MGE detailed information
MGE type: Genomic_island MGE length: 11925 bp
Accession: NZ_CP058725 Location: 3717284..3729208 Organism: Escherichia coli strain S171-1 Replicon: chromosome
Accession: NZ_CP058725 Location: 3717284..3729208 Organism: Escherichia coli strain S171-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS87_RS18120 (3713170) | 3713170..3714261 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| HZS87_RS18125 (3714272) | 3714272..3716788 | - | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| HZS87_RS18130 (3716817) | 3716817..3716909 | - | 93 | Protein_3550 | molecular chaperone | - |
| HZS87_RS18135 (3716964) | 3716964..3717661 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HZS87_RS18140 (3717655) | 3717655..3718113 | - | 459 | WP_112921698.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HZS87_RS18145 (3718113) | 3718113..3718448 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HZS87_RS18150 (3718597) | 3718597..3720168 | - | 1572 | WP_112921699.1 | galactarate dehydratase | - |
| HZS87_RS18155 (3720543) | 3720543..3721877 | + | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HZS87_RS18160 (3721893) | 3721893..3722663 | + | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HZS87_RS18165 (3722693) | 3722693..3723583 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HZS87_RS18170 (3723680) | 3723680..3724825 | + | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| HZS87_RS18180 (3725735) | 3725735..3726922 | - | 1188 | WP_112921700.1 | YhaC family protein | - |
| HZS87_RS18185 (3726944) | 3726944..3727482 | - | 539 | Protein_3560 | protein YhaB | - |
| HZS87_RS18190 (3727738) | 3727738..3727956 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| HZS87_RS18195 (3728270) | 3728270..3729208 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HZS87_RS18200 (3729307) | 3729307..3730296 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HZS87_RS18205 (3730318) | 3730318..3731649 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HZS87_RS18210 (3731675) | 3731675..3732883 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.008 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.008 |