MGE detailed information
MGE type: IS/Tn MGE length: 225 bp
Accession: NZ_CP066796 Location: 472424..472648 Organism: Erwinia amylovora strain ATCC 15580 Replicon: chromosome
Accession: NZ_CP066796 Location: 472424..472648 Organism: Erwinia amylovora strain ATCC 15580 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JGC47_RS02155 () | 468160..468402 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| JGC47_RS02160 () | 468627..469201 | + | 575 | Protein_422 | DUF932 domain-containing protein | - |
| JGC47_RS02165 () | 469272..469742 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| JGC47_RS02170 () | 469755..470078 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JGC47_RS02175 () | 470115..470435 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| JGC47_RS02180 () | 470548..471381 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| JGC47_RS02185 () | 471478..471726 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JGC47_RS02190 () | 471730..472005 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JGC47_RS02195 () | 472424..472624 | + | 201 | Protein_429 | IS3 family transposase IS1400 | Transposase |
| JGC47_RS02200 () | 472620..472772 | + | 153 | WP_004163933.1 | hypothetical protein | - |
| JGC47_RS02205 () | 472921..476286 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| JGC47_RS02210 () | 476673..477230 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | IS/Tn | TA24691, TA24692 | NC_013971 | 3301707..3301931 | 0 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | IS/Tn | TA10128, TA294492 | NZ_NQJO01000001 | 3403975..3404199 | 0 |