MGE detailed information
MGE type: Genomic_island MGE length: 11559 bp
Accession: NZ_CP103694 Location: 612124..623682 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Accession: NZ_CP103694 Location: 612124..623682 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T31_RS02945 (607125) | 607125..607559 | - | 435 | WP_058905827.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| M5T31_RS02950 (607577) | 607577..608455 | - | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| M5T31_RS02955 (608445) | 608445..609224 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| M5T31_RS02960 (609235) | 609235..609708 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| M5T31_RS02965 (609731) | 609731..611011 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| M5T31_RS02970 (611260) | 611260..612069 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| M5T31_RS02975 (612124) | 612124..612588 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| M5T31_RS02980 (612588) | 612588..612923 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| M5T31_RS02985 (613072) | 613072..614643 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| M5T31_RS02990 (615018) | 615018..616352 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| M5T31_RS02995 (616368) | 616368..617138 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| M5T31_RS03000 (617168) | 617168..618058 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| M5T31_RS03005 (618155) | 618155..619300 | + | 1146 | WP_058905828.1 | glycerate 2-kinase | - |
| M5T31_RS03015 (620210) | 620210..621397 | - | 1188 | WP_024238569.1 | YhaC family protein | - |
| M5T31_RS03020 (621418) | 621418..621956 | - | 539 | Protein_591 | hypothetical protein | - |
| M5T31_RS03025 (622212) | 622212..622430 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| M5T31_RS03030 (622744) | 622744..623682 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| M5T31_RS03035 (623781) | 623781..624770 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| M5T31_RS03040 (624792) | 624792..626123 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| M5T31_RS03045 (626149) | 626149..627357 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.008 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.008 |