MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP028741 Location: 4282761..4294435 Organism: Escherichia coli strain A34 Replicon: chromosome
Accession: NZ_CP028741 Location: 4282761..4294435 Organism: Escherichia coli strain A34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY87_RS21055 (4279086) | 4279086..4280294 | - | 1209 | WP_001358708.1 | propionate kinase | - |
| AOY87_RS21060 (4280320) | 4280320..4281651 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| AOY87_RS21065 (4281673) | 4281673..4282662 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| AOY87_RS21070 (4282761) | 4282761..4283699 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| AOY87_RS21075 (4284014) | 4284014..4284232 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| AOY87_RS21080 (4284488) | 4284488..4285027 | + | 540 | WP_000675746.1 | protein YhaB | - |
| AOY87_RS21085 (4285049) | 4285049..4286236 | + | 1188 | WP_240765682.1 | YhaC family protein | - |
| AOY87_RS21095 (4287259) | 4287259..4288404 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| AOY87_RS21100 (4288501) | 4288501..4289391 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| AOY87_RS21105 (4289421) | 4289421..4290191 | - | 771 | WP_240765683.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| AOY87_RS21110 (4290207) | 4290207..4291541 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| AOY87_RS21115 (4291916) | 4291916..4293487 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| AOY87_RS21120 (4293636) | 4293636..4293971 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| AOY87_RS21125 (4293971) | 4293971..4294435 | + | 465 | WP_021568807.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| AOY87_RS21130 (4294490) | 4294490..4295299 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| AOY87_RS21135 (4295548) | 4295548..4296828 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| AOY87_RS21140 (4296851) | 4296851..4297324 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| AOY87_RS21145 (4297335) | 4297335..4298114 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| AOY87_RS21150 (4298104) | 4298104..4298982 | + | 879 | WP_240765684.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| AOY87_RS21155 (4299000) | 4299000..4299434 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.01 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.01 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.01 |