MGE detailed information
MGE type: Genomic_island MGE length: 11673 bp
Accession: NZ_CP109601 Location: 671829..683501 Organism: Escherichia coli strain TL-14 Replicon: chromosome
Accession: NZ_CP109601 Location: 671829..683501 Organism: Escherichia coli strain TL-14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OGV15_RS03240 (666830) | 666830..667264 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| OGV15_RS03245 (667282) | 667282..668160 | - | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| OGV15_RS03250 (668150) | 668150..668929 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| OGV15_RS03255 (668940) | 668940..669413 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| OGV15_RS03260 (669436) | 669436..670716 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| OGV15_RS03265 (670965) | 670965..671774 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| OGV15_RS03270 (671829) | 671829..672293 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| OGV15_RS03275 (672293) | 672293..672628 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| OGV15_RS03280 (672777) | 672777..674348 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| OGV15_RS03285 (674723) | 674723..676057 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| OGV15_RS03290 (676073) | 676073..676843 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| OGV15_RS03295 (676873) | 676873..677763 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| OGV15_RS03300 (677860) | 677860..679005 | + | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| OGV15_RS03310 (680028) | 680028..681215 | - | 1188 | WP_049253626.1 | YhaC family protein | - |
| OGV15_RS03315 (681237) | 681237..681775 | - | 539 | Protein_649 | hypothetical protein | - |
| OGV15_RS03320 (682031) | 682031..682249 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| OGV15_RS03325 (682563) | 682563..683501 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| OGV15_RS03330 (683600) | 683600..684589 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| OGV15_RS03335 (684611) | 684611..685942 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| OGV15_RS03340 (685968) | 685968..687176 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.008 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.008 |