MGE detailed information
MGE type: Genomic_island MGE length: 11672 bp
Accession: NZ_CP122625 Location: 605705..617376 Organism: Escherichia coli strain ETEC4089 Replicon: chromosome
Accession: NZ_CP122625 Location: 605705..617376 Organism: Escherichia coli strain ETEC4089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW64_RS02925 (600706) | 600706..601140 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| QDW64_RS02930 (601158) | 601158..602036 | - | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| QDW64_RS02935 (602026) | 602026..602805 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| QDW64_RS02940 (602816) | 602816..603289 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| QDW64_RS02945 (603312) | 603312..604592 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| QDW64_RS02950 (604841) | 604841..605650 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| QDW64_RS02955 (605705) | 605705..606169 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| QDW64_RS02960 (606169) | 606169..606504 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| QDW64_RS02965 (606653) | 606653..608224 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| QDW64_RS02970 (608599) | 608599..609933 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| QDW64_RS02975 (609949) | 609949..610719 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| QDW64_RS02980 (610749) | 610749..611639 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| QDW64_RS02985 (611736) | 611736..612881 | + | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| QDW64_RS02995 (613903) | 613903..615090 | - | 1188 | WP_049253626.1 | YhaC family protein | - |
| QDW64_RS03000 (615112) | 615112..615650 | - | 539 | Protein_586 | protein YhaB | - |
| QDW64_RS03005 (615906) | 615906..616124 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| QDW64_RS03010 (616438) | 616438..617376 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| QDW64_RS03015 (617475) | 617475..618464 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| QDW64_RS03020 (618486) | 618486..619817 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| QDW64_RS03025 (619843) | 619843..621051 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.008 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.008 |