MGE detailed information
MGE type: Genomic_island MGE length: 12450 bp
Accession: NZ_CP061758 Location: 692893..705342 Organism: Escherichia coli O68:H12 strain 97.3 Replicon: chromosome
Accession: NZ_CP061758 Location: 692893..705342 Organism: Escherichia coli O68:H12 strain 97.3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEC98_RS03260 () | 687893..688327 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| IEC98_RS03265 () | 688345..689224 | - | 880 | Protein_646 | PTS mannose/fructose/sorbose transporter family subunit IID | - |
| IEC98_RS03270 () | 689214..689993 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| IEC98_RS03275 () | 690004..690477 | - | 474 | WP_001723937.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IEC98_RS03280 () | 690500..691780 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IEC98_RS03285 () | 692029..692838 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| IEC98_RS03290 () | 692893..693357 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IEC98_RS03295 () | 693357..693692 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IEC98_RS03300 () | 693841..695412 | - | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| IEC98_RS03305 () | 695787..697121 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| IEC98_RS03310 () | 697137..697907 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IEC98_RS03315 () | 697937..698827 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IEC98_RS03320 () | 698924..700069 | + | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| IEC98_RS03330 () | 701092..702279 | - | 1188 | WP_001723932.1 | YhaC family protein | - |
| IEC98_RS03335 () | 702301..702839 | - | 539 | Protein_659 | hypothetical protein | - |
| IEC98_RS03340 () | 703095..703205 | - | 111 | Protein_660 | DNA-binding transcriptional activator TdcR | - |
| IEC98_RS03345 () | 703221..703918 | - | 698 | Protein_661 | IS1 family transposase IS1R | Transposase |
| IEC98_RS25060 () | 703976..704089 | - | 114 | Protein_662 | DNA-binding transcriptional activator TdcR | - |
| IEC98_RS03355 () | 704404..705342 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| IEC98_RS03360 () | 705441..706430 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IEC98_RS03365 () | 706452..707783 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| IEC98_RS03370 () | 707809..709017 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.01 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.01 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.01 |