MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 127911 bp
Accession: NZ_CP056698 Location: 1..127911 Organism: Escherichia marmotae strain RHBSTW-00605 Replicon: plasmid pRHBSTW-00605_2
Accession: NZ_CP056698 Location: 1..127911 Organism: Escherichia marmotae strain RHBSTW-00605 Replicon: plasmid pRHBSTW-00605_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HV246_RS23320 () | 1..978 | + | 978 | WP_001559854.1 | RepB family plasmid replication initiator protein | - |
HV246_RS23325 () | 1263..1988 | - | 726 | WP_001066962.1 | site-specific integrase | - |
HV246_RS23330 () | 2409..3767 | - | 1359 | WP_000826706.1 | heavy metal sensor histidine kinase | - |
HV246_RS23335 () | 3767..4438 | - | 672 | WP_024188661.1 | response regulator transcription factor HprR | - |
HV246_RS23340 () | 4570..4983 | + | 414 | WP_000920117.1 | hydroxyisourate hydrolase | - |
HV246_RS23345 () | 5082..6074 | + | 993 | WP_181479326.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
HV246_RS23350 () | 6075..6710 | + | 636 | WP_001559859.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
HV246_RS23355 () | 7070..7876 | - | 807 | WP_000016962.1 | site-specific integrase | - |
HV246_RS23360 () | 7877..8182 | - | 306 | WP_001159866.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
HV246_RS23365 () | 8184..8402 | - | 219 | WP_000813629.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
HV246_RS23370 () | 8957..12763 | - | 3807 | WP_001559860.1 | hypothetical protein | - |
HV246_RS23375 () | 12945..13439 | - | 495 | WP_024195926.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
HV246_RS23380 () | 13462..13806 | - | 345 | WP_001559862.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
HV246_RS23385 () | 14050..14127 | - | 78 | Protein_13 | helix-turn-helix domain-containing protein | - |
HV246_RS23390 () | 14498..15535 | + | 1038 | WP_181479327.1 | nucleotidyltransferase | - |
HV246_RS23395 () | 16232..16654 | + | 423 | WP_181479328.1 | universal stress protein | - |
HV246_RS23400 () | 16851..17360 | - | 510 | WP_077768941.1 | uracil-DNA glycosylase | - |
HV246_RS23405 () | 17917..18960 | + | 1044 | WP_181479329.1 | anaerobic sulfite reductase subunit AsrA | - |
HV246_RS23410 () | 18964..19782 | + | 819 | WP_181479330.1 | anaerobic sulfite reductase subunit AsrB | - |
HV246_RS23415 () | 19793..20806 | + | 1014 | WP_024194532.1 | sulfite reductase subunit C | - |
HV246_RS23420 () | 20952..21254 | - | 303 | WP_000263658.1 | hypothetical protein | - |
HV246_RS23425 () | 22341..24398 | + | 2058 | WP_181479331.1 | prolyl oligopeptidase family serine peptidase | - |
HV246_RS23430 () | 24589..25278 | - | 690 | WP_181479332.1 | hypothetical protein | - |
HV246_RS23435 () | 25608..28259 | - | 2652 | WP_181479345.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
HV246_RS23440 () | 28708..29049 | + | 342 | WP_064717828.1 | PerC family transcriptional regulator | - |
HV246_RS23445 () | 29095..29277 | - | 183 | WP_181479317.1 | dolichol monophosphate mannose synthase | - |
HV246_RS23450 () | 29765..30088 | + | 324 | WP_135403504.1 | transcriptional regulator | - |
HV246_RS23455 () | 30468..30995 | + | 528 | WP_181479318.1 | hypothetical protein | - |
HV246_RS23460 () | 31092..33506 | + | 2415 | WP_181479319.1 | PefC/AfrB family outer membrane usher protein | - |
HV246_RS23465 () | 33499..34191 | + | 693 | WP_001558361.1 | fimbrial chaperone | - |
HV246_RS23470 () | 34154..34696 | + | 543 | WP_181479320.1 | F18 fimbrial protein FedE | - |
HV246_RS23475 () | 34904..35551 | + | 648 | WP_181479321.1 | DsbA family protein | - |
HV246_RS23480 () | 35583..35882 | + | 300 | WP_105455879.1 | response regulator transcription factor | - |
HV246_RS23485 () | 35973..36899 | + | 927 | WP_181479333.1 | hypothetical protein | - |
HV246_RS23490 () | 36912..37121 | + | 210 | WP_181479334.1 | hypothetical protein | - |
HV246_RS23495 () | 37302..38276 | + | 975 | WP_181479335.1 | transposase | - |
HV246_RS23500 () | 38296..39207 | + | 912 | WP_181479336.1 | hypothetical protein | - |
HV246_RS23505 () | 39419..39514 | + | 96 | Protein_37 | hypothetical protein | - |
HV246_RS23510 () | 39600..40025 | + | 426 | WP_181479337.1 | transposase | - |
HV246_RS23515 () | 40022..40162 | + | 141 | WP_181479350.1 | IS66 family insertion sequence element accessory protein TnpB | - |
HV246_RS23520 () | 40155..40649 | + | 495 | Protein_40 | IS66 family transposase | - |
HV246_RS23525 () | 40862..41149 | - | 288 | WP_024195838.1 | helix-turn-helix transcriptional regulator | - |
HV246_RS23530 () | 41149..41460 | - | 312 | WP_000483534.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
HV246_RS23535 () | 42434..43291 | - | 858 | WP_021555340.1 | incFII family plasmid replication initiator RepA | - |
HV246_RS23540 () | 43284..43358 | - | 75 | WP_011387702.1 | RepA leader peptide Tap | - |
HV246_RS23545 () | 43593..43853 | - | 261 | WP_000078108.1 | replication regulatory protein RepA | - |
HV246_RS23550 () | 44138..44620 | - | 483 | WP_001558270.1 | GNAT family N-acetyltransferase | Toxin Detail |
HV246_RS23555 () | 44611..44901 | - | 291 | WP_001558271.1 | DUF1778 domain-containing protein | Antitoxin Detail |
HV246_RS23560 () | 45232..45381 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
- () | 45428..45486 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
- () | 45428..45486 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
- () | 45428..45486 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
- () | 45428..45486 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
HV246_RS23565 () | 46429..47028 | - | 600 | Protein_49 | hypothetical protein | - |
HV246_RS23570 () | 47411..47611 | - | 201 | WP_001558275.1 | hypothetical protein | - |
HV246_RS23575 () | 47744..48304 | - | 561 | WP_001558276.1 | fertility inhibition protein FinO | - |
HV246_RS23580 () | 48378..49136 | - | 759 | WP_021555343.1 | type-F conjugative transfer system pilin acetylase TraX | - |
HV246_RS23585 () | 49136..54352 | - | 5217 | WP_181479338.1 | conjugative transfer relaxase/helicase TraI | - |
HV246_RS23590 () | 54359..56545 | - | 2187 | WP_181479339.1 | type IV conjugative transfer system coupling protein TraD | - |
HV246_RS23595 () | 56678..56905 | + | 228 | WP_000450523.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
HV246_RS23600 () | 56905..57303 | + | 399 | WP_000911307.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
HV246_RS23605 () | 57565..58302 | - | 738 | WP_000927748.1 | complement resistance protein TraT | - |
HV246_RS23610 () | 58374..59024 | - | 651 | WP_181479340.1 | hypothetical protein | - |
HV246_RS23615 () | 59038..61890 | - | 2853 | WP_181479341.1 | conjugal transfer mating pair stabilization protein TraG | - |
HV246_RS23620 () | 61890..63296 | - | 1407 | WP_181479342.1 | conjugal transfer protein TraH | - |
HV246_RS23625 () | 63349..63936 | - | 588 | WP_181479343.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
HV246_RS23630 () | 63938..64210 | - | 273 | WP_181479344.1 | hypothetical protein | - |
HV246_RS23635 () | 64228..65013 | - | 786 | WP_000833559.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
HV246_RS23640 () | 65015..66949 | - | 1935 | WP_181479300.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
HV246_RS23645 () | 66946..67518 | - | 573 | WP_032140653.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
HV246_RS23650 () | 67921..68400 | - | 480 | WP_106426290.1 | protein TraP | - |
HV246_RS23655 () | 68433..68816 | - | 384 | WP_038808898.1 | hypothetical protein | - |
HV246_RS23660 () | 68872..69870 | - | 999 | WP_001558295.1 | conjugal transfer pilus assembly protein TraU | - |
HV246_RS23665 () | 69867..70262 | - | 396 | WP_001078242.1 | hypothetical protein | - |
HV246_RS23670 () | 70259..70876 | - | 618 | WP_181479301.1 | type-F conjugative transfer system protein TraW | - |
HV246_RS23675 () | 70873..71097 | - | 225 | WP_000752802.1 | TraR/DksA C4-type zinc finger protein | - |
HV246_RS23680 () | 71100..71516 | - | 417 | WP_001558298.1 | type-F conjugative transfer system protein TrbI | - |
HV246_RS23685 () | 71495..74134 | - | 2640 | WP_089581126.1 | type IV secretion system protein TraC | - |
HV246_RS23690 () | 74131..74643 | - | 513 | WP_181479302.1 | type IV conjugative transfer system lipoprotein TraV | - |
HV246_RS23695 () | 74655..75989 | - | 1335 | WP_001558301.1 | F-type conjugal transfer pilus assembly protein TraB | - |
HV246_RS23700 () | 75982..76761 | - | 780 | WP_021555358.1 | type-F conjugative transfer system secretin TraK | - |
HV246_RS23705 () | 76736..77314 | - | 579 | WP_033549278.1 | type IV conjugative transfer system protein TraE | - |
HV246_RS23710 () | 77325..77624 | - | 300 | WP_115443067.1 | type IV conjugative transfer system protein TraL | - |
HV246_RS23715 () | 77654..78025 | - | 372 | WP_000829553.1 | hypothetical protein | - |
HV246_RS23720 () | 78327..78536 | - | 210 | WP_001114348.1 | TraY domain-containing protein | - |
HV246_RS23725 () | 78625..79362 | - | 738 | WP_127766633.1 | hypothetical protein | - |
HV246_RS23730 () | 79544..79927 | - | 384 | WP_001137956.1 | hypothetical protein | - |
HV246_RS23735 () | 80406..80726 | + | 321 | WP_181479303.1 | transglycosylase SLT domain-containing protein | - |
HV246_RS23740 () | 80800..81972 | + | 1173 | WP_181479304.1 | IS21 family transposase | - |
HV246_RS23745 () | 81972..82769 | + | 798 | WP_000544830.1 | IS21-like element IS21 family helper ATPase IstB | - |
HV246_RS23750 () | 82831..82992 | + | 162 | Protein_86 | transglycosylase SLT domain-containing protein | - |
HV246_RS23755 () | 83271..84092 | - | 822 | WP_063097562.1 | DUF945 domain-containing protein | - |
HV246_RS23760 () | 84199..84495 | - | 297 | WP_001470485.1 | hypothetical protein | - |
HV246_RS23765 () | 84519..84725 | - | 207 | WP_069894508.1 | single-stranded DNA-binding protein | - |
HV246_RS23770 () | 84795..85091 | + | 297 | Protein_90 | hypothetical protein | - |
HV246_RS23775 () | 85392..85553 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
- () | 85599..85815 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
- () | 85599..85815 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
- () | 85599..85815 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
- () | 85599..85815 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
HV246_RS23780 () | 85827..86546 | - | 720 | WP_176261377.1 | plasmid SOS inhibition protein A | - |
HV246_RS23785 () | 86543..86977 | - | 435 | WP_001558309.1 | conjugation system SOS inhibitor PsiB | - |
HV246_RS23790 () | 87046..89004 | - | 1959 | WP_181479305.1 | ParB/RepB/Spo0J family partition protein | - |
HV246_RS23795 () | 89068..89301 | - | 234 | WP_000006026.1 | DUF905 domain-containing protein | - |
HV246_RS23800 () | 89358..89813 | - | 456 | WP_181479306.1 | single-stranded DNA-binding protein | - |
HV246_RS23805 () | 90608..91171 | - | 564 | WP_097424105.1 | class I SAM-dependent methyltransferase | - |
HV246_RS23810 () | 91218..92579 | - | 1362 | WP_181479307.1 | DUF3560 domain-containing protein | - |
HV246_RS23815 () | 92631..92861 | - | 231 | WP_181479308.1 | hypothetical protein | - |
HV246_RS23820 () | 93541..93849 | + | 309 | WP_181479346.1 | pilus assembly protein | - |
HV246_RS23825 () | 93828..94019 | - | 192 | WP_097742211.1 | hypothetical protein | - |
HV246_RS23830 () | 94068..94370 | - | 303 | WP_077695322.1 | antirestriction protein | - |
HV246_RS23835 () | 94911..95681 | - | 771 | WP_181479309.1 | hypothetical protein | - |
HV246_RS23840 () | 95726..96160 | - | 435 | WP_181479310.1 | DUF1380 family protein | - |
HV246_RS23845 () | 96172..96393 | - | 222 | WP_112912681.1 | hypothetical protein | - |
HV246_RS23850 () | 96394..97032 | - | 639 | WP_181479347.1 | DNA methylase | - |
HV246_RS23855 () | 97153..97464 | - | 312 | WP_181479311.1 | hypothetical protein | - |
HV246_RS23860 () | 97461..98363 | - | 903 | WP_181479348.1 | DUF1281 domain-containing protein | - |
HV246_RS23865 () | 98803..99762 | + | 960 | WP_000921959.1 | plasmid segregation protein ParM | - |
HV246_RS23870 () | 99762..100157 | + | 396 | WP_085456851.1 | plasmid partitioning/stability family protein | - |
HV246_RS23875 () | 100368..100640 | - | 273 | WP_181479312.1 | hypothetical protein | - |
HV246_RS23880 () | 101075..102184 | + | 1110 | WP_181479313.1 | hypothetical protein | - |
HV246_RS23885 () | 102339..102740 | - | 402 | WP_168445466.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
HV246_RS23890 () | 102673..102930 | - | 258 | WP_181479314.1 | type II toxin-antitoxin system antitoxin PemI | - |
HV246_RS23895 () | 103250..103648 | + | 399 | Protein_115 | transposase | - |
HV246_RS23900 () | 103945..104976 | - | 1032 | WP_181479315.1 | hypothetical protein | - |
HV246_RS23905 () | 105283..105486 | - | 204 | Protein_117 | type II toxin-antitoxin system RelE/ParE family toxin | - |
HV246_RS23910 () | 105483..105752 | - | 270 | WP_000079931.1 | hypothetical protein | - |
HV246_RS23915 () | 105812..105925 | + | 114 | Protein_119 | transposase domain-containing protein | - |
HV246_RS23920 () | 106121..107308 | + | 1188 | WP_181479316.1 | IS91 family transposase | - |
HV246_RS23925 () | 107493..108270 | - | 778 | Protein_121 | IS3 family transposase | - |
HV246_RS23930 () | 108376..108558 | - | 183 | WP_181479317.1 | dolichol monophosphate mannose synthase | - |
HV246_RS23935 () | 109046..109369 | + | 324 | WP_135403504.1 | transcriptional regulator | - |
HV246_RS23940 () | 109749..110276 | + | 528 | WP_181479318.1 | hypothetical protein | - |
HV246_RS23945 () | 110373..112787 | + | 2415 | WP_181479319.1 | PefC/AfrB family outer membrane usher protein | - |
HV246_RS23950 () | 112780..113472 | + | 693 | WP_001558361.1 | fimbrial chaperone | - |
HV246_RS23955 () | 113435..113977 | + | 543 | WP_181479320.1 | F18 fimbrial protein FedE | - |
HV246_RS23960 () | 114185..114832 | + | 648 | WP_181479321.1 | DsbA family protein | - |
HV246_RS23965 () | 114864..115163 | + | 300 | WP_181479322.1 | response regulator transcription factor | - |
HV246_RS23970 () | 115223..116125 | + | 903 | WP_135403496.1 | hypothetical protein | - |
HV246_RS23975 () | 116258..116629 | + | 372 | WP_181479323.1 | hypothetical protein | - |
HV246_RS23980 () | 116722..117144 | + | 423 | WP_181479324.1 | hypothetical protein | - |
HV246_RS23985 () | 117312..118132 | + | 821 | Protein_133 | DDE-type integrase/transposase/recombinase | - |
HV246_RS23990 () | 118147..119049 | + | 903 | WP_135403498.1 | hypothetical protein | - |
HV246_RS23995 () | 119117..119461 | + | 345 | WP_135403499.1 | hypothetical protein | - |
HV246_RS24000 () | 119570..119929 | + | 360 | Protein_136 | transposase | - |
HV246_RS24005 () | 119985..120509 | + | 525 | Protein_137 | transposase | - |
HV246_RS24010 () | 120498..120695 | + | 198 | Protein_138 | recombinase family protein | - |
HV246_RS24015 () | 120761..121540 | - | 780 | WP_001297096.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
HV246_RS24020 () | 121540..122562 | - | 1023 | WP_000255946.1 | IS21-like element IS100 family transposase | - |
HV246_RS24025 () | 122649..122858 | + | 210 | Protein_141 | Hin recombinase | - |
HV246_RS24030 () | 124195..125205 | - | 1011 | WP_181479325.1 | transposase | - |
HV246_RS24035 () | 125268..125516 | + | 249 | WP_181479349.1 | hypothetical protein | - |
HV246_RS24040 () | 125859..126155 | + | 297 | WP_001558263.1 | hypothetical protein | - |
HV246_RS24045 () | 126267..126554 | - | 288 | WP_024195838.1 | helix-turn-helix transcriptional regulator | - |
HV246_RS24050 () | 126554..126865 | - | 312 | WP_000483534.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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