MGE detailed information
MGE type: Prophage MGE length: 26869 bp
Accession: NZ_CP062248 Location: 1625260..1652128 Organism: Escherichia coli strain AML002_ev02 Replicon: chromosome
Accession: NZ_CP062248 Location: 1625260..1652128 Organism: Escherichia coli strain AML002_ev02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHN47_RS07880 () | 1621775..1622521 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| IHN47_RS07885 () | 1622610..1623296 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IHN47_RS07890 () | 1623473..1623676 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IHN47_RS07895 () | 1623711..1625171 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| IHN47_RS07900 () | 1625260..1626627 | - | 1368 | Protein_1543 | MHS family MFS transporter | - |
| IHN47_RS07905 () | 1627148..1627261 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| IHN47_RS07910 () | 1627330..1627563 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IHN47_RS07915 () | 1627880..1628470 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IHN47_RS07920 () | 1628568..1629143 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| IHN47_RS07925 () | 1629143..1630105 | - | 963 | WP_001027733.1 | phage tail protein | - |
| IHN47_RS07930 () | 1630056..1630625 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| IHN47_RS07935 () | 1631014..1631247 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IHN47_RS07940 () | 1631305..1631715 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IHN47_RS07945 () | 1631867..1632040 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IHN47_RS07950 () | 1632212..1632367 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| IHN47_RS07955 () | 1632446..1632511 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| IHN47_RS07960 () | 1632514..1632702 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| IHN47_RS07965 () | 1632713..1632925 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IHN47_RS07970 () | 1633288..1633785 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IHN47_RS07975 () | 1633782..1634315 | - | 534 | WP_001092971.1 | lysozyme | - |
| IHN47_RS07980 () | 1634312..1634623 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| IHN47_RS07985 () | 1634628..1634843 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IHN47_RS07990 () | 1635597..1635812 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IHN47_RS07995 () | 1636113..1636325 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IHN47_RS08000 () | 1636380..1636469 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| IHN47_RS08005 () | 1636747..1637499 | - | 753 | WP_001047135.1 | antitermination protein | - |
| IHN47_RS08010 () | 1637513..1638562 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| IHN47_RS08015 () | 1638564..1638842 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| IHN47_RS08020 () | 1638909..1639160 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| IHN47_RS08025 () | 1639377..1639532 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IHN47_RS08030 () | 1639604..1639891 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IHN47_RS08035 () | 1639891..1640130 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IHN47_RS08040 () | 1640155..1640460 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| IHN47_RS08045 () | 1640663..1640995 | + | 333 | WP_001301033.1 | protein FlxA | - |
| IHN47_RS08050 () | 1641432..1641581 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| IHN47_RS08055 () | 1641616..1641894 | - | 279 | Protein_1574 | hypothetical protein | - |
| IHN47_RS08060 () | 1641878..1642108 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| IHN47_RS08065 () | 1642192..1642599 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| IHN47_RS08070 () | 1642766..1642921 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| IHN47_RS08075 () | 1643081..1643299 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| IHN47_RS08080 () | 1643867..1644055 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| IHN47_RS08085 () | 1644052..1644243 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| IHN47_RS08090 () | 1644336..1645103 | + | 768 | Protein_1581 | exonuclease | - |
| IHN47_RS08095 () | 1645100..1645795 | + | 696 | Protein_1582 | IS3 family transposase IS2 | Transposase |
| IHN47_RS08100 () | 1645809..1646966 | + | 1158 | Protein_1583 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IHN47_RS08105 () | 1646986..1647096 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| IHN47_RS08110 () | 1647154..1648173 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IHN47_RS08115 () | 1648185..1649399 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| IHN47_RS08120 () | 1649605..1649931 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| IHN47_RS08125 () | 1650066..1650407 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IHN47_RS08130 () | 1650442..1651002 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IHN47_RS08135 () | 1651005..1651715 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| IHN47_RS08140 () | 1651823..1652128 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| IHN47_RS08145 () | 1652327..1654753 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.007 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.006 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.009 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.004 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.006 |