MGE detailed information
MGE type: Prophage MGE length: 26869 bp
Accession: NZ_CP043193 Location: 2226806..2253674 Organism: Escherichia coli O16:H48 strain PG20180063 Replicon: chromosome
Accession: NZ_CP043193 Location: 2226806..2253674 Organism: Escherichia coli O16:H48 strain PG20180063 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA14_RS10725 () | 2224181..2226607 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| FYA14_RS10730 () | 2226806..2227111 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| FYA14_RS10735 () | 2227219..2227929 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FYA14_RS10740 () | 2227932..2228492 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FYA14_RS10745 () | 2228527..2228868 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FYA14_RS10750 () | 2229003..2229329 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| FYA14_RS10755 () | 2229535..2230749 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FYA14_RS10760 () | 2230761..2231780 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FYA14_RS10770 () | 2231968..2233125 | - | 1158 | Protein_2097 | Tyrosine recombinase XerD ; Integrase | Integrase |
| FYA14_RS10775 () | 2233139..2233834 | - | 696 | Protein_2098 | IS3 family transposase IS2 | Transposase |
| FYA14_RS10780 () | 2233831..2234598 | - | 768 | Protein_2099 | exonuclease | - |
| FYA14_RS10785 () | 2234691..2234882 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FYA14_RS10790 () | 2234879..2235067 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FYA14_RS10800 () | 2235635..2235853 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| FYA14_RS10805 () | 2236013..2236168 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FYA14_RS10810 () | 2236335..2236742 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| FYA14_RS10815 () | 2236826..2237056 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| FYA14_RS10820 () | 2237040..2237318 | + | 279 | Protein_2106 | hypothetical protein | - |
| FYA14_RS10825 () | 2237353..2237502 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| FYA14_RS10830 () | 2237939..2238271 | - | 333 | WP_001301033.1 | protein FlxA | - |
| FYA14_RS10835 () | 2238474..2238779 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| FYA14_RS10840 () | 2238804..2239043 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYA14_RS10845 () | 2239043..2239330 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYA14_RS10850 () | 2239402..2239557 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYA14_RS10855 () | 2239774..2240025 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| FYA14_RS10860 () | 2240092..2240370 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| FYA14_RS10865 () | 2240372..2241421 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FYA14_RS10870 () | 2241435..2242187 | + | 753 | WP_001047135.1 | antitermination protein | - |
| FYA14_RS10875 () | 2242465..2242554 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| FYA14_RS10880 () | 2242609..2242821 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FYA14_RS10885 () | 2243122..2243337 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FYA14_RS23365 () | 2243701..2243871 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| FYA14_RS10890 () | 2244091..2244306 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FYA14_RS10895 () | 2244311..2244622 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| FYA14_RS10900 () | 2244619..2245152 | + | 534 | WP_001092971.1 | lysozyme | - |
| FYA14_RS10905 () | 2245149..2245646 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FYA14_RS10910 () | 2246009..2246221 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYA14_RS10915 () | 2246232..2246420 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| FYA14_RS10920 () | 2246423..2246488 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| FYA14_RS10925 () | 2246567..2246722 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| FYA14_RS10930 () | 2246894..2247067 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FYA14_RS10935 () | 2247219..2247629 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FYA14_RS10940 () | 2247687..2247920 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FYA14_RS10945 () | 2248309..2248878 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| FYA14_RS10950 () | 2248829..2249791 | + | 963 | WP_001027733.1 | phage tail protein | - |
| FYA14_RS10955 () | 2249791..2250366 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| FYA14_RS10960 () | 2250464..2251054 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FYA14_RS10965 () | 2251371..2251604 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| FYA14_RS10970 () | 2251673..2251786 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| FYA14_RS10975 () | 2252307..2253674 | + | 1368 | Protein_2138 | MHS family MFS transporter | - |
| FYA14_RS10980 () | 2253763..2255223 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| FYA14_RS10985 () | 2255258..2255461 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FYA14_RS10990 () | 2255638..2256324 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FYA14_RS10995 () | 2256413..2257159 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.007 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.007 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.009 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.004 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.007 |