MGE detailed information
MGE type: Genomic_island MGE length: 9947 bp
Accession: NZ_CP075737 Location: 2382156..2392102 Organism: Escherichia coli strain CPF6 Replicon: chromosome
Accession: NZ_CP075737 Location: 2382156..2392102 Organism: Escherichia coli strain CPF6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKZ13_RS11345 (2377989) | 2377989..2379320 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| KKZ13_RS11350 (2379342) | 2379342..2380331 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| KKZ13_RS11355 (2380430) | 2380430..2381368 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| KKZ13_RS11360 (2381682) | 2381682..2381900 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| KKZ13_RS11365 (2382156) | 2382156..2382694 | + | 539 | Protein_2227 | hypothetical protein | - |
| KKZ13_RS11370 (2382716) | 2382716..2383903 | + | 1188 | WP_024238569.1 | YhaC family protein | - |
| KKZ13_RS11380 (2384926) | 2384926..2386071 | - | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| KKZ13_RS11385 (2386168) | 2386168..2387058 | - | 891 | WP_089075270.1 | 2-hydroxy-3-oxopropionate reductase | - |
| KKZ13_RS11390 (2387088) | 2387088..2387858 | - | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| KKZ13_RS11395 (2387874) | 2387874..2389208 | - | 1335 | WP_089075269.1 | galactarate/glucarate/glycerate transporter GarP | - |
| KKZ13_RS11400 (2389583) | 2389583..2391154 | + | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| KKZ13_RS11405 (2391303) | 2391303..2391638 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| KKZ13_RS11410 (2391638) | 2391638..2392102 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| KKZ13_RS11415 (2392157) | 2392157..2392966 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| KKZ13_RS11420 (2393215) | 2393215..2394495 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| KKZ13_RS11425 (2394518) | 2394518..2394991 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| KKZ13_RS11430 (2395002) | 2395002..2395781 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| KKZ13_RS11435 (2395771) | 2395771..2396649 | + | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| KKZ13_RS11440 (2396667) | 2396667..2397101 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.009 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.01 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.01 |