NZ_CP0566981..127911

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 127911 bp
Accession: NZ_CP056698        Location: 1..127911         Organism: Escherichia marmotae strain RHBSTW-00605       Replicon: plasmid pRHBSTW-00605_2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HV246_RS23320 () 1..978 + 978 WP_001559854.1 RepB family plasmid replication initiator protein -
HV246_RS23325 () 1263..1988 - 726 WP_001066962.1 site-specific integrase -
HV246_RS23330 () 2409..3767 - 1359 WP_000826706.1 heavy metal sensor histidine kinase -
HV246_RS23335 () 3767..4438 - 672 WP_024188661.1 response regulator transcription factor HprR -
HV246_RS23340 () 4570..4983 + 414 WP_000920117.1 hydroxyisourate hydrolase -
HV246_RS23345 () 5082..6074 + 993 WP_181479326.1 protein-methionine-sulfoxide reductase catalytic subunit MsrP -
HV246_RS23350 () 6075..6710 + 636 WP_001559859.1 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ -
HV246_RS23355 () 7070..7876 - 807 WP_000016962.1 site-specific integrase -
HV246_RS23360 () 7877..8182 - 306 WP_001159866.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
HV246_RS23365 () 8184..8402 - 219 WP_000813629.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
HV246_RS23370 () 8957..12763 - 3807 WP_001559860.1 hypothetical protein -
HV246_RS23375 () 12945..13439 - 495 WP_024195926.1 type II toxin-antitoxin system YhaV family toxin Toxin Detail
HV246_RS23380 () 13462..13806 - 345 WP_001559862.1 type II toxin-antitoxin system PrlF family antitoxin Antitoxin Detail
HV246_RS23385 () 14050..14127 - 78 Protein_13 helix-turn-helix domain-containing protein -
HV246_RS23390 () 14498..15535 + 1038 WP_181479327.1 nucleotidyltransferase -
HV246_RS23395 () 16232..16654 + 423 WP_181479328.1 universal stress protein -
HV246_RS23400 () 16851..17360 - 510 WP_077768941.1 uracil-DNA glycosylase -
HV246_RS23405 () 17917..18960 + 1044 WP_181479329.1 anaerobic sulfite reductase subunit AsrA -
HV246_RS23410 () 18964..19782 + 819 WP_181479330.1 anaerobic sulfite reductase subunit AsrB -
HV246_RS23415 () 19793..20806 + 1014 WP_024194532.1 sulfite reductase subunit C -
HV246_RS23420 () 20952..21254 - 303 WP_000263658.1 hypothetical protein -
HV246_RS23425 () 22341..24398 + 2058 WP_181479331.1 prolyl oligopeptidase family serine peptidase -
HV246_RS23430 () 24589..25278 - 690 WP_181479332.1 hypothetical protein -
HV246_RS23435 () 25608..28259 - 2652 WP_181479345.1 autotransporter outer membrane beta-barrel domain-containing protein -
HV246_RS23440 () 28708..29049 + 342 WP_064717828.1 PerC family transcriptional regulator -
HV246_RS23445 () 29095..29277 - 183 WP_181479317.1 dolichol monophosphate mannose synthase -
HV246_RS23450 () 29765..30088 + 324 WP_135403504.1 transcriptional regulator -
HV246_RS23455 () 30468..30995 + 528 WP_181479318.1 hypothetical protein -
HV246_RS23460 () 31092..33506 + 2415 WP_181479319.1 PefC/AfrB family outer membrane usher protein -
HV246_RS23465 () 33499..34191 + 693 WP_001558361.1 fimbrial chaperone -
HV246_RS23470 () 34154..34696 + 543 WP_181479320.1 F18 fimbrial protein FedE -
HV246_RS23475 () 34904..35551 + 648 WP_181479321.1 DsbA family protein -
HV246_RS23480 () 35583..35882 + 300 WP_105455879.1 response regulator transcription factor -
HV246_RS23485 () 35973..36899 + 927 WP_181479333.1 hypothetical protein -
HV246_RS23490 () 36912..37121 + 210 WP_181479334.1 hypothetical protein -
HV246_RS23495 () 37302..38276 + 975 WP_181479335.1 transposase -
HV246_RS23500 () 38296..39207 + 912 WP_181479336.1 hypothetical protein -
HV246_RS23505 () 39419..39514 + 96 Protein_37 hypothetical protein -
HV246_RS23510 () 39600..40025 + 426 WP_181479337.1 transposase -
HV246_RS23515 () 40022..40162 + 141 WP_181479350.1 IS66 family insertion sequence element accessory protein TnpB -
HV246_RS23520 () 40155..40649 + 495 Protein_40 IS66 family transposase -
HV246_RS23525 () 40862..41149 - 288 WP_024195838.1 helix-turn-helix transcriptional regulator -
HV246_RS23530 () 41149..41460 - 312 WP_000483534.1 type II toxin-antitoxin system RelE/ParE family toxin -
HV246_RS23535 () 42434..43291 - 858 WP_021555340.1 incFII family plasmid replication initiator RepA -
HV246_RS23540 () 43284..43358 - 75 WP_011387702.1 RepA leader peptide Tap -
HV246_RS23545 () 43593..43853 - 261 WP_000078108.1 replication regulatory protein RepA -
HV246_RS23550 () 44138..44620 - 483 WP_001558270.1 GNAT family N-acetyltransferase Toxin Detail
HV246_RS23555 () 44611..44901 - 291 WP_001558271.1 DUF1778 domain-containing protein Antitoxin Detail
HV246_RS23560 () 45232..45381 - 150 WP_001312851.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 45428..45486 + 59 NuclAT_1 - Antitoxin Detail
- () 45428..45486 + 59 NuclAT_1 - Antitoxin Detail
- () 45428..45486 + 59 NuclAT_1 - Antitoxin Detail
- () 45428..45486 + 59 NuclAT_1 - Antitoxin Detail
HV246_RS23565 () 46429..47028 - 600 Protein_49 hypothetical protein -
HV246_RS23570 () 47411..47611 - 201 WP_001558275.1 hypothetical protein -
HV246_RS23575 () 47744..48304 - 561 WP_001558276.1 fertility inhibition protein FinO -
HV246_RS23580 () 48378..49136 - 759 WP_021555343.1 type-F conjugative transfer system pilin acetylase TraX -
HV246_RS23585 () 49136..54352 - 5217 WP_181479338.1 conjugative transfer relaxase/helicase TraI -
HV246_RS23590 () 54359..56545 - 2187 WP_181479339.1 type IV conjugative transfer system coupling protein TraD -
HV246_RS23595 () 56678..56905 + 228 WP_000450523.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
HV246_RS23600 () 56905..57303 + 399 WP_000911307.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
HV246_RS23605 () 57565..58302 - 738 WP_000927748.1 complement resistance protein TraT -
HV246_RS23610 () 58374..59024 - 651 WP_181479340.1 hypothetical protein -
HV246_RS23615 () 59038..61890 - 2853 WP_181479341.1 conjugal transfer mating pair stabilization protein TraG -
HV246_RS23620 () 61890..63296 - 1407 WP_181479342.1 conjugal transfer protein TraH -
HV246_RS23625 () 63349..63936 - 588 WP_181479343.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
HV246_RS23630 () 63938..64210 - 273 WP_181479344.1 hypothetical protein -
HV246_RS23635 () 64228..65013 - 786 WP_000833559.1 type-F conjugative transfer system pilin assembly protein TraF -
HV246_RS23640 () 65015..66949 - 1935 WP_181479300.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HV246_RS23645 () 66946..67518 - 573 WP_032140653.1 type-F conjugative transfer system pilin assembly protein TrbC -
HV246_RS23650 () 67921..68400 - 480 WP_106426290.1 protein TraP -
HV246_RS23655 () 68433..68816 - 384 WP_038808898.1 hypothetical protein -
HV246_RS23660 () 68872..69870 - 999 WP_001558295.1 conjugal transfer pilus assembly protein TraU -
HV246_RS23665 () 69867..70262 - 396 WP_001078242.1 hypothetical protein -
HV246_RS23670 () 70259..70876 - 618 WP_181479301.1 type-F conjugative transfer system protein TraW -
HV246_RS23675 () 70873..71097 - 225 WP_000752802.1 TraR/DksA C4-type zinc finger protein -
HV246_RS23680 () 71100..71516 - 417 WP_001558298.1 type-F conjugative transfer system protein TrbI -
HV246_RS23685 () 71495..74134 - 2640 WP_089581126.1 type IV secretion system protein TraC -
HV246_RS23690 () 74131..74643 - 513 WP_181479302.1 type IV conjugative transfer system lipoprotein TraV -
HV246_RS23695 () 74655..75989 - 1335 WP_001558301.1 F-type conjugal transfer pilus assembly protein TraB -
HV246_RS23700 () 75982..76761 - 780 WP_021555358.1 type-F conjugative transfer system secretin TraK -
HV246_RS23705 () 76736..77314 - 579 WP_033549278.1 type IV conjugative transfer system protein TraE -
HV246_RS23710 () 77325..77624 - 300 WP_115443067.1 type IV conjugative transfer system protein TraL -
HV246_RS23715 () 77654..78025 - 372 WP_000829553.1 hypothetical protein -
HV246_RS23720 () 78327..78536 - 210 WP_001114348.1 TraY domain-containing protein -
HV246_RS23725 () 78625..79362 - 738 WP_127766633.1 hypothetical protein -
HV246_RS23730 () 79544..79927 - 384 WP_001137956.1 hypothetical protein -
HV246_RS23735 () 80406..80726 + 321 WP_181479303.1 transglycosylase SLT domain-containing protein -
HV246_RS23740 () 80800..81972 + 1173 WP_181479304.1 IS21 family transposase -
HV246_RS23745 () 81972..82769 + 798 WP_000544830.1 IS21-like element IS21 family helper ATPase IstB -
HV246_RS23750 () 82831..82992 + 162 Protein_86 transglycosylase SLT domain-containing protein -
HV246_RS23755 () 83271..84092 - 822 WP_063097562.1 DUF945 domain-containing protein -
HV246_RS23760 () 84199..84495 - 297 WP_001470485.1 hypothetical protein -
HV246_RS23765 () 84519..84725 - 207 WP_069894508.1 single-stranded DNA-binding protein -
HV246_RS23770 () 84795..85091 + 297 Protein_90 hypothetical protein -
HV246_RS23775 () 85392..85553 - 162 WP_000775238.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 85599..85815 - 217 NuclAT_0 - Antitoxin Detail
- () 85599..85815 - 217 NuclAT_0 - Antitoxin Detail
- () 85599..85815 - 217 NuclAT_0 - Antitoxin Detail
- () 85599..85815 - 217 NuclAT_0 - Antitoxin Detail
HV246_RS23780 () 85827..86546 - 720 WP_176261377.1 plasmid SOS inhibition protein A -
HV246_RS23785 () 86543..86977 - 435 WP_001558309.1 conjugation system SOS inhibitor PsiB -
HV246_RS23790 () 87046..89004 - 1959 WP_181479305.1 ParB/RepB/Spo0J family partition protein -
HV246_RS23795 () 89068..89301 - 234 WP_000006026.1 DUF905 domain-containing protein -
HV246_RS23800 () 89358..89813 - 456 WP_181479306.1 single-stranded DNA-binding protein -
HV246_RS23805 () 90608..91171 - 564 WP_097424105.1 class I SAM-dependent methyltransferase -
HV246_RS23810 () 91218..92579 - 1362 WP_181479307.1 DUF3560 domain-containing protein -
HV246_RS23815 () 92631..92861 - 231 WP_181479308.1 hypothetical protein -
HV246_RS23820 () 93541..93849 + 309 WP_181479346.1 pilus assembly protein -
HV246_RS23825 () 93828..94019 - 192 WP_097742211.1 hypothetical protein -
HV246_RS23830 () 94068..94370 - 303 WP_077695322.1 antirestriction protein -
HV246_RS23835 () 94911..95681 - 771 WP_181479309.1 hypothetical protein -
HV246_RS23840 () 95726..96160 - 435 WP_181479310.1 DUF1380 family protein -
HV246_RS23845 () 96172..96393 - 222 WP_112912681.1 hypothetical protein -
HV246_RS23850 () 96394..97032 - 639 WP_181479347.1 DNA methylase -
HV246_RS23855 () 97153..97464 - 312 WP_181479311.1 hypothetical protein -
HV246_RS23860 () 97461..98363 - 903 WP_181479348.1 DUF1281 domain-containing protein -
HV246_RS23865 () 98803..99762 + 960 WP_000921959.1 plasmid segregation protein ParM -
HV246_RS23870 () 99762..100157 + 396 WP_085456851.1 plasmid partitioning/stability family protein -
HV246_RS23875 () 100368..100640 - 273 WP_181479312.1 hypothetical protein -
HV246_RS23880 () 101075..102184 + 1110 WP_181479313.1 hypothetical protein -
HV246_RS23885 () 102339..102740 - 402 WP_168445466.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
HV246_RS23890 () 102673..102930 - 258 WP_181479314.1 type II toxin-antitoxin system antitoxin PemI -
HV246_RS23895 () 103250..103648 + 399 Protein_115 transposase -
HV246_RS23900 () 103945..104976 - 1032 WP_181479315.1 hypothetical protein -
HV246_RS23905 () 105283..105486 - 204 Protein_117 type II toxin-antitoxin system RelE/ParE family toxin -
HV246_RS23910 () 105483..105752 - 270 WP_000079931.1 hypothetical protein -
HV246_RS23915 () 105812..105925 + 114 Protein_119 transposase domain-containing protein -
HV246_RS23920 () 106121..107308 + 1188 WP_181479316.1 IS91 family transposase -
HV246_RS23925 () 107493..108270 - 778 Protein_121 IS3 family transposase -
HV246_RS23930 () 108376..108558 - 183 WP_181479317.1 dolichol monophosphate mannose synthase -
HV246_RS23935 () 109046..109369 + 324 WP_135403504.1 transcriptional regulator -
HV246_RS23940 () 109749..110276 + 528 WP_181479318.1 hypothetical protein -
HV246_RS23945 () 110373..112787 + 2415 WP_181479319.1 PefC/AfrB family outer membrane usher protein -
HV246_RS23950 () 112780..113472 + 693 WP_001558361.1 fimbrial chaperone -
HV246_RS23955 () 113435..113977 + 543 WP_181479320.1 F18 fimbrial protein FedE -
HV246_RS23960 () 114185..114832 + 648 WP_181479321.1 DsbA family protein -
HV246_RS23965 () 114864..115163 + 300 WP_181479322.1 response regulator transcription factor -
HV246_RS23970 () 115223..116125 + 903 WP_135403496.1 hypothetical protein -
HV246_RS23975 () 116258..116629 + 372 WP_181479323.1 hypothetical protein -
HV246_RS23980 () 116722..117144 + 423 WP_181479324.1 hypothetical protein -
HV246_RS23985 () 117312..118132 + 821 Protein_133 DDE-type integrase/transposase/recombinase -
HV246_RS23990 () 118147..119049 + 903 WP_135403498.1 hypothetical protein -
HV246_RS23995 () 119117..119461 + 345 WP_135403499.1 hypothetical protein -
HV246_RS24000 () 119570..119929 + 360 Protein_136 transposase -
HV246_RS24005 () 119985..120509 + 525 Protein_137 transposase -
HV246_RS24010 () 120498..120695 + 198 Protein_138 recombinase family protein -
HV246_RS24015 () 120761..121540 - 780 WP_001297096.1 IS21-like element IS100kyp family helper ATPase IstB -
HV246_RS24020 () 121540..122562 - 1023 WP_000255946.1 IS21-like element IS100 family transposase -
HV246_RS24025 () 122649..122858 + 210 Protein_141 Hin recombinase -
HV246_RS24030 () 124195..125205 - 1011 WP_181479325.1 transposase -
HV246_RS24035 () 125268..125516 + 249 WP_181479349.1 hypothetical protein -
HV246_RS24040 () 125859..126155 + 297 WP_001558263.1 hypothetical protein -
HV246_RS24045 () 126267..126554 - 288 WP_024195838.1 helix-turn-helix transcriptional regulator -
HV246_RS24050 () 126554..126865 - 312 WP_000483534.1 type II toxin-antitoxin system RelE/ParE family toxin -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance