MGE detailed information
MGE type: Prophage MGE length: 25743 bp
Accession: NZ_CP054665 Location: 1635819..1661561 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Accession: NZ_CP054665 Location: 1635819..1661561 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUR94_RS08065 (1632334) | 1632334..1633080 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| HUR94_RS08070 (1633169) | 1633169..1633855 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| HUR94_RS08075 (1634032) | 1634032..1634235 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HUR94_RS08080 (1634270) | 1634270..1635730 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| HUR94_RS08085 (1635819) | 1635819..1637186 | - | 1368 | Protein_1573 | MHS family MFS transporter | - |
| HUR94_RS08090 (1637707) | 1637707..1637820 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HUR94_RS08095 (1637889) | 1637889..1638122 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HUR94_RS08100 (1638439) | 1638439..1639029 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HUR94_RS08105 (1639127) | 1639127..1639702 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| HUR94_RS08110 (1639702) | 1639702..1640664 | - | 963 | WP_001027733.1 | phage tail protein | - |
| HUR94_RS08115 (1640615) | 1640615..1641184 | - | 570 | WP_064673984.1 | DNA-packaging protein | - |
| HUR94_RS08120 (1641573) | 1641573..1641806 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HUR94_RS08125 (1641864) | 1641864..1642274 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HUR94_RS08130 (1642426) | 1642426..1642599 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HUR94_RS08135 (1642771) | 1642771..1642926 | - | 156 | WP_001309517.1 | protein YnfN | - |
| HUR94_RS08140 (1643005) | 1643005..1643070 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| HUR94_RS08145 (1643073) | 1643073..1643261 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| HUR94_RS08150 (1643272) | 1643272..1643484 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HUR94_RS08155 (1643847) | 1643847..1644344 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HUR94_RS08160 (1644341) | 1644341..1644874 | - | 534 | WP_001092971.1 | lysozyme | - |
| HUR94_RS08165 (1644871) | 1644871..1645182 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| HUR94_RS08170 (1645187) | 1645187..1645402 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HUR94_RS08175 (1645622) | 1645622..1645792 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| HUR94_RS08180 (1646156) | 1646156..1646371 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HUR94_RS08185 (1646672) | 1646672..1646884 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HUR94_RS08190 (1646939) | 1646939..1647028 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| HUR94_RS08195 (1647306) | 1647306..1648058 | - | 753 | WP_001047135.1 | antitermination protein | - |
| HUR94_RS08200 (1648072) | 1648072..1649121 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| HUR94_RS08205 (1649123) | 1649123..1649401 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| HUR94_RS08210 (1649468) | 1649468..1649719 | - | 252 | WP_000980994.1 | protein Rem | - |
| HUR94_RS08215 (1649936) | 1649936..1650091 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HUR94_RS08220 (1650163) | 1650163..1650450 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HUR94_RS08225 (1650450) | 1650450..1650689 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HUR94_RS08230 (1650714) | 1650714..1651019 | + | 306 | WP_001326990.1 | protein YdfV | - |
| HUR94_RS08235 (1651222) | 1651222..1651554 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| HUR94_RS08240 (1651991) | 1651991..1652140 | - | 150 | WP_011443592.1 | protein YdfW | - |
| HUR94_RS08245 (1652175) | 1652175..1652453 | - | 279 | Protein_1605 | hypothetical protein | - |
| HUR94_RS08250 (1652437) | 1652437..1652667 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| HUR94_RS08255 (1652751) | 1652751..1653158 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| HUR94_RS08260 (1653325) | 1653325..1653480 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| HUR94_RS22945 (1653482) | 1653482..1653610 | + | 129 | WP_000344964.1 | protein YdfB | - |
| HUR94_RS08265 (1653640) | 1653640..1653858 | + | 219 | WP_001171942.1 | protein YdfC | - |
| HUR94_RS08270 (1654426) | 1654426..1654614 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HUR94_RS08275 (1654611) | 1654611..1654802 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| HUR94_RS08280 (1654895) | 1654895..1655662 | + | 768 | Protein_1613 | exonuclease | - |
| HUR94_RS08285 (1655659) | 1655659..1656354 | + | 696 | Protein_1614 | IS3 family transposase IS2 | Transposase |
| HUR94_RS08290 (1656368) | 1656368..1657525 | + | 1158 | Protein_1615 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HUR94_RS08295 (1657713) | 1657713..1658732 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| HUR94_RS08300 (1658744) | 1658744..1659958 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HUR94_RS08305 (1660164) | 1660164..1660490 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| HUR94_RS08310 (1660625) | 1660625..1660966 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HUR94_RS08315 (1661001) | 1661001..1661561 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HUR94_RS08320 (1661564) | 1661564..1662274 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HUR94_RS08325 (1662382) | 1662382..1662687 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| HUR94_RS08330 (1662886) | 1662886..1665312 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.008 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.008 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.003 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.008 |