MGE detailed information
MGE type: Conjugative plasmid MGE length: 147240 bp
Accession: NZ_CP057221 Location: 1..147240 Organism: Escherichia fergusonii strain RHB32-C22 Replicon: plasmid pRHB32-C22_2
Accession: NZ_CP057221 Location: 1..147240 Organism: Escherichia fergusonii strain RHB32-C22 Replicon: plasmid pRHB32-C22_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVZ07_RS22065 () | 1301..2041 | - | 741 | WP_181668579.1 | tyrosine-type recombinase/integrase | - |
| HVZ07_RS22070 () | 2162..2332 | - | 171 | WP_112042731.1 | transcriptional regulator | - |
| HVZ07_RS22075 () | 3130..4563 | - | 1434 | WP_181668580.1 | Hemolysin secretion protein D, chromosomal | VF |
| HVZ07_RS22080 () | 4577..6700 | - | 2124 | WP_181668593.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| HVZ07_RS22085 () | 6764..9826 | - | 3063 | WP_181668581.1 | Hemolysin, chromosomal | VF |
| HVZ07_RS22090 () | 9837..10385 | - | 549 | WP_097419059.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| HVZ07_RS22095 () | 10962..11704 | + | 743 | Protein_7 | carbonic anhydrase family protein | - |
| HVZ07_RS22100 () | 11961..12494 | + | 534 | Protein_8 | IS21 family transposase ISSen8 | Transposase |
| HVZ07_RS22105 () | 12491..12625 | + | 135 | WP_097419060.1 | hypothetical protein | - |
| HVZ07_RS22110 () | 12677..13890 | + | 1214 | WP_181668582.1 | IS3 family transposase IS629 | Transposase |
| HVZ07_RS22115 () | 13932..15006 | - | 1075 | Protein_11 | IS21 family transposase ISEc12 | Transposase |
| HVZ07_RS22120 () | 15053..16590 | - | 1538 | Protein_12 | IS3 family transposase ISAs9 | Transposase |
| HVZ07_RS22125 () | 16927..17403 | + | 477 | WP_097419079.1 | YfdX family protein | - |
| HVZ07_RS22130 () | 17974..18555 | + | 582 | WP_097419080.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| HVZ07_RS22135 () | 19912..20007 | - | 96 | Protein_15 | transposase domain-containing protein | - |
| HVZ07_RS22140 () | 20056..20891 | - | 836 | Protein_16 | AIDA-I autotransporter | VF |
| HVZ07_RS22145 () | 20850..21994 | + | 1145 | Protein_17 | IS3 family transposase | - |
| HVZ07_RS22150 () | 22618..23460 | + | 843 | WP_112042711.1 | helix-turn-helix domain-containing protein | - |
| HVZ07_RS22155 () | 23610..24290 | + | 681 | WP_112042712.1 | EAL domain-containing protein | - |
| HVZ07_RS22160 () | 24542..25330 | + | 789 | WP_157918814.1 | Right origin-binding protein | VF |
| HVZ07_RS22165 () | 25633..25878 | + | 246 | WP_181668583.1 | IS3 family transposase ISPsy8 | Transposase |
| HVZ07_RS22170 () | 25892..26137 | - | 246 | WP_143362987.1 | hypothetical protein | - |
| HVZ07_RS22175 () | 26209..27156 | - | 948 | WP_021555106.1 | LysR family transcriptional regulator | - |
| HVZ07_RS22180 () | 27327..27992 | - | 666 | WP_097419013.1 | ParB N-terminal domain-containing protein | - |
| HVZ07_RS22185 () | 27977..29197 | - | 1221 | WP_032154595.1 | phosphoadenosine phosphosulfate reductase | - |
| HVZ07_RS22190 () | 29268..30464 | - | 1197 | WP_181668584.1 | hypothetical protein | - |
| HVZ07_RS22195 () | 30503..31090 | - | 588 | WP_097419011.1 | type 1 fimbrial protein | - |
| HVZ07_RS22200 () | 31100..33649 | - | 2550 | WP_112042714.1 | Outer membrane usher protein SfmD | VF |
| HVZ07_RS22205 () | 33659..34438 | - | 780 | WP_172906563.1 | molecular chaperone | - |
| HVZ07_RS22210 () | 34484..35167 | - | 684 | WP_181668585.1 | putative fimbrial chaperone YraI | VF |
| HVZ07_RS22215 () | 35206..35754 | - | 549 | WP_172906561.1 | fimbrial protein | - |
| HVZ07_RS22220 () | 35805..36398 | - | 594 | WP_097419006.1 | hypothetical protein | VF |
| HVZ07_RS22225 () | 36398..37114 | - | 717 | WP_097419005.1 | Chaperone protein FimC | VF |
| HVZ07_RS22230 () | 37165..37602 | - | 438 | WP_157918813.1 | hypothetical protein | - |
| HVZ07_RS22235 () | 37913..38406 | - | 494 | Protein_35 | ISKra4 family transposase ISEc51 | Transposase |
| HVZ07_RS22240 () | 38687..39690 | - | 1004 | Protein_36 | IS110 family transposase IS4321 | Transposase |
| HVZ07_RS22245 () | 40029..40358 | - | 330 | Protein_37 | IS110 family transposase | - |
| HVZ07_RS22250 () | 40401..41939 | - | 1539 | WP_053265917.1 | IS66 family transposase ISEc8 | Transposase |
| HVZ07_RS22255 () | 41989..42336 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| HVZ07_RS22260 () | 42333..42722 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| HVZ07_RS22265 () | 42815..43020 | + | 206 | Protein_41 | sulfite reductase subunit C | - |
| HVZ07_RS22270 () | 43170..47069 | - | 3900 | WP_181668586.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| HVZ07_RS22275 () | 47108..47992 | - | 885 | WP_053265915.1 | hypothetical protein | - |
| HVZ07_RS22280 () | 47970..48212 | - | 243 | WP_072135115.1 | hypothetical protein | - |
| HVZ07_RS22285 () | 48279..49850 | - | 1572 | WP_181668587.1 | IS66 family transposase ISCro1 | Transposase |
| HVZ07_RS22290 () | 49870..50217 | - | 348 | WP_053265945.1 | IS66 family transposase ISCro1 | Transposase |
| HVZ07_RS22295 () | 50217..50867 | - | 651 | WP_097419002.1 | IS66 family transposase IS679 | Transposase |
| HVZ07_RS22300 () | 51200..52540 | - | 1341 | WP_181654382.1 | sensor domain-containing diguanylate cyclase | - |
| HVZ07_RS22305 () | 52923..53360 | - | 438 | Protein_49 | tetratricopeptide repeat protein | - |
| HVZ07_RS22310 () | 53416..54629 | + | 1214 | WP_181668588.1 | IS3 family transposase IS629 | Transposase |
| HVZ07_RS22315 () | 54671..55276 | - | 606 | Protein_51 | tetratricopeptide repeat protein | - |
| HVZ07_RS22320 () | 55609..56367 | - | 759 | WP_053265824.1 | AraC family transcriptional regulator | - |
| HVZ07_RS22325 () | 56939..57046 | + | 108 | Protein_53 | IS66 family insertion sequence element accessory protein TnpB | - |
| HVZ07_RS22330 () | 57043..57375 | + | 333 | WP_181668589.1 | IS66 family transposase ISEc23 | Transposase |
| HVZ07_RS22335 () | 57425..58215 | + | 791 | Protein_55 | IS66 family transposase ISEc23 | Transposase |
| HVZ07_RS22340 () | 58410..59945 | + | 1536 | WP_042004920.1 | IS21 family transposase ISEc12 | Transposase |
| HVZ07_RS22345 () | 60033..61246 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| HVZ07_RS22350 () | 61255..62019 | + | 765 | WP_181668594.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| HVZ07_RS22355 () | 62107..62637 | + | 531 | Protein_59 | ion transporter | - |
| HVZ07_RS22360 () | 63196..64278 | - | 1083 | WP_181668590.1 | hypothetical protein | - |
| HVZ07_RS22365 () | 64338..66974 | - | 2637 | WP_049032512.1 | TcfC E-set like domain-containing protein | - |
| HVZ07_RS22370 () | 67013..67513 | - | 501 | WP_181668591.1 | CFA/I fimbrial subunit B | VF |
| HVZ07_RS22375 () | 67578..68306 | - | 729 | WP_181668592.1 | putative fimbrial chaperone EcpE | VF |
| HVZ07_RS22380 () | 69315..69680 | + | 366 | WP_097418983.1 | transposase | - |
| HVZ07_RS22385 () | 69680..70863 | + | 1184 | Protein_65 | IS91 family transposase ISEc37 | Transposase |
| HVZ07_RS22390 () | 71046..72542 | - | 1497 | Protein_66 | hypothetical protein | - |
| HVZ07_RS22395 () | 73022..73303 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HVZ07_RS22400 () | 73300..73569 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HVZ07_RS22405 () | 74483..75340 | - | 858 | WP_097418981.1 | incFII family plasmid replication initiator RepA | - |
| HVZ07_RS22410 () | 75333..75815 | - | 483 | WP_001523473.1 | hypothetical protein | - |
| HVZ07_RS22415 () | 75808..75882 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| HVZ07_RS22420 () | 76114..76371 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| HVZ07_RS22425 () | 76655..76861 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 76848..76909 | + | 62 | NuclAT_1 | - | - |
| - () | 76848..76909 | + | 62 | NuclAT_1 | - | - |
| - () | 76848..76909 | + | 62 | NuclAT_1 | - | - |
| - () | 76848..76909 | + | 62 | NuclAT_1 | - | - |
| HVZ07_RS22430 () | 77492..77704 | - | 213 | WP_097418979.1 | hypothetical protein | - |
| HVZ07_RS22435 () | 77839..78399 | - | 561 | WP_097418978.1 | fertility inhibition protein FinO | - |
| HVZ07_RS22440 () | 78454..79200 | - | 747 | WP_097418977.1 | conjugal transfer pilus acetylase TraX | - |
| HVZ07_RS22445 () | 79220..84490 | - | 5271 | WP_097418976.1 | Multifunctional conjugation protein TraI | Relaxase |
| HVZ07_RS22450 () | 84572..84799 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HVZ07_RS22455 () | 84799..85197 | + | 399 | WP_097418975.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HVZ07_RS22460 () | 85206..87359 | - | 2154 | WP_175616535.1 | type IV conjugative transfer system coupling protein TraD | - |
| HVZ07_RS22465 () | 87612..88343 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| HVZ07_RS22470 () | 88375..88872 | - | 498 | WP_038341570.1 | surface exclusion protein | - |
| HVZ07_RS22475 () | 88897..91710 | - | 2814 | WP_042973389.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HVZ07_RS22480 () | 91707..93083 | - | 1377 | WP_069892545.1 | conjugal transfer protein TraH | - |
| HVZ07_RS22485 () | 93067..93459 | - | 393 | WP_042973384.1 | F-type conjugal transfer protein TrbF | - |
| HVZ07_RS22490 () | 93413..93787 | - | 375 | WP_072034859.1 | P-type conjugative transfer protein TrbJ | - |
| HVZ07_RS22495 () | 93717..94262 | - | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HVZ07_RS22500 () | 94249..94533 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HVZ07_RS22505 () | 94614..94928 | + | 315 | WP_000415566.1 | protein ArtA | - |
| HVZ07_RS22510 () | 94930..95277 | - | 348 | WP_042973381.1 | conjugal transfer protein TrbA | - |
| HVZ07_RS22515 () | 95293..96036 | - | 744 | WP_181668573.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HVZ07_RS22520 () | 96029..96286 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| HVZ07_RS22525 () | 96313..98121 | - | 1809 | WP_042973378.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HVZ07_RS22530 () | 98118..98756 | - | 639 | WP_162756060.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HVZ07_RS22535 () | 98784..99236 | - | 453 | WP_181668574.1 | hypothetical protein | - |
| HVZ07_RS22540 () | 99229..99543 | - | 315 | WP_109866897.1 | hypothetical protein | - |
| HVZ07_RS22545 () | 99554..100018 | - | 465 | WP_096948751.1 | hypothetical protein | - |
| HVZ07_RS22550 () | 100044..101036 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| HVZ07_RS22555 () | 101033..101665 | - | 633 | WP_001203749.1 | type-F conjugative transfer system protein TraW | - |
| HVZ07_RS22560 () | 101662..102048 | - | 387 | WP_181668575.1 | type-F conjugative transfer system protein TrbI | - |
| HVZ07_RS22565 () | 102045..104672 | - | 2628 | WP_181668576.1 | type IV secretion system protein TraC | - |
| HVZ07_RS22570 () | 104832..105053 | - | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| HVZ07_RS22575 () | 105188..105703 | - | 516 | WP_016241856.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HVZ07_RS22580 () | 105700..105951 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| HVZ07_RS22585 () | 105964..106194 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| HVZ07_RS22590 () | 106148..106738 | - | 591 | WP_179808438.1 | conjugal transfer protein TraP | - |
| HVZ07_RS22595 () | 106728..108155 | - | 1428 | WP_181668577.1 | conjugal transfer protein TraB | - |
| HVZ07_RS22600 () | 108155..108859 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HVZ07_RS22605 () | 108870..109436 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HVZ07_RS22610 () | 109458..109769 | - | 312 | WP_000012125.1 | type IV conjugative transfer system protein TraL | - |
| HVZ07_RS22615 () | 109784..110176 | - | 393 | WP_024127870.1 | type IV conjugative transfer system pilin TraA | - |
| HVZ07_RS22620 () | 110210..110449 | - | 240 | WP_042357785.1 | conjugal transfer relaxosome protein TraY | - |
| HVZ07_RS22625 () | 110557..111204 | - | 648 | WP_096040777.1 | transcriptional regulator TraJ family protein | - |
| HVZ07_RS22630 () | 111396..111779 | - | 384 | WP_001151530.1 | relaxosome protein TraM | - |
| HVZ07_RS22635 () | 112055..112702 | + | 648 | WP_000601039.1 | hypothetical protein | VF |
| HVZ07_RS22640 () | 112998..113819 | - | 822 | WP_001234475.1 | DUF945 domain-containing protein | - |
| HVZ07_RS22645 () | 113938..114225 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| HVZ07_RS22650 () | 114250..114456 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| HVZ07_RS22655 () | 115124..115282 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 115347..115545 | - | 199 | NuclAT_0 | - | - |
| - () | 115347..115545 | - | 199 | NuclAT_0 | - | - |
| - () | 115347..115545 | - | 199 | NuclAT_0 | - | - |
| - () | 115347..115545 | - | 199 | NuclAT_0 | - | - |
| HVZ07_RS22660 () | 115557..116276 | - | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| HVZ07_RS22665 () | 116273..116707 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| HVZ07_RS22670 () | 116762..118720 | - | 1959 | WP_000117171.1 | ParB/RepB/Spo0J family partition protein | - |
| HVZ07_RS22675 () | 118786..119019 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| HVZ07_RS22680 () | 119076..119615 | - | 540 | WP_000290799.1 | single-stranded DNA-binding protein | - |
| HVZ07_RS22685 () | 120415..120606 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| HVZ07_RS22690 () | 120603..121025 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| HVZ07_RS22695 () | 121072..121374 | - | 303 | WP_072095193.1 | antirestriction protein | - |
| HVZ07_RS22700 () | 121910..122686 | - | 777 | WP_001005032.1 | hypothetical protein | - |
| HVZ07_RS22705 () | 122732..123286 | - | 555 | WP_181668578.1 | DUF1380 family protein | - |
| HVZ07_RS22710 () | 123180..123401 | - | 222 | WP_001104904.1 | hypothetical protein | - |
| HVZ07_RS22715 () | 123402..124085 | - | 684 | WP_000085939.1 | DNA methylase | - |
| HVZ07_RS22720 () | 124162..124467 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| HVZ07_RS22725 () | 124471..125372 | - | 902 | Protein_133 | DUF1281 domain-containing protein | - |
| HVZ07_RS22730 () | 126110..127081 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HVZ07_RS22735 () | 127081..128247 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HVZ07_RS22740 () | 128835..129590 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HVZ07_RS22745 () | 130241..131047 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HVZ07_RS22750 () | 131048..131353 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HVZ07_RS22755 () | 131355..131573 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HVZ07_RS22760 () | 132281..133276 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| HVZ07_RS22765 () | 133280..134212 | + | 933 | WP_000991830.1 | hypothetical protein | - |
| HVZ07_RS22770 () | 134510..135598 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| HVZ07_RS22775 () | 135600..136469 | + | 870 | WP_000253407.1 | hypothetical protein | - |
| HVZ07_RS22780 () | 136526..138091 | - | 1566 | WP_000741348.1 | ATP-binding protein | - |
| HVZ07_RS22785 () | 138378..138890 | + | 513 | WP_001403962.1 | hypothetical protein | - |
| HVZ07_RS22790 () | 138924..140057 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| HVZ07_RS22795 () | 140224..140996 | - | 773 | Protein_147 | hypothetical protein | - |
| HVZ07_RS22800 () | 141025..141510 | - | 486 | WP_001403958.1 | hypothetical protein | - |
| HVZ07_RS22805 () | 141901..144522 | + | 2622 | WP_000283688.1 | histidinol-phosphatase | - |
| HVZ07_RS22810 () | 144721..144951 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HVZ07_RS22815 () | 145040..145315 | + | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HVZ07_RS22820 () | 145320..145537 | - | 218 | Protein_152 | transposase | - |
| HVZ07_RS22825 () | 145538..146068 | - | 531 | WP_053285705.1 | GNAT family N-acetyltransferase | - |
| HVZ07_RS22830 () | 146072..146341 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|