MGE detailed information
MGE type: Conjugative plasmid MGE length: 149410 bp
Accession: NZ_CP076277 Location: 1..149410 Organism: Escherichia coli strain SA31-1 Replicon: plasmid pSA31IncF
Accession: NZ_CP076277 Location: 1..149410 Organism: Escherichia coli strain SA31-1 Replicon: plasmid pSA31IncF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A21_RS23715 (3254) | 3254..4090 | - | 837 | WP_257115055.1 | Right origin-binding protein | VF |
| A7A21_RS23720 (4405) | 4405..5435 | - | 1031 | Protein_2 | IS3 family transposase | - |
| A7A21_RS23725 (5836) | 5836..6850 | + | 1015 | Protein_3 | integrase core domain-containing protein | - |
| A7A21_RS23735 (7652) | 7652..8599 | + | 948 | WP_257115031.1 | DMT family transporter | - |
| A7A21_RS23740 (8940) | 8940..9095 | + | 156 | Protein_5 | IS110 family transposase | - |
| A7A21_RS23745 (9356) | 9356..12364 | - | 3009 | Protein_6 | Tn3 family transposase ISEc63 | Transposase |
| A7A21_RS23750 (12528) | 12528..13079 | + | 552 | WP_053516395.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| A7A21_RS23755 (13330) | 13330..13539 | + | 210 | WP_072072310.1 | microcin B17 family TOMM | - |
| A7A21_RS23760 (13598) | 13598..14452 | + | 855 | WP_053516397.1 | McbB family protein | - |
| A7A21_RS23765 (14454) | 14454..15260 | + | 807 | WP_257115032.1 | SagB/ThcOx family dehydrogenase | - |
| A7A21_RS23770 (15253) | 15253..16440 | + | 1188 | WP_053516415.1 | YcaO-like family protein | - |
| A7A21_RS23775 (16450) | 16450..17175 | + | 726 | WP_160521638.1 | protein mcbE | - |
| A7A21_RS23780 (17172) | 17172..17900 | + | 729 | WP_065809879.1 | ATP-binding cassette domain-containing protein | - |
| A7A21_RS23785 (17904) | 17904..18464 | + | 561 | WP_064181638.1 | pentapeptide repeat-containing protein | - |
| A7A21_RS23790 (19015) | 19015..19266 | - | 252 | WP_001315600.1 | HTH domain-containing protein | - |
| A7A21_RS23795 (19704) | 19704..21881 | - | 2178 | WP_257115034.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| A7A21_RS23800 (21881) | 21881..23134 | - | 1254 | WP_257115056.1 | HlyD family secretion protein | - |
| A7A21_RS23805 (23218) | 23218..23826 | - | 609 | WP_257115035.1 | type II CAAX endopeptidase family protein | - |
| A7A21_RS23810 (24066) | 24066..24431 | - | 366 | WP_220393360.1 | hypothetical protein | - |
| A7A21_RS23815 (24564) | 24564..25217 | - | 654 | WP_257115036.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| A7A21_RS23820 (25386) | 25386..28373 | + | 2988 | WP_257115037.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| A7A21_RS23825 (28972) | 28972..30246 | + | 1275 | WP_257115038.1 | HlyD family secretion protein | - |
| A7A21_RS23830 (30239) | 30239..32335 | + | 2097 | WP_257115040.1 | peptidase domain-containing ABC transporter | - |
| A7A21_RS23835 (32505) | 32505..32816 | - | 312 | WP_001259758.1 | colicin V | - |
| A7A21_RS23840 (32794) | 32794..33030 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| A7A21_RS23845 (33555) | 33555..33689 | - | 135 | WP_225381043.1 | colicin release lysis protein | - |
| A7A21_RS23850 (33734) | 33734..34948 | - | 1215 | Protein_27 | IS66 family transposase ISEc8 | Transposase |
| A7A21_RS23855 (35105) | 35105..35362 | - | 258 | WP_000523383.1 | cloacin immunity family protein | - |
| A7A21_RS23860 (35372) | 35372..35527 | - | 156 | Protein_29 | colicin E3/pyocin S6 family cytotoxin | - |
| A7A21_RS23865 (35765) | 35765..36013 | - | 249 | WP_257115041.1 | hypothetical protein | - |
| A7A21_RS23870 (36108) | 36108..36383 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A7A21_RS23875 (36383) | 36383..36667 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| A7A21_RS23880 (37580) | 37580..38437 | - | 858 | WP_000131011.1 | incFII family plasmid replication initiator RepA | - |
| A7A21_RS23885 (38430) | 38430..38504 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| A7A21_RS23890 (38553) | 38553..38678 | + | 126 | WP_001436741.1 | hypothetical protein | - |
| A7A21_RS23895 (38751) | 38751..38999 | - | 249 | WP_257115042.1 | replication regulatory protein RepA | - |
| A7A21_RS23900 (39283) | 39283..39432 | - | 150 | WP_001300273.1 | Hok/Gef family protein | Toxin Detail |
| - (39476) | 39476..39537 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (39476) | 39476..39537 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (39476) | 39476..39537 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (39476) | 39476..39537 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| A7A21_RS23905 (39712) | 39712..39846 | - | 135 | WP_001058542.1 | hypothetical protein | - |
| A7A21_RS23910 (40197) | 40197..40658 | - | 462 | WP_257115043.1 | thermonuclease family protein | - |
| A7A21_RS23915 (41401) | 41401..41604 | - | 204 | WP_001327131.1 | hypothetical protein | - |
| A7A21_RS23920 (41759) | 41759..42316 | - | 558 | WP_000139319.1 | fertility inhibition protein FinO | - |
| A7A21_RS23925 (42419) | 42419..43279 | - | 861 | WP_257115044.1 | alpha/beta hydrolase | - |
| A7A21_RS23930 (43338) | 43338..44084 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| A7A21_RS23935 (44104) | 44104..45312 | - | 1209 | Protein_44 | Multifunctional conjugation protein TraI | Relaxase |
| A7A21_RS23940 (45343) | 45343..46956 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| A7A21_RS23945 (46987) | 46987..47337 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| A7A21_RS23950 (47334) | 47334..47759 | - | 426 | WP_257115045.1 | IS66 family transposase ISEc23 | Transposase |
| A7A21_RS23955 (47844) | 47844..51914 | - | 4071 | Protein_48 | Multifunctional conjugation protein TraI | Relaxase |
| A7A21_RS23960 (51996) | 51996..52223 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| A7A21_RS23965 (52223) | 52223..52621 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7A21_RS23970 (52630) | 52630..54783 | - | 2154 | WP_257115046.1 | type IV conjugative transfer system coupling protein TraD | - |
| A7A21_RS23975 (54834) | 54834..55574 | - | 741 | WP_257115047.1 | hypothetical protein | - |
| A7A21_RS23980 (55777) | 55777..56487 | - | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| A7A21_RS23985 (56540) | 56540..57037 | - | 498 | WP_137546094.1 | surface exclusion protein | - |
| A7A21_RS23990 (57062) | 57062..59881 | - | 2820 | WP_151674034.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| A7A21_RS23995 (59878) | 59878..61251 | - | 1374 | WP_094259395.1 | conjugal transfer pilus assembly protein TraH | - |
| A7A21_RS24000 (61251) | 61251..61631 | - | 381 | WP_249540839.1 | F-type conjugal transfer protein TrbF | - |
| A7A21_RS24005 (61618) | 61618..61959 | - | 342 | WP_071836811.1 | P-type conjugative transfer protein TrbJ | - |
| A7A21_RS24010 (61889) | 61889..62434 | - | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A7A21_RS24015 (62421) | 62421..62657 | - | 237 | WP_000270010.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A7A21_RS24020 (62818) | 62818..63561 | - | 744 | WP_040100298.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A7A21_RS24025 (63554) | 63554..63814 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| A7A21_RS24030 (63841) | 63841..65649 | - | 1809 | WP_257115048.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A7A21_RS24035 (65646) | 65646..66284 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A7A21_RS24040 (66293) | 66293..67285 | - | 993 | WP_040100302.1 | conjugal transfer pilus assembly protein TraU | - |
| A7A21_RS24045 (67282) | 67282..67914 | - | 633 | WP_040100303.1 | type-F conjugative transfer system protein TraW | - |
| A7A21_RS24050 (67911) | 67911..68291 | - | 381 | WP_257115050.1 | type-F conjugative transfer system protein TrbI | - |
| A7A21_RS24055 (68375) | 68375..69055 | + | 681 | WP_257115051.1 | hypothetical protein | - |
| A7A21_RS24060 (69427) | 69427..69843 | - | 417 | WP_124062645.1 | hypothetical protein | - |
| A7A21_RS24065 (69865) | 69865..72510 | - | 2646 | WP_257115052.1 | type IV secretion system protein TraC | - |
| A7A21_RS24070 (72636) | 72636..72983 | - | 348 | WP_105466875.1 | hypothetical protein | - |
| A7A21_RS24075 (72980) | 72980..73384 | - | 405 | WP_257115053.1 | hypothetical protein | - |
| A7A21_RS24080 (73381) | 73381..73599 | - | 219 | WP_001377841.1 | hypothetical protein | - |
| A7A21_RS24085 (73679) | 73679..74152 | - | 474 | WP_157943632.1 | hypothetical protein | - |
| A7A21_RS24090 (74145) | 74145..74366 | - | 222 | WP_105466872.1 | conjugal transfer protein TraR | - |
| A7A21_RS24095 (74500) | 74500..75015 | - | 516 | WP_257115054.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A7A21_RS24100 (75012) | 75012..75380 | - | 369 | WP_257115007.1 | conjugal transfer protein TrbD | - |
| A7A21_RS24105 (75319) | 75319..75909 | - | 591 | WP_257115008.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| A7A21_RS24110 (75899) | 75899..77326 | - | 1428 | WP_257115009.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| A7A21_RS24115 (77326) | 77326..78054 | - | 729 | WP_257115010.1 | type-F conjugative transfer system secretin TraK | - |
| A7A21_RS24120 (78041) | 78041..78607 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| A7A21_RS24125 (78629) | 78629..78940 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| A7A21_RS24130 (78955) | 78955..79320 | - | 366 | WP_040100313.1 | type IV conjugative transfer system pilin TraA | - |
| A7A21_RS24135 (79354) | 79354..79581 | - | 228 | WP_257115011.1 | conjugal transfer relaxosome protein TraY | - |
| A7A21_RS24140 (79719) | 79719..80390 | - | 672 | WP_040100314.1 | conjugal transfer transcriptional regulator TraJ | - |
| A7A21_RS24145 (80585) | 80585..80968 | - | 384 | WP_040100321.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A7A21_RS24150 (81292) | 81292..81894 | + | 603 | WP_000243701.1 | hypothetical protein | VF |
| A7A21_RS24155 (82190) | 82190..83011 | - | 822 | WP_257115057.1 | DUF932 domain-containing protein | - |
| A7A21_RS24160 (83130) | 83130..83416 | - | 287 | Protein_89 | hypothetical protein | - |
| A7A21_RS24165 (83441) | 83441..83647 | - | 207 | WP_032219147.1 | hypothetical protein | - |
| A7A21_RS24170 (83717) | 83717..84014 | + | 298 | Protein_91 | hypothetical protein | - |
| A7A21_RS24175 (84315) | 84315..84440 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| A7A21_RS24180 (84382) | 84382..84531 | - | 150 | Protein_93 | DUF5431 family protein | - |
| - (84538) | 84538..84736 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (84538) | 84538..84736 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (84538) | 84538..84736 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (84538) | 84538..84736 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| A7A21_RS24185 (84705) | 84705..85467 | - | 763 | Protein_94 | plasmid SOS inhibition protein A | - |
| A7A21_RS24190 (85464) | 85464..85898 | - | 435 | WP_096100127.1 | conjugation system SOS inhibitor PsiB | - |
| A7A21_RS24195 (85953) | 85953..87912 | - | 1960 | Protein_96 | ParB/RepB/Spo0J family partition protein | - |
| A7A21_RS24200 (87976) | 87976..88209 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| A7A21_RS24205 (88272) | 88272..88811 | - | 540 | WP_032219151.1 | single-stranded DNA-binding protein | - |
| A7A21_RS24210 (89112) | 89112..89570 | + | 459 | Protein_99 | hypothetical protein | - |
| A7A21_RS24215 (89658) | 89658..90221 | - | 564 | Protein_100 | class I SAM-dependent methyltransferase | - |
| A7A21_RS24220 (90268) | 90268..91629 | - | 1362 | WP_137592140.1 | DUF3560 domain-containing protein | - |
| A7A21_RS24225 (91681) | 91681..91911 | - | 231 | WP_000218647.1 | hypothetical protein | - |
| A7A21_RS24230 (92904) | 92904..93095 | - | 192 | WP_188926523.1 | hypothetical protein | - |
| A7A21_RS24235 (93095) | 93095..93514 | - | 420 | WP_188926521.1 | DUF1380 family protein | - |
| A7A21_RS24240 (93560) | 93560..93985 | - | 426 | WP_257115012.1 | antirestriction protein | - |
| A7A21_RS24245 (94402) | 94402..95181 | - | 780 | WP_257115013.1 | hypothetical protein | - |
| A7A21_RS24250 (95232) | 95232..95666 | - | 435 | WP_000274480.1 | DUF1380 family protein | - |
| A7A21_RS24255 (95680) | 95680..95901 | - | 222 | WP_001104883.1 | hypothetical protein | - |
| A7A21_RS24260 (95902) | 95902..96584 | - | 683 | Protein_109 | DNA methylase | - |
| A7A21_RS24265 (96660) | 96660..96965 | - | 306 | Protein_110 | hypothetical protein | - |
| A7A21_RS24270 (97020) | 97020..97478 | - | 459 | Protein_111 | DUF1281 domain-containing protein | - |
| A7A21_RS24275 (98548) | 98548..99519 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A7A21_RS24280 (99519) | 99519..100685 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| A7A21_RS24285 (101273) | 101273..102028 | - | 756 | WP_000852143.1 | replication initiation protein RepE | - |
| A7A21_RS24290 (102761) | 102761..103569 | - | 809 | Protein_115 | site-specific integrase | - |
| A7A21_RS24295 (103570) | 103570..103875 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A7A21_RS24300 (103877) | 103877..104095 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A7A21_RS24305 (104665) | 104665..105753 | + | 1089 | WP_257115058.1 | transcriptional repressor PifC | - |
| A7A21_RS24310 (105755) | 105755..107185 | + | 1431 | WP_251003572.1 | P-loop NTPase fold protein | - |
| A7A21_RS24315 (107261) | 107261..107641 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| A7A21_RS24320 (107638) | 107638..107985 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| A7A21_RS24325 (108035) | 108035..109573 | + | 1539 | WP_257115014.1 | IS66 family transposase ISEc8 | Transposase |
| A7A21_RS24330 (109614) | 109614..109959 | + | 346 | Protein_123 | Tn3 family transposase | - |
| A7A21_RS24335 (110026) | 110026..110856 | - | 831 | WP_257115015.1 | polysaccharide deacetylase family protein | - |
| A7A21_RS24340 (112317) | 112317..113654 | + | 1338 | WP_257115016.1 | MFS transporter | - |
| A7A21_RS24345 (113665) | 113665..114000 | - | 336 | WP_257115017.1 | SMR family transporter | - |
| A7A21_RS24350 (114326) | 114326..115237 | - | 912 | WP_257115018.1 | VirK/YbjX family protein | - |
| A7A21_RS24355 (115641) | 115641..115988 | + | 348 | WP_257115019.1 | anti-adapter protein IraM | - |
| A7A21_RS24360 (116152) | 116152..117273 | + | 1122 | WP_257115020.1 | N-acetyl-alpha-D-glucosaminyl L-malate synthase | VF |
| A7A21_RS24365 (117499) | 117499..117742 | - | 244 | Protein_130 | IS3 family transposase IS911 | Transposase |
| A7A21_RS24370 (117777) | 117777..119851 | - | 2075 | Protein_131 | Tn3 family transposase | - |
| A7A21_RS24375 (119896) | 119896..120024 | + | 129 | WP_257115021.1 | IS3 family transposase ISEc24 | Transposase |
| A7A21_RS24380 (120209) | 120209..121360 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| A7A21_RS24385 (121367) | 121367..122263 | + | 897 | Protein_134 | IS3 family transposase ISSd1 | Transposase |
| A7A21_RS24390 (122444) | 122444..122710 | + | 267 | Protein_135 | IS1 family transposase | - |
| A7A21_RS24395 (122789) | 122789..123046 | - | 258 | WP_257115022.1 | biofilm development regulator YmgB/AriR family protein | - |
| A7A21_RS24400 (123567) | 123567..126203 | - | 2637 | Protein_137 | Tn3 family transposase TnpA_Tn3 | Transposase |
| A7A21_RS24405 (126484) | 126484..127458 | - | 975 | WP_257115024.1 | fimbrial protein | - |
| A7A21_RS24410 (128064) | 128064..130643 | - | 2580 | WP_257115025.1 | Outer membrane usher protein YraJ | VF |
| A7A21_RS24415 (130597) | 130597..131274 | - | 678 | WP_257115026.1 | Chaperone protein FimC | VF |
| A7A21_RS24420 (131334) | 131334..131867 | - | 534 | WP_257115027.1 | putative major fimbrial subunit LpfA | VF |
| A7A21_RS24425 (132019) | 132019..132609 | - | 591 | WP_257115028.1 | hypothetical protein | - |
| A7A21_RS24430 (132615) | 132615..133022 | - | 408 | WP_257115029.1 | hypothetical protein | - |
| A7A21_RS24435 (133729) | 133729..134223 | + | 495 | Protein_144 | IS21 family transposase | - |
| A7A21_RS24440 (134873) | 134873..135774 | + | 902 | Protein_145 | DUF4158 domain-containing protein | - |
| A7A21_RS24445 (136191) | 136191..136297 | - | 107 | Protein_146 | ATP-binding protein | - |
| A7A21_RS24450 (136409) | 136409..137560 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| A7A21_RS24455 (137625) | 137625..137804 | - | 180 | Protein_148 | IS3 family transposase | - |
| A7A21_RS24460 (137927) | 137927..138178 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| A7A21_RS24465 (138175) | 138175..138462 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A7A21_RS24470 (138464) | 138464..138875 | + | 412 | Protein_151 | DDE-type integrase/transposase/recombinase | - |
| A7A21_RS24475 (139520) | 139520..140497 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| A7A21_RS24480 (140782) | 140782..141522 | - | 741 | WP_034173276.1 | tyrosine-type recombinase/integrase | - |
| A7A21_RS24485 (141643) | 141643..141774 | - | 132 | Protein_154 | serine/threonine protein kinase | - |
| A7A21_RS24490 (142265) | 142265..143764 | - | 1500 | WP_047662411.1 | alpha/beta hydrolase | - |
| A7A21_RS24495 (143857) | 143857..144804 | - | 948 | WP_001407138.1 | Outer membrane protease OmpP | VF |
| A7A21_RS24500 (146057) | 146057..147277 | + | 1221 | WP_000040078.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|