MGE detailed information
MGE type: Prophage MGE length: 40359 bp
Accession: NZ_CP097881 Location: 2218488..2258846 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP097881 Location: 2218488..2258846 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NAG69_RS10675 (2214387) | 2214387..2215607 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| NAG69_RS10680 (2215732) | 2215732..2216427 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| NAG69_RS10685 (2216380) | 2216380..2217672 | - | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| NAG69_RS10690 (2217831) | 2217831..2218445 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| NAG69_RS10695 (2218488) | 2218488..2219342 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| NAG69_RS10700 (2219344) | 2219344..2219961 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| NAG69_RS10705 (2219972) | 2219972..2222395 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NAG69_RS10710 (2222456) | 2222456..2224882 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NAG69_RS10715 (2225081) | 2225081..2225386 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| NAG69_RS10720 (2225494) | 2225494..2226204 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| NAG69_RS10725 (2226207) | 2226207..2226767 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| NAG69_RS10730 (2226802) | 2226802..2227143 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| NAG69_RS10735 (2227278) | 2227278..2227604 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| NAG69_RS10740 (2227810) | 2227810..2229024 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| NAG69_RS10745 (2229036) | 2229036..2230055 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| NAG69_RS10750 (2230243) | 2230243..2231400 | - | 1158 | Protein_2098 | Putative defective protein IntQ ; Integrase | Integrase |
| NAG69_RS10755 (2231414) | 2231414..2232109 | - | 696 | Protein_2099 | IS3 family transposase IS2 | Transposase |
| NAG69_RS10760 (2232106) | 2232106..2232873 | - | 768 | Protein_2100 | exonuclease | - |
| NAG69_RS10765 (2232966) | 2232966..2233157 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| NAG69_RS10770 (2233154) | 2233154..2233342 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NAG69_RS10775 (2233910) | 2233910..2234128 | - | 219 | WP_001171942.1 | protein YdfC | - |
| NAG69_RS10780 (2234158) | 2234158..2234286 | - | 129 | WP_000344964.1 | protein YdfB | - |
| NAG69_RS10785 (2234288) | 2234288..2234443 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| NAG69_RS10790 (2234610) | 2234610..2235017 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| NAG69_RS10795 (2235101) | 2235101..2235331 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| NAG69_RS10800 (2235315) | 2235315..2235593 | + | 279 | Protein_2108 | hypothetical protein | - |
| NAG69_RS10805 (2235628) | 2235628..2235777 | + | 150 | WP_011443592.1 | protein YdfW | - |
| NAG69_RS10810 (2236214) | 2236214..2236546 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| NAG69_RS10815 (2236749) | 2236749..2237054 | - | 306 | WP_001326990.1 | protein YdfV | - |
| NAG69_RS10820 (2237079) | 2237079..2237318 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NAG69_RS10825 (2237318) | 2237318..2237605 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NAG69_RS10830 (2237677) | 2237677..2237832 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NAG69_RS10835 (2238049) | 2238049..2238300 | + | 252 | WP_000980994.1 | protein Rem | - |
| NAG69_RS10840 (2238367) | 2238367..2238645 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| NAG69_RS10845 (2238647) | 2238647..2239696 | + | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| NAG69_RS10850 (2239710) | 2239710..2240462 | + | 753 | WP_001047135.1 | antitermination protein | - |
| NAG69_RS10855 (2240740) | 2240740..2240829 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| NAG69_RS10860 (2240884) | 2240884..2241096 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NAG69_RS10865 (2241397) | 2241397..2241612 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NAG69_RS10870 (2241976) | 2241976..2242146 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NAG69_RS10875 (2242366) | 2242366..2242581 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| NAG69_RS10880 (2242586) | 2242586..2242897 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| NAG69_RS10885 (2242894) | 2242894..2243427 | + | 534 | WP_001092971.1 | lysozyme | - |
| NAG69_RS10890 (2243424) | 2243424..2243921 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| NAG69_RS10895 (2244284) | 2244284..2244496 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NAG69_RS10900 (2244507) | 2244507..2244695 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| NAG69_RS10905 (2244698) | 2244698..2244763 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| NAG69_RS10910 (2244842) | 2244842..2244997 | + | 156 | WP_001309517.1 | protein YnfN | - |
| NAG69_RS10915 (2245169) | 2245169..2245342 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| NAG69_RS10920 (2245494) | 2245494..2245904 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| NAG69_RS10925 (2245962) | 2245962..2246195 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| NAG69_RS10930 (2246584) | 2246584..2247153 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| NAG69_RS10935 (2247104) | 2247104..2248066 | + | 963 | WP_001027733.1 | phage tail protein | - |
| NAG69_RS10940 (2248066) | 2248066..2248641 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| NAG69_RS10945 (2248739) | 2248739..2249329 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NAG69_RS10950 (2249646) | 2249646..2249879 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NAG69_RS10955 (2249948) | 2249948..2250061 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NAG69_RS10960 (2250582) | 2250582..2251949 | + | 1368 | Protein_2140 | MHS family MFS transporter | - |
| NAG69_RS10965 (2252038) | 2252038..2253498 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| NAG69_RS10970 (2253533) | 2253533..2253736 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| NAG69_RS10975 (2253913) | 2253913..2254599 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| NAG69_RS10980 (2254688) | 2254688..2255434 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| NAG69_RS10985 (2255571) | 2255571..2257616 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| NAG69_RS10990 (2257660) | 2257660..2258178 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| NAG69_RS10995 (2258454) | 2258454..2258846 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| NAG69_RS11000 (2259101) | 2259101..2259991 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| NAG69_RS11005 (2260106) | 2260106..2260210 | - | 105 | WP_211180496.1 | protein MgtT | - |
| NAG69_RS11010 (2260210) | 2260210..2260305 | - | 96 | WP_000901367.1 | protein MgtS | - |
| NAG69_RS11015 (2260432) | 2260432..2261619 | - | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| NAG69_RS11020 (2261814) | 2261814..2262713 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| NAG69_RS11025 (2262744) | 2262744..2262962 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| NAG69_RS11030 (2262994) | 2262994..2263377 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| NAG69_RS11035 (2263397) | 2263397..2263831 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.004 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.005 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.004 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.004 | |
| Escherichia coli C | Prophage | TA75071 | NZ_CP020543 | 2249542..2301270 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.004 |