC3426_RS24715 () | 104850..105455 | - | 606 | Protein_107 | IS110 family transposase IS1618 | Transposase |
| EC3426_RS24720 () | 105480..108467 | - | 2988 | WP_133963879.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| EC3426_RS24725 () | 108635..109276 | + | 642 | WP_015057124.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| EC3426_RS24730 () | 109370..110623 | - | 1254 | WP_015057125.1 | starvation-sensing protein rspA | - |
| EC3426_RS24735 () | 110961..111728 | + | 768 | WP_015057126.1 | 5-keto-D-gluconate 5-reductase | VF |
| EC3426_RS24740 () | 111812..113173 | + | 1362 | WP_097514772.1 | D-galactonate transporter | VF |
| EC3426_RS24745 () | 113142..114233 | + | 1092 | WP_096918009.1 | L-idonate 5-dehydrogenase | - |
| EC3426_RS24750 () | 114324..115043 | + | 720 | WP_015057129.1 | FadR family transcriptional regulator | - |
| EC3426_RS24755 () | 115262..115681 | - | 420 | Protein_115 | IS110 family transposase IS1618 | Transposase |
| EC3426_RS24760 () | 115841..116323 | - | 483 | WP_001402899.1 | hypothetical protein | - |
| EC3426_RS24765 () | 116440..117021 | - | 582 | Protein_117 | 3'-5' exonuclease | - |
| EC3426_RS24770 () | 117227..118237 | + | 1011 | WP_089634347.1 | IS110 family transposase IS1663 | Transposase |
| EC3426_RS24780 () | 119227..120084 | - | 858 | WP_029702152.1 | incFII family plasmid replication initiator RepA | - |
| EC3426_RS24785 () | 120077..120151 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EC3426_RS24795 () | 120387..120644 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| EC3426_RS24800 () | 120928..121134 | - | 207 | WP_032215358.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 121121..121182 | + | 62 | NuclAT_1 | - | - |
| - () | 121121..121182 | + | 62 | NuclAT_1 | - | - |
| - () | 121121..121182 | + | 62 | NuclAT_1 | - | - |
| - () | 121121..121182 | + | 62 | NuclAT_1 | - | - |
| EC3426_RS27150 () | 121321..121587 | - | 267 | WP_087757657.1 | hypothetical protein | - |
| EC3426_RS24815 () | 121962..122531 | - | 570 | WP_029702150.1 | DUF2726 domain-containing protein | - |
| EC3426_RS24820 () | 122683..123309 | - | 627 | WP_029702149.1 | hypothetical protein | - |
| EC3426_RS24825 () | 123721..123930 | - | 210 | WP_039023209.1 | hypothetical protein | - |
| EC3426_RS24830 () | 124061..124621 | - | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| EC3426_RS24835 () | 124676..125422 | - | 747 | WP_052273601.1 | conjugal transfer pilus acetylase TraX | - |
| EC3426_RS24840 () | 125450..126196 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| EC3426_RS24845 () | 126211..127750 | - | 1540 | Protein_130 | IS21 family transposase ISEc12 | Transposase |
| EC3426_RS24850 () | 128008..128370 | - | 363 | WP_071550055.1 | P-type conjugative transfer protein TrbJ | - |
| EC3426_RS24855 () | 128300..128845 | - | 546 | WP_016236310.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EC3426_RS24860 () | 128832..129116 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EC3426_RS24865 () | 129235..129582 | - | 348 | WP_001287894.1 | conjugal transfer protein TrbA | - |
| EC3426_RS24870 () | 129598..130341 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EC3426_RS24875 () | 130334..130591 | - | 258 | WP_133963881.1 | conjugal transfer protein TrbE | - |
| EC3426_RS24880 () | 130618..132426 | - | 1809 | WP_039023153.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EC3426_RS24885 () | 132423..133061 | - | 639 | WP_001553832.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EC3426_RS24890 () | 133070..134062 | - | 993 | WP_001553833.1 | conjugal transfer pilus assembly protein TraU | - |
| EC3426_RS24895 () | 134059..134691 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| EC3426_RS24900 () | 134688..135074 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| EC3426_RS24905 () | 135071..137698 | - | 2628 | WP_001064264.1 | type IV secretion system protein TraC | - |
| EC3426_RS24910 () | 137858..138079 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| EC3426_RS24915 () | 138214..138729 | - | 516 | WP_000809832.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EC3426_RS24920 () | 138726..138977 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| EC3426_RS24925 () | 138970..139131 | - | 162 | WP_000741714.1 | conjugal transfer protein TrbD | - |
| EC3426_RS24930 () | 139153..139290 | - | 138 | WP_001553834.1 | conjugal transfer protein TrbD | - |
| EC3426_RS24935 () | 139277..139867 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| EC3426_RS24940 () | 139857..141284 | - | 1428 | WP_001553836.1 | conjugal transfer protein TraB | - |
| EC3426_RS24945 () | 141284..141988 | - | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| EC3426_RS24950 () | 141999..142565 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| EC3426_RS24955 () | 142587..142898 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| EC3426_RS24960 () | 142913..143278 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| EC3426_RS24965 () | 143321..143536 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| EC3426_RS24970 () | 143672..144319 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| EC3426_RS24975 () | 144510..144893 | - | 384 | WP_133963883.1 | relaxosome protein TraM | - |
| EC3426_RS24980 () | 145263..145835 | + | 573 | WP_000949660.1 | hypothetical protein | VF |
| EC3426_RS24985 () | 146131..146952 | - | 822 | WP_001234465.1 | DUF945 domain-containing protein | - |
| EC3426_RS24990 () | 147071..147358 | - | 288 | WP_000107242.1 | hypothetical protein | - |
| EC3426_RS27035 () | 147383..147589 | - | 207 | WP_000275854.1 | hypothetical protein | - |
| EC3426_RS25000 () | 148257..148415 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 148480..148678 | - | 199 | NuclAT_0 | - | - |
| - () | 148480..148678 | - | 199 | NuclAT_0 | - | - |
| - () | 148480..148678 | - | 199 | NuclAT_0 | - | - |
| - () | 148480..148678 | - | 199 | NuclAT_0 | - | - |
| EC3426_RS25005 () | 148647..148752 | - | 106 | Protein_162 | plasmid SOS inhibition protein A | - |
| EC3426_RS25010 () | 148907..149224 | + | 318 | Protein_163 | IS110 family transposase IS1618 | Transposase |
| EC3426_RS25015 () | 149513..149764 | - | 252 | Protein_164 | iron-containing alcohol dehydrogenase | - |
| EC3426_RS25020 () | 149849..150472 | - | 624 | WP_000912556.1 | potassium channel family protein | - |
| EC3426_RS25025 () | 150488..151181 | - | 694 | Protein_166 | IS1 family transposase IS1A | Transposase |
| EC3426_RS25030 () | 151238..151342 | + | 105 | Protein_167 | thiosulfate reductase cytochrome B subunit | - |
| EC3426_RS25040 () | 151588..152982 | - | 1395 | WP_001037799.1 | carbohydrate porin | - |
| EC3426_RS25045 () | 153177..154610 | - | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| EC3426_RS25050 () | 154607..155884 | - | 1278 | WP_001083369.1 | MFS transporter | - |
| EC3426_RS25055 () | 155947..158073 | - | 2127 | WP_000253905.1 | alpha-galactosidase | - |
| EC3426_RS25060 () | 158169..159179 | - | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| EC3426_RS25065 () | 159337..160095 | - | 759 | Protein_173 | site-specific integrase | - |
| EC3426_RS25070 () | 160186..161414 | + | 1229 | WP_152924612.1 | IS3 family transposase IS2 | Transposase |
| EC3426_RS25075 () | 161399..161968 | + | 570 | WP_089634947.1 | hypothetical protein | - |
| EC3426_RS27155 () | 163626..164476 | + | 851 | Protein_176 | reverse transcriptase N-terminal domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|