NZ_CP0362441..146792

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 146792 bp
Accession: NZ_CP036244        Location: 1..146792         Organism: Escherichia coli strain S65EC       Replicon: plasmid pS65EC


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
S65EC_RS00010 () 803..1927 + 1125 WP_032174239.1 DUF4238 domain-containing protein -
S65EC_RS00015 () 1927..2217 + 291 WP_000648897.1 hypothetical protein -
S65EC_RS00025 () 2827..4383 - 1557 WP_042068411.1 AAA family ATPase -
S65EC_RS00030 () 4648..5238 - 591 WP_086732352.1 hypothetical protein -
S65EC_RS00035 () 5238..5495 - 258 WP_000371887.1 hypothetical protein -
S65EC_RS00040 () 5824..6927 + 1104 WP_001127573.1 nucleotide-binding protein -
S65EC_RS00045 () 6957..8087 + 1131 WP_086732353.1 DUF4238 domain-containing protein -
S65EC_RS00055 () 8209..8906 + 698 Protein_8 IS1 family transposase -
S65EC_RS00060 () 8923..9270 + 348 Protein_9 ABC transporter permease subunit -
S65EC_RS00065 () 9282..10328 + 1047 WP_000192349.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
S65EC_RS00070 () 10437..11369 - 933 WP_000081352.1 homocysteine S-methyltransferase -
S65EC_RS00075 () 11356..12759 - 1404 WP_001373486.1 S-methylmethionine permease -
S65EC_RS00080 () 13003..13983 + 981 WP_000019407.1 IS5 family transposase IS5D Transposase
S65EC_RS00085 () 14211..14528 + 318 WP_001513659.1 hypothetical protein -
S65EC_RS00090 () 14478..14891 - 414 Protein_15 IS3 family transposase ISLad1 Transposase
S65EC_RS00095 () 14815..15174 - 360 WP_001513660.1 hypothetical protein -
S65EC_RS00100 () 15202..15381 - 180 WP_001513661.1 hypothetical protein -
S65EC_RS00105 () 15386..15766 - 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
S65EC_RS00110 () 15766..15987 - 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
S65EC_RS00115 () 16170..17726 + 1557 WP_001617892.1 type I restriction-modification system subunit M -
S65EC_RS00120 () 17723..19006 + 1284 WP_001617890.1 restriction endonuclease subunit S -
S65EC_RS00125 () 19128..22244 + 3117 WP_001553854.1 HsdR family type I site-specific deoxyribonuclease -
S65EC_RS00130 () 22458..22870 + 413 Protein_23 IS1 family transposase -
S65EC_RS00135 () 22947..23203 + 257 Protein_24 IS3 family transposase ISEc52 Transposase
S65EC_RS00140 () 23216..24367 - 1152 WP_058682604.1 IS30 family transposase IS30D Transposase
S65EC_RS00145 () 24432..25328 + 897 Protein_26 IS3 family transposase ISEhe3 Transposase
S65EC_RS00150 () 25430..25711 + 282 WP_000639434.1 hypothetical protein -
S65EC_RS00155 () 25812..26509 - 698 Protein_28 IS1 family transposase IS1R Transposase
S65EC_RS00160 () 26619..27944 + 1326 WP_021512928.1 pyridine nucleotide-disulfide oxidoreductase -
S65EC_RS00165 () 28093..28797 - 705 WP_001505086.1 IS6-like element IS26 family transposase -
S65EC_RS00170 () 28863..29294 + 432 WP_086732424.1 hypothetical protein -
S65EC_RS00175 () 29291..30082 + 792 WP_032151908.1 site-specific integrase -
S65EC_RS00180 () 30220..30495 - 276 WP_000239529.1 hypothetical protein -
S65EC_RS00185 () 30489..31133 - 645 WP_000633913.1 AAA family ATPase -
S65EC_RS00190 () 31362..32333 + 972 WP_001103691.1 hypothetical protein -
S65EC_RS00195 () 32338..32730 + 393 WP_000340829.1 plasmid partitioning/stability family protein -
S65EC_RS00200 () 32735..34006 - 1272 WP_021563940.1 Y-family DNA polymerase -
S65EC_RS00205 () 34006..34443 - 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
S65EC_RS00210 () 34440..34688 - 249 WP_000618110.1 DinI-like family protein -
S65EC_RS00220 () 35106..36008 + 903 WP_001348615.1 DUF1281 domain-containing protein -
S65EC_RS00225 () 36012..36316 + 305 Protein_41 hypothetical protein -
S65EC_RS00230 () 36393..37076 + 684 WP_000086185.1 DNA methylase -
S65EC_RS00235 () 37077..37298 + 222 WP_001104873.1 hypothetical protein -
S65EC_RS00240 () 37312..37746 + 435 WP_086732423.1 DUF1380 family protein -
S65EC_RS00245 () 37797..38573 + 777 WP_001753849.1 hypothetical protein -
S65EC_RS00255 () 39113..39415 + 303 WP_001671341.1 antirestriction protein -
S65EC_RS00260 () 39462..39884 + 423 WP_000271762.1 DUF1380 family protein -
S65EC_RS00265 () 39881..40072 + 192 WP_001027493.1 hypothetical protein -
S65EC_RS00275 () 41108..41338 + 231 WP_000218642.1 hypothetical protein -
S65EC_RS00280 () 41390..42751 + 1362 WP_038999961.1 DUF3560 domain-containing protein -
S65EC_RS00285 () 42799..43362 + 564 WP_001315564.1 class I SAM-dependent methyltransferase -
S65EC_RS00290 () 43388..43588 + 201 WP_025492130.1 hypothetical protein -
S65EC_RS26965 () 43751..44086 + 336 WP_014106969.1 hypothetical protein -
S65EC_RS26970 () 43999..44205 + 207 WP_000275853.1 hypothetical protein -
S65EC_RS00315 () 44231..44770 + 540 WP_000290841.1 single-stranded DNA-binding protein -
S65EC_RS00320 () 44833..45066 + 234 WP_000005990.1 DUF905 family protein -
S65EC_RS00325 () 45132..47090 + 1959 WP_086732397.1 ParB/RepB/Spo0J family partition protein -
S65EC_RS00330 () 47145..47579 + 435 WP_000845940.1 conjugation system SOS inhibitor PsiB -
S65EC_RS00335 () 47576..48295 + 720 WP_001276232.1 plasmid SOS inhibition protein A -
S65EC_RS26810 () 48307..48495 - 189 WP_001299721.1 hypothetical protein -
- () 48307..48531 + 225 NuclAT_0 - -
- () 48307..48531 + 225 NuclAT_0 - -
- () 48307..48531 + 225 NuclAT_0 - -
- () 48307..48531 + 225 NuclAT_0 - -
S65EC_RS00340 () 48575..48733 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
S65EC_RS00360 () 49655..49942 + 288 WP_000107535.1 hypothetical protein -
S65EC_RS00365 () 50062..50883 + 822 WP_001234469.1 DUF945 domain-containing protein -
S65EC_RS00370 () 51180..51782 - 603 WP_000243712.1 hypothetical protein VF
S65EC_RS00375 () 52113..52496 + 384 WP_001151566.1 relaxosome protein TraM -
S65EC_RS00380 () 52630..53307 + 678 WP_001348626.1 PAS domain-containing protein -
S65EC_RS00385 () 53395..53622 + 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
S65EC_RS00390 () 53656..54018 + 363 WP_000338606.1 type IV conjugative transfer system pilin TraA -
S65EC_RS00395 () 54023..54334 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
S65EC_RS00400 () 54356..54922 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
S65EC_RS00405 () 54933..55637 + 705 WP_165395304.1 type-F conjugative transfer system secretin TraK -
S65EC_RS00410 () 55637..57088 + 1452 WP_000146647.1 conjugal transfer protein TraB -
S65EC_RS00415 () 57057..57644 + 588 WP_071587349.1 conjugal transfer protein TraP -
S65EC_RS00420 () 57583..57942 + 360 WP_001617876.1 conjugal transfer protein TrbD -
S65EC_RS00425 () 57942..58457 + 516 WP_001403433.1 type IV conjugative transfer system lipoprotein TraV -
S65EC_RS00430 () 58592..58813 + 222 WP_001278694.1 conjugal transfer protein TraR -
S65EC_RS00435 () 58973..61600 + 2628 WP_001505126.1 type IV secretion system protein TraC -
S65EC_RS00440 () 61597..61983 + 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
S65EC_RS00445 () 61980..62612 + 633 WP_001203727.1 type-F conjugative transfer system protein TraW -
S65EC_RS00450 () 62609..63601 + 993 WP_000830190.1 conjugal transfer pilus assembly protein TraU -
S65EC_RS00455 () 63631..63936 + 306 WP_000224413.1 hypothetical protein -
S65EC_RS00460 () 63945..64583 + 639 WP_001080259.1 type-F conjugative transfer system pilin assembly protein TrbC -
S65EC_RS00465 () 64580..66430 + 1851 WP_000821866.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
S65EC_RS00470 () 66457..66714 + 258 WP_000864347.1 conjugal transfer protein TrbE -
S65EC_RS00475 () 66707..67450 + 744 WP_001403429.1 type-F conjugative transfer system pilin assembly protein TraF -
S65EC_RS00480 () 67466..67804 + 339 WP_086732396.1 conjugal transfer protein TrbA -
S65EC_RS00485 () 67931..68215 + 285 WP_001617873.1 type-F conjugative transfer system pilin chaperone TraQ -
S65EC_RS00490 () 68202..68747 + 546 WP_000059829.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
S65EC_RS00495 () 68677..69024 + 348 WP_071571857.1 P-type conjugative transfer protein TrbJ -
S65EC_RS00500 () 68972..69397 + 426 WP_001348758.1 F-type conjugal transfer protein TrbF -
S65EC_RS00505 () 69384..70757 + 1374 WP_001403427.1 conjugal transfer protein TraH -
S65EC_RS00510 () 70754..72655 + 1902 Protein_92 conjugal transfer mating pair stabilization protein TraG -
S65EC_RS00515 () 72687..73833 - 1147 Protein_93 IS3 family transposase ISEc52 Transposase
S65EC_RS00520 () 73905..74828 + 924 Protein_94 conjugal transfer protein TraG -
S65EC_RS00525 () 74844..75329 + 486 WP_086732395.1 surface exclusion protein -
S65EC_RS00530 () 75378..76109 + 732 WP_001403424.1 complement resistance protein TraT -
S65EC_RS00535 () 76313..76792 + 480 WP_025861836.1 hypothetical protein -
S65EC_RS00540 () 77074..78540 + 1467 Protein_98 type IV conjugative transfer system coupling protein TraD -
S65EC_RS00545 () 78627..79052 + 426 WP_000422741.1 IS66 family transposase ISEc23 Transposase
S65EC_RS00550 () 79049..79399 + 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
S65EC_RS00555 () 79430..81042 + 1613 Protein_101 IS66 family transposase ISEc23 Transposase
S65EC_RS00560 () 81074..81784 + 711 Protein_102 type IV secretion system DNA-binding domain-containing protein -
S65EC_RS00565 () 81784..87054 + 5271 WP_096967568.1 Multifunctional conjugation protein TraI Relaxase
S65EC_RS00570 () 87074..87820 + 747 WP_000205718.1 conjugal transfer pilus acetylase TraX -
S65EC_RS00575 () 87875..88435 + 561 WP_000139341.1 fertility inhibition protein FinO -
S65EC_RS00580 () 88566..88778 + 213 WP_013023861.1 hypothetical protein -
S65EC_RS26815 () 89291..89577 + 287 Protein_107 DUF2726 domain-containing protein -
- () 89544..89595 - 52 NuclAT_1 - Antitoxin Detail
- () 89544..89595 - 52 NuclAT_1 - Antitoxin Detail
- () 89544..89595 - 52 NuclAT_1 - Antitoxin Detail
- () 89544..89595 - 52 NuclAT_1 - Antitoxin Detail
S65EC_RS00595 () 89641..89775 + 135 WP_023144756.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
S65EC_RS00600 () 90072..90326 + 255 WP_000083850.1 replication regulatory protein RepA -
S65EC_RS26975 () 90432..90566 + 135 Protein_110 protein CopA/IncA -
S65EC_RS00605 () 90563..90637 + 75 WP_031943482.1 RepA leader peptide Tap -
S65EC_RS00610 () 90630..91487 + 858 WP_032265352.1 incFII family plasmid replication initiator RepA -
S65EC_RS26820 () 92191..92331 + 141 WP_165395303.1 hypothetical protein -
S65EC_RS00625 () 92387..92641 + 255 WP_000108831.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
S65EC_RS00630 () 92631..92916 + 286 Protein_115 type II toxin-antitoxin system RelE/ParE family toxin -
S65EC_RS00635 () 93282..93947 - 666 WP_086732345.1 EAL domain-containing protein -
S65EC_RS00640 () 94090..94803 - 714 WP_086732346.1 Protein SapB VF
S65EC_RS00645 () 94867..95886 - 1020 WP_077758491.1 nucleoside hydrolase -
S65EC_RS00650 () 95861..96892 - 1032 WP_000194408.1 LacI family transcriptional regulator -
S65EC_RS00655 () 96998..98392 - 1395 WP_050488426.1 MHS family MFS transporter -
S65EC_RS00660 () 98590..98721 - 132 Protein_121 Rpn family recombination-promoting nuclease/putative transposase -
S65EC_RS00665 () 98995..99375 + 381 WP_000621515.1 aspartate 1-decarboxylase -
S65EC_RS00670 () 99379..99619 - 241 Protein_123 polysaccharide deacetylase family protein -
S65EC_RS00680 () 99917..100768 - 852 WP_086732347.1 pantoate--beta-alanine ligase -
S65EC_RS00685 () 100780..101397 - 618 Protein_125 3-methyl-2-oxobutanoate hydroxymethyltransferase -
S65EC_RS00690 () 101399..101611 + 213 Protein_126 IS3 family transposase ISCfr6 Transposase
S65EC_RS00695 () 101687..102685 - 999 WP_001403395.1 Arabinose 5-phosphate isomerase KdsD VF
S65EC_RS00700 () 102837..103544 + 708 WP_002431139.1 DeoR/GlpR family DNA-binding transcription regulator -
S65EC_RS00705 () 103577..104878 + 1302 WP_001403397.1 four-carbon acid sugar kinase family protein -
S65EC_RS00710 () 104901..105899 + 999 WP_000803224.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA -
S65EC_RS00715 () 105938..107488 + 1551 WP_000127288.1 gluconate permease -
S65EC_RS00720 () 107797..108216 + 420 WP_000435405.1 IS66 family transposase IS682 Transposase
S65EC_RS00730 () 108265..109316 - 1052 Protein_133 IS3 family transposase IS629 Transposase
S65EC_RS00735 () 109381..110085 + 705 WP_001505086.1 IS6 family transposase IS26 Transposase
S65EC_RS00740 () 110143..110673 - 531 Protein_135 histidine-type phosphatase -
S65EC_RS00745 () 110795..111280 - 486 WP_000874189.1 hypothetical protein -
S65EC_RS00750 () 111305..111790 - 486 WP_001554949.1 TlpA family protein disulfide reductase -
S65EC_RS00755 () 111777..112472 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
S65EC_RS00760 () 112477..113607 - 1131 WP_000729219.1 ABC transporter permease -
S65EC_RS00765 () 113597..114880 - 1284 WP_000964653.1 ABC transporter permease -
S65EC_RS00770 () 114883..116262 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
S65EC_RS00775 () 116366..116893 - 528 WP_000178050.1 iron transporter -
S65EC_RS00780 () 116934..118820 - 1887 WP_001332815.1 FTR1 family iron permease -
S65EC_RS00790 () 119168..119983 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
S65EC_RS00795 () 120224..120928 - 705 WP_086732349.1 IS6 family transposase IS26 Transposase
S65EC_RS00800 () 120991..121170 - 180 Protein_146 IS21 family transposase ISSso4 Transposase
S65EC_RS00805 () 121187..122710 - 1524 WP_130647888.1 IS21 family transposase ISSso4 Transposase
S65EC_RS00810 () 122937..123245 + 309 Protein_148 IS4 family transposase ISEc13 Transposase
S65EC_RS00815 () 123304..124614 - 1311 WP_000476108.1 ABC transporter substrate-binding protein -
S65EC_RS00820 () 124607..125680 - 1074 WP_130647889.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
S65EC_RS00825 () 125686..126510 - 825 WP_000922702.1 phosphodiesterase -
S65EC_RS00830 () 126521..127408 - 888 WP_001271561.1 carbohydrate ABC transporter permease -
S65EC_RS00835 () 127398..128276 - 879 WP_000338039.1 sugar ABC transporter permease -
S65EC_RS00840 () 128407..128847 - 441 Protein_154 zinc-binding dehydrogenase -
S65EC_RS00850 () 129248..130138 + 891 WP_001077068.1 dihydrodipicolinate synthase family protein -
S65EC_RS00855 () 130163..130543 + 381 WP_000710783.1 Rid family detoxifying hydrolase -
S65EC_RS00860 () 130576..131541 + 966 WP_001022265.1 2-keto-3-deoxygluconate transporter -
S65EC_RS00865 () 131587..132339 - 753 WP_001403368.1 IclR family transcriptional regulator -
S65EC_RS00870 () 132944..133228 + 285 WP_001387467.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
S65EC_RS00875 () 133228..133503 + 276 WP_000421272.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
S65EC_RS00880 () 133609..133902 + 294 WP_086732350.1 hypothetical protein -
S65EC_RS00885 () 133937..134065 - 129 Protein_162 IS481 family transposase -
S65EC_RS00890 () 134098..135267 - 1170 WP_086732351.1 hypothetical protein -
S65EC_RS00900 () 135760..136067 + 308 Protein_164 type II toxin-antitoxin system ParD family antitoxin -
S65EC_RS00905 () 136183..136344 + 162 WP_001440647.1 type II toxin-antitoxin system RelE/ParE family toxin -
S65EC_RS00910 () 136411..136593 + 183 WP_042065278.1 hypothetical protein -
S65EC_RS00915 () 136714..137454 + 741 WP_001066940.1 tyrosine-type recombinase/integrase -
S65EC_RS00920 () 137777..138766 - 990 WP_024201093.1 RepB family plasmid replication initiator protein -
S65EC_RS00925 () 139654..139923 + 270 WP_001275013.1 DUF1778 domain-containing protein Antitoxin Detail
S65EC_RS00930 () 139927..140457 + 531 WP_000348883.1 GNAT family N-acetyltransferase Toxin Detail
S65EC_RS00935 () 140458..140675 + 218 Protein_171 transposase -
S65EC_RS00940 () 140680..140955 - 276 WP_001403920.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
S65EC_RS00945 () 141044..141274 - 231 WP_001261274.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
S65EC_RS00950 () 141473..144094 - 2622 WP_000283688.1 histidinol-phosphatase -
S65EC_RS00955 () 144485..144976 + 492 WP_000528930.1 hypothetical protein -
S65EC_RS00960 () 144988..145746 + 759 WP_032174241.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance