NZ_CP0517391..172627

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 172627 bp
Accession: NZ_CP051739        Location: 1..172627         Organism: Escherichia coli strain SCU-105       Replicon: plasmid pSCU-105-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HHJ23_RS24650 () 1..340 + 340 WP_169063269.1 DUF4113 domain-containing protein -
HHJ23_RS24655 () 345..737 - 393 WP_000340833.1 plasmid partitioning/stability family protein -
HHJ23_RS24660 () 742..1713 - 972 WP_049036915.1 plasmid segregation protein parM -
HHJ23_RS24665 () 1942..2586 + 645 WP_000633911.1 AAA family ATPase -
HHJ23_RS24670 () 2580..2855 + 276 WP_000239529.1 hypothetical protein -
HHJ23_RS24675 () 2993..3802 - 810 WP_000016979.1 site-specific integrase -
HHJ23_RS24680 () 3803..4108 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
HHJ23_RS24685 () 4110..4328 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
HHJ23_RS24690 () 4902..5990 + 1089 WP_049036913.1 transcriptional repressor PifC -
HHJ23_RS24695 () 5992..8217 + 2226 WP_049036910.1 exclusion suppressor FxsA -
HHJ23_RS24700 () 8267..9166 - 900 WP_000963206.1 nucleotide-binding protein -
HHJ23_RS24705 () 9156..9446 - 291 WP_000111771.1 hypothetical protein -
HHJ23_RS24710 () 9741..9971 + 231 WP_001261287.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
HHJ23_RS24715 () 9968..10384 + 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
HHJ23_RS24720 () 10546..12684 - 2139 WP_000350635.1 AAA family ATPase -
HHJ23_RS24725 () 13002..13253 + 252 WP_049036907.1 hypothetical protein -
HHJ23_RS24730 () 13253..13843 + 591 WP_024234847.1 hypothetical protein -
HHJ23_RS24735 () 13861..14208 - 348 WP_024234846.1 hypothetical protein -
HHJ23_RS24740 () 14337..14672 + 336 WP_024234845.1 colicin transporter -
HHJ23_RS24745 () 14690..15001 - 312 WP_169063268.1 hypothetical protein -
HHJ23_RS24750 () 15266..15609 - 344 Protein_20 IS3 family transposase ISEcl1 Transposase
HHJ23_RS24755 () 15722..16783 - 1062 WP_169063270.1 hypothetical protein -
HHJ23_RS24760 () 17967..18944 + 978 WP_000361615.1 RepB family plasmid replication initiator protein -
HHJ23_RS24765 () 19229..19969 - 741 WP_001066942.1 tyrosine-type recombinase/integrase -
HHJ23_RS24770 () 20090..20278 - 189 WP_049035582.1 hypothetical protein -
HHJ23_RS24775 () 20641..21810 + 1170 WP_163425737.1 hypothetical protein -
HHJ23_RS24780 () 21958..22130 - 173 Protein_26 IS3 family transposase -
HHJ23_RS24785 () 22576..22848 - 273 WP_075210309.1 Major pilu subunit operon regulatory protein PapB VF
HHJ23_RS24790 () 23572..24372 - 801 WP_049035578.1 helix-turn-helix transcriptional regulator -
HHJ23_RS24795 () 24603..24758 - 156 Protein_29 IS3 family transposase IS2 Transposase
HHJ23_RS24800 () 25036..25525 - 490 Protein_30 Tn3 family transposase -
HHJ23_RS24805 () 25509..25762 + 254 Protein_31 VapC toxin family PIN domain ribonuclease -
HHJ23_RS24810 () 25915..26124 + 210 Protein_32 transposase -
HHJ23_RS24815 () 26539..26652 + 114 WP_158662379.1 Serine protease sat autotransporter VF
HHJ23_RS24820 () 26649..30356 + 3708 WP_077792286.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
HHJ23_RS25915 () 30658..30831 + 174 Protein_35 recombinase family protein -
HHJ23_RS24825 () 30826..31014 + 189 Protein_36 hypothetical protein -
HHJ23_RS24830 () 31080..32242 + 1163 WP_085949416.1 IS3 family transposase IS3 Transposase
HHJ23_RS24835 () 32270..33082 + 813 Protein_38 IS21 family transposase IS100kyp Transposase
HHJ23_RS24840 () 33079..33444 + 366 Protein_39 IS66 family transposase ISEc8 Transposase
HHJ23_RS24845 () 33441..34424 - 984 Protein_40 IS66 family transposase ISEc8 Transposase
HHJ23_RS24850 () 34474..34821 - 348 WP_000612632.1 IS66 family transposase ISEc8 Transposase
HHJ23_RS24855 () 34818..35207 - 390 WP_174714831.1 IS66 family transposase ISEc8 Transposase
HHJ23_RS24860 () 35552..35974 + 423 Protein_43 IS3 family transposase IS629 Transposase
HHJ23_RS24865 () 36131..36619 - 489 WP_169063271.1 Fimbrial protein VF
HHJ23_RS24870 () 36726..37160 - 435 WP_049036268.1 Protein AfaD VF
HHJ23_RS24875 () 37172..39730 - 2559 WP_049036265.1 F1 capsule-anchoring protein VF
HHJ23_RS24880 () 39768..40568 - 801 WP_169063272.1 Chaperone protein caf1M VF
HHJ23_RS24885 () 40876..41177 - 302 Protein_48 IS1 family transposase -
HHJ23_RS24890 () 41359..41748 - 390 Protein_49 DDE-type integrase/transposase/recombinase -
HHJ23_RS24895 () 41818..42054 - 237 Protein_50 transposase -
HHJ23_RS24900 () 42056..42526 + 471 Protein_51 Tn3 family transposase TnpA_ISSba14 Transposase
HHJ23_RS24905 () 42525..42781 + 257 Protein_52 hypothetical protein -
HHJ23_RS24910 () 42762..43970 + 1209 Protein_53 IS91 family transposase -
HHJ23_RS24915 () 44142..44300 - 159 WP_169063273.1 hypothetical protein -
HHJ23_RS24920 () 45002..45793 - 792 Protein_55 incFII family plasmid replication initiator RepA -
HHJ23_RS24925 () 45987..47528 + 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
HHJ23_RS24930 () 47543..48289 + 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
HHJ23_RS24935 () 48371..48445 - 75 Protein_58 replication protein RepA -
HHJ23_RS24940 () 48438..48512 - 75 WP_001365705.1 RepA leader peptide Tap -
HHJ23_RS24945 () 48750..49004 - 255 WP_000083846.1 replication regulatory protein RepA -
HHJ23_RS24950 () 49308..49790 - 483 WP_000405252.1 GNAT family N-acetyltransferase Toxin Detail
HHJ23_RS24955 () 49781..50083 - 303 WP_001346256.1 DUF1778 domain-containing protein Antitoxin Detail
HHJ23_RS24960 () 50292..50553 - 262 Protein_63 type I toxin-antitoxin system Hok family toxin -
- () 50606..50657 + 52 NuclAT_1 - -
- () 50606..50657 + 52 NuclAT_1 - -
- () 50606..50657 + 52 NuclAT_1 - -
- () 50606..50657 + 52 NuclAT_1 - -
HHJ23_RS24965 () 50756..51003 - 248 Protein_64 DUF2726 domain-containing protein -
HHJ23_RS24970 () 51492..51704 - 213 WP_049035740.1 ANR family transcriptional regulator -
HHJ23_RS24975 () 51835..52395 - 561 WP_169063274.1 fertility inhibition protein FinO -
HHJ23_RS24980 () 52450..53196 - 747 WP_000205718.1 conjugal transfer pilus acetylase TraX -
HHJ23_RS24985 () 53216..58486 - 5271 WP_169063275.1 Multifunctional conjugation protein TraI Relaxase
HHJ23_RS24990 () 58486..60720 - 2235 WP_169063276.1 type IV conjugative transfer system coupling protein TraD -
HHJ23_RS24995 () 61002..61481 - 480 WP_049036036.1 hypothetical protein -
HHJ23_RS25000 () 61685..62416 - 732 WP_049035990.1 complement resistance protein TraT -
HHJ23_RS25005 () 62465..62950 - 486 WP_077513832.1 surface exclusion protein -
HHJ23_RS25010 () 62966..64445 - 1480 Protein_73 conjugal transfer protein TraG -
HHJ23_RS25015 () 64483..65558 + 1076 Protein_74 IS3 family transposase -
HHJ23_RS25020 () 65549..65904 - 356 Protein_75 type-F conjugative transfer system pilin assembly protein TrbC -
HHJ23_RS25025 () 65954..66262 - 309 WP_169063277.1 hypothetical protein -
HHJ23_RS25030 () 66292..67282 - 991 Protein_77 conjugal transfer pilus assembly protein TraU -
HHJ23_RS25035 () 67279..67913 - 635 Protein_78 type-F conjugative transfer system protein TraW -
HHJ23_RS25040 () 67910..68295 - 386 Protein_79 type-F conjugative transfer system protein TrbI -
HHJ23_RS25045 () 68292..70919 - 2628 WP_001505126.1 type IV secretion system protein TraC -
HHJ23_RS25050 () 71079..71300 - 222 WP_001278694.1 conjugal transfer protein TraR -
HHJ23_RS25055 () 71435..71950 - 516 WP_000809891.1 type IV conjugative transfer system lipoprotein TraV -
HHJ23_RS25060 () 71947..72198 - 252 WP_001038341.1 conjugal transfer protein TrbG -
HHJ23_RS25065 () 72191..72544 - 354 WP_071528018.1 conjugal transfer protein TrbD -
HHJ23_RS25070 () 72498..73082 - 585 WP_000002795.1 conjugal transfer protein TraP -
HHJ23_RS25075 () 73072..74499 - 1428 WP_169063278.1 conjugal transfer protein TraB -
HHJ23_RS25080 () 74499..75203 - 705 WP_148952286.1 type-F conjugative transfer system secretin TraK -
HHJ23_RS25085 () 75214..75780 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
HHJ23_RS25090 () 75802..76113 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
HHJ23_RS25095 () 76118..76480 - 363 WP_000338606.1 type IV conjugative transfer system pilin TraA -
HHJ23_RS25100 () 76514..76741 - 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
HHJ23_RS25105 () 77100..77493 - 394 Protein_92 PAS domain-containing protein -
HHJ23_RS25110 () 77685..78066 - 382 Protein_93 relaxosome protein TraM -
HHJ23_RS25115 () 78409..78999 + 591 WP_000252684.1 hypothetical protein VF
HHJ23_RS25120 () 79295..80116 - 822 WP_001234469.1 DUF945 domain-containing protein -
HHJ23_RS25125 () 80235..80522 - 288 WP_001595289.1 hypothetical protein -
HHJ23_RS25920 () 80823..81120 + 298 Protein_97 hypothetical protein -
HHJ23_RS25135 () 81421..81582 - 162 WP_000775237.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 81635..81834 - 200 NuclAT_0 - Antitoxin Detail
- () 81635..81834 - 200 NuclAT_0 - Antitoxin Detail
- () 81635..81834 - 200 NuclAT_0 - Antitoxin Detail
- () 81635..81834 - 200 NuclAT_0 - Antitoxin Detail
HHJ23_RS25140 () 81791..82105 - 315 WP_000870669.1 hypothetical protein -
HHJ23_RS25145 () 82102..82821 - 720 WP_000994097.1 plasmid SOS inhibition protein A -
HHJ23_RS25150 () 82818..83252 - 435 WP_000845950.1 conjugation system SOS inhibitor PsiB -
HHJ23_RS25155 () 83307..85265 - 1959 WP_001145497.1 ParB/RepB/Spo0J family partition protein -
HHJ23_RS25160 () 85324..85557 - 234 WP_000005975.1 DUF905 domain-containing protein -
HHJ23_RS25165 () 85613..86140 - 528 WP_000290816.1 single-stranded DNA-binding protein -
HHJ23_RS25175 () 87025..87588 - 564 WP_001311069.1 class I SAM-dependent methyltransferase -
HHJ23_RS25180 () 87635..88996 - 1362 WP_000170673.1 DUF3560 domain-containing protein -
HHJ23_RS25185 () 89048..89278 - 231 WP_000218642.1 hypothetical protein -
HHJ23_RS25195 () 89773..90352 + 580 Protein_108 hypothetical protein -
HHJ23_RS25200 () 90322..90513 - 192 WP_001027516.1 hypothetical protein -
HHJ23_RS25205 () 90510..90932 - 423 WP_097465182.1 DUF1380 family protein -
HHJ23_RS25210 () 90979..91281 - 303 WP_072126845.1 antirestriction protein -
HHJ23_RS25925 () 91820..92590 - 771 WP_001006247.1 hypothetical protein -
HHJ23_RS25225 () 92635..93069 - 435 WP_000274447.1 DUF1380 family protein -
HHJ23_RS25230 () 93083..93304 - 222 WP_001104865.1 hypothetical protein -
HHJ23_RS25235 () 93305..93988 - 684 WP_000085884.1 DNA methylase -
HHJ23_RS25240 () 94065..94376 - 312 WP_032144809.1 hypothetical protein -
HHJ23_RS25245 () 94373..94813 - 441 Protein_117 DUF1281 domain-containing protein -
HHJ23_RS25250 () 95031..95990 + 960 WP_000921958.1 plasmid segregation protein ParM -
HHJ23_RS25255 () 95990..96385 + 396 WP_000445932.1 plasmid partitioning/stability family protein -
HHJ23_RS25260 () 96500..96901 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
HHJ23_RS25265 () 96834..97091 - 258 WP_001757011.1 type II toxin-antitoxin system antitoxin PemI -
HHJ23_RS25270 () 97184..97837 - 654 WP_001757010.1 CPBP family intramembrane metalloprotease -
HHJ23_RS25280 () 98162..98404 - 243 Protein_123 phosphoglucosamine mutase -
HHJ23_RS25285 () 98491..99306 - 816 WP_001043260.1 Dihydropteroate synthase ARG
HHJ23_RS25300 () 100080..100619 + 540 WP_126755965.1 Tn3 family transposase TnpR_ISMex22 Transposase
HHJ23_RS25305 () 100685..101488 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
HHJ23_RS25310 () 101488..102324 + 837 WP_169063279.1 hypothetical protein ARG
HHJ23_RS25320 () 102489..102704 - 216 Protein_128 replication protein C -
HHJ23_RS25325 () 102769..103473 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HHJ23_RS25330 () 103734..104015 - 282 WP_001757034.1 hypothetical protein -
HHJ23_RS25335 () 104121..104405 - 285 WP_169063307.1 type II toxin-antitoxin system RelE/ParE family toxin -
HHJ23_RS25340 () 104412..107387 - 2976 WP_169063280.1 Tn3 family transposase TnpA_TnAs1 Transposase
HHJ23_RS25345 () 107391..107951 - 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
HHJ23_RS25355 () 108261..109838 + 1578 WP_001323889.1 Aerotaxis receptor VF
HHJ23_RS25360 () 110029..110331 + 303 Protein_135 IS21 family transposase -
HHJ23_RS25365 () 110346..111092 + 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
HHJ23_RS25370 () 111608..112381 - 774 WP_169063281.1 hypothetical protein VF
HHJ23_RS25375 () 112398..113162 - 765 WP_169063282.1 hypothetical protein VF
HHJ23_RS25380 () 113193..113981 - 789 WP_169063283.1 hypothetical protein VF
HHJ23_RS25385 () 114104..114868 - 765 WP_169063284.1 hypothetical protein -
HHJ23_RS25390 () 115107..115598 - 492 WP_169063285.1 hypothetical protein VF
HHJ23_RS25395 () 115686..116408 - 723 WP_169063286.1 Chaperone protein FaeE VF
HHJ23_RS25400 () 116401..118803 - 2403 WP_169063287.1 F1 capsule-anchoring protein VF
HHJ23_RS25405 () 118860..119402 - 543 WP_169063288.1 hypothetical protein VF
HHJ23_RS25410 () 119410..119709 - 300 WP_211196911.1 Major pilu subunit operon regulatory protein PapB VF
HHJ23_RS25415 () 120192..120431 + 240 WP_169063290.1 P fimbrial regulatory protein KS71A VF
HHJ23_RS25420 () 120691..120926 + 236 Protein_147 transposase -
HHJ23_RS25425 () 121705..125121 - 3417 WP_169063291.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
HHJ23_RS25430 () 125179..126392 + 1214 WP_162886171.1 IS3 family transposase IS629 Transposase
HHJ23_RS25435 () 126274..126708 - 435 WP_169063308.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
HHJ23_RS25440 () 126972..127238 - 267 WP_169063309.1 hypothetical protein -
HHJ23_RS25445 () 128116..129453 + 1338 WP_169063292.1 amino acid permease -
HHJ23_RS25450 () 129707..129952 - 246 Protein_153 IS4 family transposase IS4 Transposase
HHJ23_RS25455 () 130305..131136 - 832 Protein_154 3'-5' exonuclease -
HHJ23_RS25460 () 131182..131463 - 282 WP_169063293.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HHJ23_RS25465 () 131460..131729 - 270 WP_169063294.1 hypothetical protein Antitoxin Detail
HHJ23_RS25470 () 131812..132022 + 211 Protein_157 ISKra4 family transposase -
HHJ23_RS25475 () 132389..132625 - 237 WP_169063295.1 hypothetical protein -
HHJ23_RS25480 () 132832..133287 - 456 WP_169063296.1 hypothetical protein -
HHJ23_RS25490 () 134576..135061 - 486 WP_169063297.1 LysR family transcriptional regulator -
HHJ23_RS25495 () 135156..135665 + 510 WP_169063298.1 phenolic acid decarboxylase -
HHJ23_RS25500 () 135678..136724 + 1047 WP_169063299.1 alpha/beta hydrolase -
HHJ23_RS25505 () 136841..137416 - 576 WP_169063300.1 proQ/FINO family protein -
HHJ23_RS25510 () 137859..138146 - 288 WP_169063301.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HHJ23_RS25515 () 138143..138394 - 252 WP_169063302.1 antitoxin Antitoxin Detail
HHJ23_RS25520 () 139351..140208 - 858 WP_169063303.1 incFII family plasmid replication initiator RepA -
HHJ23_RS25525 () 140201..140275 - 75 WP_001375168.1 RepA leader peptide Tap -
HHJ23_RS25530 () 140521..140769 - 249 WP_000083839.1 replication regulatory protein RepA -
HHJ23_RS25535 () 141009..141599 - 591 WP_000766807.1 DUF2726 domain-containing protein -
HHJ23_RS25540 () 141637..141846 - 210 WP_001333231.1 hemolysin expression modulator Hha -
HHJ23_RS25545 () 141892..142353 - 462 WP_126755969.1 thermonuclease family protein -
HHJ23_RS25550 () 142598..142810 - 213 WP_001301409.1 ANR family transcriptional regulator -
HHJ23_RS25555 () 142942..143502 - 561 WP_001696641.1 fertility inhibition protein FinO -
HHJ23_RS25560 () 143557..144303 - 747 WP_000205718.1 conjugal transfer pilus acetylase TraX -
HHJ23_RS25565 () 144323..149593 - 5271 WP_169063304.1 Multifunctional conjugation protein TraI Relaxase
HHJ23_RS25570 () 149593..151827 - 2235 WP_169063305.1 type IV conjugative transfer system coupling protein TraD -
HHJ23_RS25575 () 151878..152615 - 738 WP_021503363.1 hypothetical protein -
HHJ23_RS25580 () 152818..153549 - 732 WP_021503382.1 complement resistance protein TraT -
HHJ23_RS25585 () 153581..154078 - 498 WP_000605862.1 entry exclusion protein -
HHJ23_RS25590 () 154097..156922 - 2826 WP_169063306.1 conjugal transfer mating pair stabilization protein TraG -
HHJ23_RS25595 () 156919..158292 - 1374 WP_001137361.1 conjugal transfer protein TraH -
HHJ23_RS25600 () 158279..158704 - 426 WP_001696605.1 F-type conjugal transfer protein TrbF -
HHJ23_RS25605 () 158652..158993 - 342 WP_001448115.1 P-type conjugative transfer protein TrbJ -
HHJ23_RS25610 () 158923..159468 - 546 WP_000059832.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
HHJ23_RS25615 () 159455..159739 - 285 WP_000623730.1 type-F conjugative transfer system pilin chaperone TraQ -
HHJ23_RS25620 () 159866..160204 - 339 WP_001287905.1 conjugal transfer protein TrbA -
HHJ23_RS25625 () 160220..160963 - 744 WP_001030371.1 type-F conjugative transfer system pilin assembly protein TraF -
HHJ23_RS25630 () 160956..161213 - 258 WP_169063310.1 conjugal transfer protein TrbE -
HHJ23_RS25635 () 161240..163069 - 1830 WP_126699664.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HHJ23_RS25640 () 163380..163760 - 381 WP_001462111.1 hypothetical protein -
HHJ23_RS25645 () 163757..164395 - 639 WP_126699662.1 type-F conjugative transfer system pilin assembly protein TrbC -
HHJ23_RS25650 () 164404..164709 - 306 WP_032198359.1 hypothetical protein -
HHJ23_RS25655 () 164739..165731 - 993 WP_049036009.1 conjugal transfer pilus assembly protein TraU -
HHJ23_RS25660 () 165728..166360 - 633 WP_027662122.1 type-F conjugative transfer system protein TraW -
HHJ23_RS25665 () 166357..166743 - 387 WP_027662123.1 type-F conjugative transfer system protein TrbI -
HHJ23_RS25670 () 166740..169370 - 2631 WP_000069752.1 type IV secretion system protein TraC -
HHJ23_RS25675 () 169702..172590 - 2889 WP_071779647.1 Tn3 family transposase TnpA_Tn3 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance