MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 131974 bp
Accession: NZ_CP041755 Location: 1..131974 Organism: Pseudomonas sp. KBS0707 Replicon: plasmid unnamed1
Accession: NZ_CP041755 Location: 1..131974 Organism: Pseudomonas sp. KBS0707 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFH21_RS28680 () | 1..1314 | + | 1314 | WP_032489053.1 | replication initiation protein | - |
| FFH21_RS28685 () | 1444..2324 | - | 881 | Protein_1 | IS91 family transposase IS801 | Transposase |
| FFH21_RS28695 () | 2504..2692 | + | 189 | WP_002556028.1 | hypothetical protein | Antitoxin Detail |
| FFH21_RS28700 () | 2692..2973 | + | 282 | WP_002556029.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFH21_RS28705 () | 3125..4672 | - | 1548 | WP_041924905.1 | glycoside hydrolase family 28 protein | - |
| FFH21_RS28710 () | 4756..4980 | - | 225 | WP_041924893.1 | carbon storage regulator | - |
| FFH21_RS28715 () | 5084..5266 | - | 183 | WP_004661237.1 | hypothetical protein | - |
| FFH21_RS28720 () | 5696..6010 | - | 315 | WP_081002620.1 | hypothetical protein | - |
| FFH21_RS28725 () | 6109..6393 | - | 285 | WP_011282457.1 | type III effector HopW1-1, truncated | - |
| FFH21_RS28730 () | 7429..8976 | + | 1548 | WP_041924894.1 | hypothetical protein | - |
| FFH21_RS28735 () | 9092..10315 | - | 1224 | WP_041924895.1 | type III secretion system effector HopQ1-1 | - |
| FFH21_RS28745 () | 10573..11797 | + | 1225 | Protein_11 | IS91 family transposase ISPsy3 | Transposase |
| FFH21_RS28755 () | 11931..12521 | - | 591 | Protein_12 | IS256 family transposase ISPsy17 | Transposase |
| FFH21_RS28760 () | 12707..13589 | - | 883 | Protein_13 | IS91 family transposase ISPsy3 | Transposase |
| FFH21_RS30285 () | 13738..13818 | - | 81 | Protein_14 | IS91 family transposase ISPsy3 | Transposase |
| FFH21_RS28765 () | 13816..14169 | - | 354 | Protein_15 | IS91 family transposase ISPsy3 | Transposase |
| FFH21_RS28775 () | 14547..15863 | - | 1317 | WP_011282482.1 | hypothetical protein | - |
| FFH21_RS28780 () | 15866..16282 | - | 417 | WP_011282483.1 | hypothetical protein | - |
| FFH21_RS30290 () | 17457..17621 | - | 165 | Protein_18 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FFH21_RS28795 () | 17829..18106 | + | 278 | Protein_19 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FFH21_RS28800 () | 18106..18393 | + | 288 | WP_005622028.1 | helix-turn-helix domain-containing protein | - |
| FFH21_RS28805 () | 18455..18868 | + | 414 | WP_011282452.1 | hypothetical protein | - |
| FFH21_RS28815 () | 19103..19315 | + | 213 | Protein_22 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| FFH21_RS28825 () | 20122..20466 | + | 345 | WP_054082685.1 | hypothetical protein | - |
| FFH21_RS28835 () | 20614..21909 | - | 1296 | WP_011282490.1 | glycoside hydrolase family 68 protein | - |
| FFH21_RS28840 () | 21921..22112 | - | 192 | WP_003381760.1 | Com family DNA-binding transcriptional regulator | - |
| FFH21_RS28845 () | 22149..22358 | + | 210 | Protein_26 | hypothetical protein | - |
| FFH21_RS28850 () | 22602..24551 | - | 1950 | WP_011282440.1 | putative signaling protein | VF |
| FFH21_RS28855 () | 24751..25266 | + | 516 | Protein_28 | IS110 family transposase ISPsy16 | Transposase |
| FFH21_RS28870 () | 26028..28298 | + | 2271 | WP_032704248.1 | hypothetical protein | - |
| FFH21_RS28875 () | 28301..28471 | - | 171 | Protein_30 | IS3 family transposase ISPen2 | Transposase |
| FFH21_RS28880 () | 28704..29048 | + | 345 | Protein_31 | conjugal transfer protein | - |
| FFH21_RS28885 () | 29038..29415 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| FFH21_RS28890 () | 29412..29612 | - | 201 | WP_004644067.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| FFH21_RS28895 () | 29704..30384 | + | 681 | Protein_34 | hypothetical protein | - |
| FFH21_RS28900 () | 30371..30640 | + | 270 | Protein_35 | type IV secretory system conjugative DNA transfer family protein | - |
| FFH21_RS28910 () | 30898..32130 | - | 1233 | Protein_36 | IS91 family transposase IS801 | Transposase |
| FFH21_RS28920 () | 32342..32572 | + | 231 | WP_019331426.1 | hypothetical protein | - |
| FFH21_RS28925 () | 32662..33201 | + | 540 | WP_050772298.1 | hypothetical protein | - |
| FFH21_RS28930 () | 34062..36092 | - | 2031 | WP_011282448.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| FFH21_RS28935 () | 36956..37291 | - | 336 | Protein_40 | hypothetical protein | - |
| FFH21_RS28945 () | 37473..38705 | - | 1233 | Protein_41 | IS91 family transposase IS801 | Transposase |
| FFH21_RS28955 () | 38807..39580 | - | 774 | Protein_42 | HNH endonuclease | - |
| FFH21_RS28960 () | 39778..40407 | + | 630 | WP_004666923.1 | AAA family ATPase | - |
| FFH21_RS28965 () | 40428..40646 | + | 219 | WP_011282472.1 | chromosome partitioning protein ParB | - |
| FFH21_RS28970 () | 41009..41290 | + | 282 | Protein_45 | SOS response-associated peptidase family protein | - |
| FFH21_RS28975 () | 41595..42077 | + | 483 | Protein_46 | IS21 family transposase ISAri1 | Transposase |
| FFH21_RS28980 () | 42535..42774 | + | 240 | WP_041924897.1 | ribbon-helix-helix domain-containing protein | - |
| FFH21_RS28985 () | 42774..43184 | + | 411 | WP_011282461.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| FFH21_RS28990 () | 43188..43337 | + | 150 | Protein_49 | DUF4158 domain-containing protein | - |
| FFH21_RS29000 () | 43519..44751 | - | 1233 | Protein_50 | IS91 family transposase IS801 | Transposase |
| FFH21_RS29025 () | 45756..47786 | + | 2031 | WP_038820374.1 | hypothetical protein | - |
| FFH21_RS29030 () | 48047..48307 | - | 261 | Protein_52 | IS3 family transposase | - |
| FFH21_RS29035 () | 48490..48615 | - | 126 | Protein_53 | IS5/IS1182 family transposase | - |
| FFH21_RS29040 () | 48611..48871 | - | 261 | WP_081004486.1 | DUF2513 domain-containing protein | - |
| FFH21_RS29045 () | 49055..50205 | + | 1151 | WP_086004872.1 | IS3 family transposase ISPsy29 | Transposase |
| FFH21_RS29050 () | 50392..51390 | + | 999 | WP_011282438.1 | LysR family transcriptional regulator | - |
| FFH21_RS29055 () | 51642..52379 | + | 738 | WP_011282422.1 | Chaperone protein caf1M | VF |
| FFH21_RS29060 () | 52413..54908 | + | 2496 | WP_011282475.1 | F1 capsule-anchoring protein | VF |
| FFH21_RS29065 () | 54901..55350 | + | 450 | WP_011282491.1 | invasin protein AfaD | - |
| FFH21_RS29070 () | 55425..55985 | + | 561 | WP_054073162.1 | hypothetical protein | - |
| FFH21_RS29075 () | 57094..58197 | + | 1104 | WP_004663854.1 | IS5 family transposase ISPsy19 | Transposase |
| FFH21_RS29085 () | 58484..59119 | + | 636 | WP_011282469.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FFH21_RS29090 () | 59297..59485 | + | 189 | WP_002556028.1 | hypothetical protein | Antitoxin Detail |
| FFH21_RS29095 () | 59485..59766 | + | 282 | WP_002556029.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFH21_RS29100 () | 59918..61465 | - | 1548 | WP_041924905.1 | glycoside hydrolase family 28 protein | - |
| FFH21_RS29105 () | 61549..61773 | - | 225 | WP_041924893.1 | carbon storage regulator | - |
| FFH21_RS29110 () | 61877..62059 | - | 183 | WP_004661237.1 | hypothetical protein | - |
| FFH21_RS29115 () | 62489..62803 | - | 315 | WP_081002620.1 | hypothetical protein | - |
| FFH21_RS29120 () | 62902..63186 | - | 285 | WP_011282457.1 | type III effector HopW1-1, truncated | - |
| FFH21_RS29125 () | 63349..63624 | - | 276 | Protein_70 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| FFH21_RS29130 () | 64074..64523 | - | 450 | WP_005760341.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| FFH21_RS29140 () | 64998..66230 | - | 1233 | Protein_72 | IS91 family transposase IS801 | Transposase |
| FFH21_RS29145 () | 66351..66554 | - | 204 | Protein_73 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| FFH21_RS29155 () | 66651..68264 | - | 1614 | WP_041924899.1 | Methyl-accepting chemotaxis protein CtpH | VF |
| FFH21_RS29165 () | 68691..69794 | - | 1104 | WP_004663854.1 | IS5 family transposase ISPsy19 | Transposase |
| FFH21_RS29170 () | 69947..70393 | + | 447 | Protein_76 | IS91 family transposase ISPsy3 | Transposase |
| FFH21_RS29175 () | 70394..71080 | + | 687 | Protein_77 | IS91 family transposase ISPsy3 | Transposase |
| FFH21_RS29185 () | 71364..72596 | + | 1233 | Protein_78 | IS91 family transposase IS801 | Transposase |
| FFH21_RS29190 () | 72777..73778 | - | 1002 | Protein_79 | IS110 family transposase ISPsy16 | Transposase |
| FFH21_RS29195 () | 73889..74578 | - | 690 | Protein_80 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| FFH21_RS29200 () | 74586..75240 | - | 655 | Protein_81 | hypothetical protein | - |
| FFH21_RS29205 () | 75710..76375 | - | 666 | WP_011282487.1 | hypothetical protein | - |
| FFH21_RS29210 () | 76633..76854 | - | 222 | Protein_83 | hypothetical protein | - |
| FFH21_RS29220 () | 78409..78711 | + | 303 | WP_050772301.1 | hypothetical protein | - |
| FFH21_RS29225 () | 78668..79993 | + | 1326 | WP_011282502.1 | SIR2 family protein | - |
| FFH21_RS29230 () | 80009..80833 | + | 825 | WP_134933068.1 | hypothetical protein | - |
| FFH21_RS29235 () | 80851..81813 | - | 963 | WP_054072957.1 | IS91 family transposase ISTha3 | Transposase |
| FFH21_RS29240 () | 82145..82393 | + | 249 | WP_004662018.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FFH21_RS29245 () | 82406..82756 | + | 351 | WP_004666861.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFH21_RS30140 () | 83916..84080 | + | 165 | WP_004666862.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| FFH21_RS29255 () | 84191..85225 | + | 1035 | WP_011168770.1 | IS110 family transposase ISPsy16 | Transposase |
| FFH21_RS29260 () | 85797..87746 | + | 1950 | WP_011282440.1 | putative signaling protein | VF |
| FFH21_RS29265 () | 87835..88938 | + | 1104 | WP_004663854.1 | IS5 family transposase ISPsy19 | Transposase |
| FFH21_RS29270 () | 88975..89586 | + | 612 | WP_011282455.1 | Tn3 family transposase ISPsy39 | Transposase |
| FFH21_RS29275 () | 89656..89943 | + | 288 | WP_004661624.1 | hypothetical protein | - |
| FFH21_RS29280 () | 89943..90221 | + | 279 | WP_004661626.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| FFH21_RS29290 () | 90610..90846 | - | 237 | WP_004667076.1 | carbon storage regulator | - |
| FFH21_RS29295 () | 91052..91630 | - | 579 | WP_004661630.1 | AAA family ATPase | - |
| FFH21_RS29300 () | 91630..92286 | - | 657 | WP_007247578.1 | hypothetical protein | - |
| FFH21_RS29305 () | 92323..93525 | - | 1203 | WP_081002653.1 | aspartate aminotransferase family protein | - |
| FFH21_RS29310 () | 93566..94600 | - | 1035 | WP_004661635.1 | sulfotransferase | - |
| FFH21_RS29315 () | 94618..95538 | - | 921 | WP_005620530.1 | TauD/TfdA family dioxygenase | - |
| FFH21_RS29320 () | 95684..96331 | - | 648 | WP_004667074.1 | histidine phosphatase family protein | - |
| FFH21_RS29325 () | 96572..97507 | - | 936 | WP_011282454.1 | syringolide biosynthetic protein AvrD1 | - |
| FFH21_RS29335 () | 97803..97961 | + | 159 | Protein_106 | IS3 family transposase ISPsy24 | Transposase |
| FFH21_RS29340 () | 98103..98567 | - | 465 | Protein_107 | IS256 family transposase ISPsy17 | Transposase |
| FFH21_RS29345 () | 99060..99716 | + | 657 | Protein_108 | IS256 family transposase ISPsy17 | Transposase |
| FFH21_RS29355 () | 99779..100486 | - | 708 | Protein_109 | IS5 family transposase ISPsy2 | Transposase |
| FFH21_RS29365 () | 100941..101696 | + | 756 | Protein_110 | IS91 family transposase IS801 | Transposase |
| FFH21_RS29370 () | 101695..102054 | - | 360 | Protein_111 | transposase zinc-binding domain-containing protein | - |
| FFH21_RS29380 () | 102154..103212 | - | 1059 | WP_011282442.1 | avirulence protein | - |
| FFH21_RS29395 () | 104245..104485 | + | 241 | Protein_113 | recombinase family protein | - |
| FFH21_RS29400 () | 104535..105191 | - | 657 | WP_011282458.1 | YopT-type cysteine protease domain-containing protein | - |
| FFH21_RS30145 () | 105501..106398 | - | 898 | Protein_115 | ExeA family protein | - |
| FFH21_RS30150 () | 106386..106535 | - | 150 | WP_011282493.1 | hypothetical protein | - |
| FFH21_RS29415 () | 106558..106662 | + | 105 | Protein_117 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FFH21_RS29420 () | 106828..108447 | - | 1620 | WP_011282445.1 | type III secretion system effector protein HopAB1 | - |
| FFH21_RS29425 () | 108900..109934 | - | 1035 | WP_011168770.1 | IS110 family transposase ISPsy16 | Transposase |
| FFH21_RS30155 () | 110045..110209 | - | 165 | WP_178114231.1 | hypothetical protein | - |
| FFH21_RS29430 () | 110542..111363 | + | 822 | WP_041924904.1 | C58 family peptidase | - |
| FFH21_RS29435 () | 111402..111590 | + | 189 | Protein_122 | helix-turn-helix domain-containing protein | - |
| FFH21_RS29445 () | 111804..112303 | + | 500 | Protein_123 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| FFH21_RS29450 () | 112414..113448 | + | 1035 | WP_011168770.1 | IS110 family transposase ISPsy16 | Transposase |
| FFH21_RS29455 () | 113746..120201 | - | 6456 | WP_011282500.1 | hypothetical protein | - |
| FFH21_RS29465 () | 120769..121401 | - | 633 | WP_004666965.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FFH21_RS29470 () | 121442..121861 | - | 420 | WP_004661570.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FFH21_RS29475 () | 121858..122115 | - | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| FFH21_RS29480 () | 122580..123284 | + | 705 | WP_004661990.1 | ParA family protein | - |
| FFH21_RS29485 () | 123281..123604 | + | 324 | WP_004666942.1 | hypothetical protein | - |
| FFH21_RS29490 () | 123715..124074 | + | 360 | Protein_131 | SOS response-associated peptidase family protein | - |
| FFH21_RS29495 () | 124027..124689 | - | 663 | Protein_132 | IS110 family transposase | - |
| FFH21_RS29500 () | 124764..125663 | + | 900 | Protein_133 | IS3 family transposase ISPsy24 | Transposase |
| FFH21_RS29505 () | 125674..125883 | - | 210 | Protein_134 | hypothetical protein | - |
| FFH21_RS29510 () | 126001..126327 | - | 327 | WP_003319696.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| FFH21_RS29515 () | 126324..126548 | - | 225 | WP_004643921.1 | antitoxin MazE family protein | Antitoxin Detail |
| FFH21_RS29520 () | 126886..127307 | + | 422 | Protein_137 | IS3 family transposase ISPsy29 | Transposase |
| FFH21_RS29530 () | 127527..129302 | + | 1776 | Protein_138 | conjugal transfer protein | - |
| FFH21_RS29540 () | 129542..129790 | + | 249 | Protein_139 | hypothetical protein | VF |
| FFH21_RS29545 () | 129780..130313 | + | 534 | Protein_140 | Type IV secretion system protein virB9 | VF |
| FFH21_RS29550 () | 130434..131084 | + | 651 | WP_005730296.1 | AAA family ATPase | - |
| FFH21_RS29555 () | 131075..131428 | + | 354 | WP_005730297.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|