MGE detailed information
MGE type: Prophage MGE length: 40359 bp
Accession: NZ_CP032667 Location: 2218134..2258492 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP032667 Location: 2218134..2258492 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8B36_RS10935 () | 2214033..2215253 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| D8B36_RS10940 () | 2215378..2216073 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| D8B36_RS10945 () | 2216026..2217318 | - | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| D8B36_RS10950 () | 2217477..2218091 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| D8B36_RS10955 () | 2218134..2218988 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| D8B36_RS10960 () | 2218990..2219607 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| D8B36_RS10965 () | 2219618..2222041 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| D8B36_RS10970 () | 2222102..2224528 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| D8B36_RS10975 () | 2224727..2225032 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| D8B36_RS10980 () | 2225140..2225850 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| D8B36_RS10985 () | 2225853..2226413 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| D8B36_RS10990 () | 2226448..2226789 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| D8B36_RS10995 () | 2226924..2227250 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| D8B36_RS11000 () | 2227456..2228670 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| D8B36_RS11005 () | 2228682..2229701 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| D8B36_RS11015 () | 2229889..2231046 | - | 1158 | Protein_2096 | Putative defective protein IntQ ; Integrase | Integrase |
| D8B36_RS11020 () | 2231060..2231755 | - | 696 | Protein_2097 | IS3 family transposase IS2 | Transposase |
| D8B36_RS11025 () | 2231752..2232519 | - | 768 | Protein_2098 | exonuclease | - |
| D8B36_RS11030 () | 2232612..2232803 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| D8B36_RS11035 () | 2232800..2232988 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| D8B36_RS11045 () | 2233556..2233774 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| D8B36_RS11055 () | 2233934..2234089 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| D8B36_RS11060 () | 2234256..2234663 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| D8B36_RS11065 () | 2234747..2234977 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| D8B36_RS11070 () | 2234961..2235239 | + | 279 | Protein_2105 | hypothetical protein | - |
| D8B36_RS22995 () | 2235274..2235423 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| D8B36_RS11075 () | 2235860..2236192 | - | 333 | WP_001301033.1 | protein FlxA | - |
| D8B36_RS11080 () | 2236395..2236700 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| D8B36_RS11085 () | 2236725..2236964 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| D8B36_RS11090 () | 2236964..2237251 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| D8B36_RS11095 () | 2237323..2237478 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| D8B36_RS11100 () | 2237695..2237946 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| D8B36_RS11105 () | 2238013..2238291 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| D8B36_RS11110 () | 2238293..2239342 | + | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| D8B36_RS11115 () | 2239356..2240108 | + | 753 | WP_001047135.1 | antitermination protein | - |
| D8B36_RS23000 () | 2240386..2240475 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| D8B36_RS11120 () | 2240530..2240742 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| D8B36_RS11125 () | 2241043..2241258 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| D8B36_RS23330 () | 2241622..2241792 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| D8B36_RS11130 () | 2242012..2242227 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| D8B36_RS11135 () | 2242232..2242543 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| D8B36_RS11140 () | 2242540..2243073 | + | 534 | WP_001092971.1 | lysozyme | - |
| D8B36_RS11145 () | 2243070..2243567 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| D8B36_RS11150 () | 2243930..2244142 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| D8B36_RS11155 () | 2244153..2244341 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| D8B36_RS23005 () | 2244344..2244409 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| D8B36_RS11160 () | 2244488..2244643 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| D8B36_RS11165 () | 2244815..2244988 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| D8B36_RS11170 () | 2245140..2245550 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| D8B36_RS11175 () | 2245608..2245841 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| D8B36_RS11180 () | 2246230..2246799 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| D8B36_RS11185 () | 2246750..2247712 | + | 963 | WP_001027733.1 | phage tail protein | - |
| D8B36_RS11190 () | 2247712..2248287 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| D8B36_RS11195 () | 2248385..2248975 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| D8B36_RS11200 () | 2249292..2249525 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| D8B36_RS23010 () | 2249594..2249707 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| D8B36_RS11205 () | 2250228..2251595 | + | 1368 | Protein_2137 | MHS family MFS transporter | - |
| D8B36_RS11210 () | 2251684..2253144 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| D8B36_RS11215 () | 2253179..2253382 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| D8B36_RS11220 () | 2253559..2254245 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| D8B36_RS11225 () | 2254334..2255080 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| D8B36_RS11230 () | 2255217..2257262 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| D8B36_RS11235 () | 2257306..2257824 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| D8B36_RS11240 () | 2258100..2258492 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| D8B36_RS11245 () | 2258747..2259637 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| D8B36_RS23335 () | 2259752..2259857 | - | 106 | Protein_2146 | protein MgtT | - |
| D8B36_RS11250 () | 2259857..2259952 | - | 96 | WP_000901367.1 | protein MgtS | - |
| D8B36_RS11255 () | 2260079..2261266 | - | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| D8B36_RS11260 () | 2261461..2262360 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| D8B36_RS11265 () | 2262391..2262609 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| D8B36_RS11270 () | 2262641..2263024 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| D8B36_RS11275 () | 2263044..2263478 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.004 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.005 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.004 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.004 | |
| Escherichia coli C | Prophage | TA75071 | NZ_CP020543 | 2249542..2301270 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.004 |