MGE detailed information
MGE type: Prophage MGE length: 25743 bp
Accession: NZ_CP043185 Location: 360597..386339 Organism: Escherichia coli O16:H48 strain PG20180171 Replicon: chromosome
Accession: NZ_CP043185 Location: 360597..386339 Organism: Escherichia coli O16:H48 strain PG20180171 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA18_RS01710 () | 357112..357858 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| FYA18_RS01715 () | 357947..358633 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FYA18_RS01720 () | 358810..359013 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FYA18_RS01725 () | 359048..360508 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| FYA18_RS01730 () | 360597..361964 | - | 1368 | Protein_341 | MHS family MFS transporter | - |
| FYA18_RS01735 () | 362485..362598 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| FYA18_RS01740 () | 362667..362900 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FYA18_RS01745 () | 363217..363807 | + | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FYA18_RS01750 () | 363905..364480 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| FYA18_RS01755 () | 364480..365442 | - | 963 | WP_001027733.1 | phage tail protein | - |
| FYA18_RS01760 () | 365393..365962 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| FYA18_RS01765 () | 366351..366584 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FYA18_RS01770 () | 366642..367052 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FYA18_RS01775 () | 367204..367377 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FYA18_RS01780 () | 367549..367704 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| FYA18_RS01785 () | 367783..367848 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| FYA18_RS01790 () | 367851..368039 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| FYA18_RS01795 () | 368050..368262 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FYA18_RS01800 () | 368625..369122 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FYA18_RS01805 () | 369119..369652 | - | 534 | WP_001092971.1 | lysozyme | - |
| FYA18_RS01810 () | 369649..369960 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| FYA18_RS01815 () | 369965..370180 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FYA18_RS22735 () | 370400..370570 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| FYA18_RS01820 () | 370934..371149 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FYA18_RS01825 () | 371450..371662 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FYA18_RS01830 () | 371717..371806 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| FYA18_RS01835 () | 372084..372836 | - | 753 | WP_001047135.1 | antitermination protein | - |
| FYA18_RS01840 () | 372850..373899 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FYA18_RS01845 () | 373901..374179 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| FYA18_RS01850 () | 374246..374497 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| FYA18_RS01855 () | 374714..374869 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FYA18_RS01860 () | 374941..375228 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FYA18_RS01865 () | 375228..375467 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FYA18_RS01870 () | 375492..375797 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| FYA18_RS01875 () | 376000..376332 | + | 333 | WP_001301033.1 | protein FlxA | - |
| FYA18_RS01880 () | 376769..376918 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| FYA18_RS01885 () | 376953..377231 | - | 279 | Protein_373 | hypothetical protein | - |
| FYA18_RS01890 () | 377215..377445 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| FYA18_RS01895 () | 377529..377936 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| FYA18_RS01900 () | 378103..378258 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| FYA18_RS01905 () | 378418..378636 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| FYA18_RS01915 () | 379204..379392 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FYA18_RS01920 () | 379389..379580 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FYA18_RS01925 () | 379673..380440 | + | 768 | Protein_380 | exonuclease | - |
| FYA18_RS01930 () | 380437..381132 | + | 696 | Protein_381 | IS3 family transposase IS2 | Transposase |
| FYA18_RS01935 () | 381146..382303 | + | 1158 | Protein_382 | DNA polymerase II ; Integrase | Integrase |
| FYA18_RS01945 () | 382491..383510 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FYA18_RS01950 () | 383522..384736 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FYA18_RS01955 () | 384942..385268 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| FYA18_RS01960 () | 385403..385744 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FYA18_RS01965 () | 385779..386339 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FYA18_RS01970 () | 386342..387052 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FYA18_RS01975 () | 387160..387465 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| FYA18_RS01980 () | 387664..390090 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.004 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.008 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.008 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.003 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.008 |