MGE detailed information
MGE type: Genomic_island MGE length: 9843 bp
Accession: NZ_CP044313 Location: 2713875..2723717 Organism: Escherichia coli strain RM11911 Replicon: chromosome
Accession: NZ_CP044313 Location: 2713875..2723717 Organism: Escherichia coli strain RM11911 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7D04_RS13620 () | 2709707..2711038 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| F7D04_RS13625 () | 2711060..2712049 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| F7D04_RS13630 () | 2712148..2713086 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| F7D04_RS13635 () | 2713275..2713619 | + | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| F7D04_RS13640 () | 2713875..2714414 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| F7D04_RS13645 () | 2714436..2715539 | + | 1104 | WP_148990315.1 | YhaC family protein | - |
| F7D04_RS13655 () | 2716541..2717686 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| F7D04_RS13660 () | 2717783..2718673 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| F7D04_RS13665 () | 2718703..2719473 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| F7D04_RS13670 () | 2719489..2720823 | - | 1335 | WP_000599653.1 | galactarate/glucarate/glycerate transporter GarP | - |
| F7D04_RS13675 () | 2721198..2722769 | + | 1572 | WP_001273761.1 | galactarate dehydratase | - |
| F7D04_RS13680 () | 2722918..2723253 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| F7D04_RS13685 () | 2723253..2723717 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| F7D04_RS13690 () | 2723772..2724581 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| F7D04_RS13695 () | 2724830..2726110 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| F7D04_RS13700 () | 2726133..2726606 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| F7D04_RS13705 () | 2726617..2727396 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| F7D04_RS13710 () | 2727386..2728264 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| F7D04_RS13715 () | 2728282..2728716 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.01 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.01 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.01 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.01 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.01 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.01 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.01 |