NZ_CP0239781..213341

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 213341 bp
Accession: NZ_CP023978        Location: 1..213341         Organism: Klebsiella variicola strain X39       Replicon: plasmid pX39-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BC497_RS28200 () 228..1232 + 1005 WP_087653722.1 LysR family transcriptional regulator -
BC497_RS28205 () 1367..2047 + 681 Protein_2 MBL fold metallo-hydrolase -
BC497_RS28215 () 3284..3748 - 465 Protein_4 IS91 family transposase IS1294 Transposase
BC497_RS28220 () 3800..4720 - 921 WP_004181990.1 putative cyclic di-GMP phosphodiesterase VF
BC497_RS28225 () 4683..8063 - 3381 WP_032435659.1 Aerobic respiration control sensor protein ArcB VF
BC497_RS28230 () 8368..9558 + 1191 WP_004197507.1 urea ABC transporter substrate-binding protein -
BC497_RS28235 () 9615..10541 + 927 WP_004181993.1 urea ABC transporter permease subunit UrtB -
BC497_RS28240 () 10551..11666 + 1116 WP_004181994.1 urea ABC transporter permease subunit UrtC -
BC497_RS28245 () 11663..12412 + 750 WP_004181995.1 urea ABC transporter ATP-binding protein UrtD -
BC497_RS28250 () 12423..13112 + 690 WP_004181996.1 urea ABC transporter ATP-binding subunit UrtE -
BC497_RS28255 () 13148..14155 + 1008 WP_004181997.1 formamidase -
BC497_RS28260 () 14363..15060 - 698 Protein_13 IS1 family transposase IS1X3 Transposase
BC497_RS28265 () 15245..15361 - 117 Protein_14 transposase domain-containing protein -
BC497_RS32015 () 15306..15569 - 264 WP_004118209.1 transposase -
BC497_RS32020 () 15584..15847 + 264 WP_004118208.1 hypothetical protein -
BC497_RS28275 () 16091..16372 + 282 WP_004152118.1 helix-turn-helix domain-containing protein -
BC497_RS28280 () 16407..16976 + 570 WP_004152117.1 Spore protein SP21 VF
BC497_RS28285 () 17082..19877 + 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
BC497_RS28290 () 19877..20074 + 198 WP_004152115.1 hypothetical protein -
BC497_RS28300 () 20312..21061 + 750 WP_087653615.1 phosphate-starvation-inducible PsiE family protein -
BC497_RS28305 () 21048..22010 + 963 WP_004152113.1 M48 family metalloprotease -
BC497_RS28310 () 22151..23352 + 1202 Protein_23 IS3 family transposase ISKpn38 Transposase
BC497_RS28315 () 23511..23993 - 483 WP_016240380.1 GNAT family N-acetyltransferase Toxin Detail
BC497_RS28320 () 23981..24247 - 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
BC497_RS28325 () 24517..25059 + 543 WP_117339710.1 hypothetical protein -
BC497_RS28330 () 25053..25109 - 57 WP_003032489.1 hypothetical protein -
BC497_RS28335 () 25227..25937 + 711 WP_087653800.1 Flagellar brake protein YcgR VF
BC497_RS28340 () 26055..26639 + 585 WP_047693620.1 hypothetical protein VF
BC497_RS28345 () 26751..27776 + 1026 WP_117339712.1 IS110 family transposase ISAve1 Transposase
BC497_RS28350 () 28071..29015 + 945 WP_162893600.1 IS5 family transposase IS903B Transposase
BC497_RS28360 () 29093..29497 + 405 WP_087653732.1 IS66 family transposase ISEc22 Transposase
BC497_RS28365 () 29494..29841 + 348 WP_038992655.1 IS66 family transposase ISKpn24 Transposase
BC497_RS28370 () 29890..31428 + 1539 WP_110184547.1 IS66 family transposase ISKpn24 Transposase
BC497_RS28375 () 31466..31765 + 300 Protein_35 IS110 family transposase -
BC497_RS28380 () 32101..32940 - 840 WP_087653733.1 SDR family NAD(P)-dependent oxidoreductase -
BC497_RS28385 () 32937..34139 - 1203 WP_038992126.1 MFS transporter -
BC497_RS28390 () 34344..35480 - 1137 WP_038992127.1 metallophosphoesterase -
BC497_RS28395 () 35633..36571 + 939 WP_038992157.1 HTH-type transcriptional regulator PgrR VF
BC497_RS28405 () 36802..37794 - 993 WP_001145103.1 hypothetical protein -
BC497_RS32025 () 37843..37998 - 156 WP_000075580.1 hypothetical protein -
BC497_RS28410 () 38139..38843 + 705 WP_033545665.1 IS6 family transposase IS26 Transposase
BC497_RS28415 () 39002..41305 - 2304 Protein_43 putative signaling protein VF
BC497_RS28425 () 41452..42432 - 981 WP_032084477.1 IS5 family transposase ISKpn26 Transposase
BC497_RS32030 () 42424..42660 + 237 WP_162893601.1 hypothetical protein -
BC497_RS28430 () 42800..43441 - 642 WP_032440552.1 hypothetical protein -
BC497_RS28435 () 43678..44007 + 330 WP_112070734.1 type II toxin-antitoxin system RelE/ParE family toxin -
BC497_RS28440 () 43988..44269 + 282 WP_000780222.1 helix-turn-helix transcriptional regulator -
BC497_RS28445 () 44416..45681 - 1266 WP_112070735.1 translesion error-prone DNA polymerase V subunit UmuC -
BC497_RS28450 () 45681..46106 - 426 WP_045325066.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
BC497_RS28455 () 46184..47670 - 1487 Protein_51 Group II intron-encoded protein LtrA VF
BC497_RS28465 () 48077..48508 + 432 WP_087653728.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
BC497_RS28470 () 48508..49779 + 1272 WP_023332915.1 Y-family DNA polymerase -
BC497_RS28475 () 49861..50835 - 975 WP_021312406.1 ParB/RepB/Spo0J family partition protein -
BC497_RS28480 () 50835..52040 - 1206 WP_009484138.1 AAA family ATPase -
BC497_RS28485 () 52434..52649 + 216 Protein_56 hypothetical protein -
BC497_RS28490 () 52710..52985 + 276 Protein_57 hypothetical protein -
BC497_RS28495 () 53083..53910 - 828 Protein_58 replication initiation protein -
BC497_RS28500 () 54368..54616 + 249 WP_087653731.1 hypothetical protein -
BC497_RS28510 () 54885..55582 + 698 Protein_60 IS1 family transposase IS1X2 Transposase
BC497_RS28515 () 55599..56792 + 1194 Protein_61 iron-sulfur cluster-binding protein -
BC497_RS28520 () 56785..57480 + 696 WP_000370412.1 lactate utilization protein C -
BC497_RS28525 () 57530..57910 - 381 Protein_63 gluconate permease -
BC497_RS28530 () 58121..58432 + 312 WP_000558568.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
BC497_RS28535 () 58429..58848 + 420 WP_000990392.1 helix-turn-helix domain-containing protein Antitoxin Detail
BC497_RS28540 () 58885..60087 - 1203 WP_087653634.1 phage tail protein -
BC497_RS28545 () 60080..60409 - 330 WP_000121260.1 hypothetical protein -
BC497_RS28550 () 60406..61065 - 660 WP_000078540.1 hypothetical protein -
BC497_RS28560 () 61489..62082 - 594 WP_087653635.1 hypothetical protein -
BC497_RS28565 () 62398..62751 + 354 WP_001114073.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
BC497_RS28570 () 62799..63161 + 363 WP_000783215.1 arsenite efflux transporter metallochaperone ArsD -
BC497_RS28575 () 63179..64930 + 1752 WP_001556710.1 arsenite efflux transporter ATPase subunit ArsA -
BC497_RS28580 () 64979..66268 + 1290 WP_000922630.1 arsenite efflux transporter membrane subunit ArsB -
BC497_RS28585 () 66281..66706 + 426 WP_000065758.1 glutaredoxin-dependent arsenate reductase -
BC497_RS28590 () 66737..67010 - 274 Protein_75 hypothetical protein -
BC497_RS28595 () 67155..68177 + 1023 WP_087653636.1 IS21 family transposase ISSen3 Transposase
BC497_RS28600 () 68174..68956 + 783 WP_087653637.1 IS21 family transposase ISSen3 Transposase
BC497_RS28605 () 69023..69250 + 228 Protein_78 hypothetical protein -
BC497_RS28610 () 69471..70451 + 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
BC497_RS28615 () 70601..71695 + 1095 Protein_80 restriction endonuclease -
BC497_RS28620 () 71698..74274 + 2577 WP_087653641.1 EstP -
BC497_RS28630 () 74527..74757 + 231 WP_001261275.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
BC497_RS28635 () 74754..75170 + 417 WP_000754567.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
BC497_RS28645 () 75265..76493 + 1229 WP_117339719.1 IS3 family transposase IS2 Transposase
BC497_RS28650 () 76739..77258 - 520 Protein_85 hypothetical protein Relaxase
BC497_RS28655 () 77272..78060 - 789 WP_087653640.1 hypothetical protein -
BC497_RS28660 () 78060..78525 - 466 Protein_87 hypothetical protein -
BC497_RS32250 () 79118..79849 + 732 WP_174222428.1 hypothetical protein -
BC497_RS28675 () 80042..80566 + 525 Protein_89 hypothetical protein -
BC497_RS28685 () 80764..81459 + 696 Protein_90 IS1 family transposase IS1A Transposase
BC497_RS28690 () 81483..82286 - 804 WP_087653638.1 tetratricopeptide repeat protein -
BC497_RS28695 () 82345..83690 - 1346 Protein_92 ISNCY family transposase ISLad2 Transposase
BC497_RS28700 () 83811..85343 + 1533 WP_087771661.1 IS3 family transposase ISKpn38 Transposase
BC497_RS28705 () 85508..85977 - 470 Protein_94 IS3 family transposase -
BC497_RS28710 () 85979..86452 + 474 Protein_95 hypothetical protein -
BC497_RS28715 () 86581..86796 + 216 WP_014342165.1 restriction endonuclease subunit M -
BC497_RS28720 () 86857..89973 - 3117 WP_117339721.1 HsdR family type I site-specific deoxyribonuclease -
BC497_RS28725 () 90090..91340 - 1251 WP_117339723.1 restriction endonuclease subunit S -
BC497_RS28730 () 91337..92893 - 1557 WP_032437417.1 type I restriction-modification system subunit M -
BC497_RS28735 () 93097..94962 - 1866 WP_032437418.1 DUF262 domain-containing protein -
BC497_RS28745 () 95737..96006 - 270 WP_125275987.1 hypothetical protein -
BC497_RS28750 () 96051..96245 - 195 Protein_102 transposase -
BC497_RS28755 () 97320..97520 + 201 Protein_103 hypothetical protein -
BC497_RS28760 () 97554..98522 + 969 WP_077255787.1 IS5 family transposase IS903B Transposase
BC497_RS28770 () 98891..99871 - 981 WP_032084477.1 IS5 family transposase ISKpn26 Transposase
BC497_RS28775 () 100132..100536 - 405 WP_029884667.1 DUF2251 domain-containing protein -
BC497_RS28780 () 100595..100873 - 279 WP_004210285.1 DUF1778 domain-containing protein -
BC497_RS28785 () 100967..101179 - 213 WP_004210286.1 hypothetical protein -
BC497_RS28800 () 102157..102471 + 315 WP_004118069.1 hypothetical protein -
BC497_RS28805 () 102715..103197 - 483 WP_004210306.1 hypothetical protein -
BC497_RS28810 () 103291..104271 + 981 WP_117339725.1 IS5 family transposase ISKpn26 Transposase
BC497_RS28820 () 104870..105805 - 936 WP_004026564.1 Coagulase/fibrinolysin VF
BC497_RS28840 () 108698..109597 - 900 WP_004026560.1 RepB family plasmid replication initiator protein -
BC497_RS28845 () 109918..110979 - 1062 WP_087653719.1 hypothetical protein -
BC497_RS28850 () 111066..111320 - 255 WP_004117854.1 hypothetical protein -
BC497_RS28855 () 111498..112634 + 1137 WP_012540205.1 tyrosine-type recombinase/integrase -
BC497_RS28860 () 112700..113017 - 318 WP_012540152.1 hypothetical protein -
BC497_RS28865 () 113233..113556 - 324 WP_012540070.1 hypothetical protein -
BC497_RS28870 () 113553..114311 - 759 WP_087653718.1 hypothetical protein -
BC497_RS28875 () 114308..115267 - 960 WP_014386528.1 hypothetical protein -
BC497_RS28880 () 115310..115717 - 408 WP_004186937.1 hypothetical protein -
BC497_RS28885 () 115727..116170 - 444 WP_020477096.1 hypothetical protein -
BC497_RS28890 () 116191..117266 - 1076 Protein_123 IS3 family transposase ISEc27 Transposase
BC497_RS28895 () 117434..118402 + 969 WP_004213807.1 IS110 family transposase ISSm3 Transposase
BC497_RS28900 () 118421..118630 - 210 Protein_125 IS3 family transposase IS2 Transposase
BC497_RS28905 () 118648..119345 + 698 Protein_126 IS1 family transposase IS1R Transposase
BC497_RS28910 () 119766..120503 + 738 WP_025999344.1 hypothetical protein -
BC497_RS28915 () 120583..121065 + 483 WP_023288353.1 hypothetical protein -
BC497_RS28920 () 121147..122259 + 1113 WP_072096726.1 tellurite resistance domain protein -
BC497_RS28925 () 122309..123757 + 1449 WP_023288354.1 hypothetical protein -
BC497_RS28930 () 123775..126832 + 3058 Protein_131 virulence factor SrfB -
BC497_RS28935 () 126832..129546 + 2715 WP_087653625.1 putative virulence factor -
BC497_RS28940 () 129540..130559 + 1020 WP_017901258.1 hypothetical protein -
BC497_RS28945 () 130556..132523 + 1968 WP_087653624.1 hypothetical protein VF
BC497_RS28950 () 132523..133248 + 726 WP_087653623.1 putative ABC transporter ATP-binding protein YknY VF
BC497_RS28955 () 133277..134452 + 1176 WP_162893608.1 hypothetical protein VF
BC497_RS28960 () 134503..134898 + 396 Protein_137 hypothetical protein VF
BC497_RS28965 () 134969..135949 + 981 WP_032084477.1 IS5 family transposase ISKpn26 Transposase
BC497_RS28975 () 136201..136704 + 504 WP_017901263.1 hypothetical protein -
BC497_RS28980 () 136764..137219 - 456 WP_032747566.1 hypothetical protein -
BC497_RS28985 () 137313..138905 - 1593 WP_087653714.1 IS66 family transposase ISKox1 Transposase
BC497_RS28990 () 138936..139286 - 351 WP_004189161.1 IS66 family transposase ISKox1 Transposase
BC497_RS28995 () 139283..139732 - 450 Protein_143 IS66 family transposase ISKox1 Transposase
BC497_RS32255 () 139817..140111 + 295 Protein_144 DUF4113 domain-containing protein -
BC497_RS29005 () 140190..140418 + 229 Protein_145 type II toxin-antitoxin system Phd/YefM family antitoxin -
BC497_RS32260 () 140415..140663 + 249 Protein_146 hypothetical protein -
BC497_RS29015 () 141229..142200 - 972 WP_087653716.1 ParB/RepB/Spo0J family plasmid partition protein -
BC497_RS29020 () 142200..143366 - 1167 WP_023287153.1 Sporulation initiation inhibitor protein Soj VF
BC497_RS29035 () 144096..145106 + 1011 WP_087653717.1 RepB family plasmid replication initiator protein -
BC497_RS29040 () 145928..146553 - 626 Protein_150 tyrosine-type recombinase/integrase -
BC497_RS29045 () 146967..147243 + 277 Protein_151 IS3 family transposase -
BC497_RS29050 () 147381..147917 - 537 WP_032414401.1 hypothetical protein -
BC497_RS29055 () 148128..149228 - 1101 Protein_153 IS3 family transposase ISYps8 Transposase
BC497_RS29070 () 149907..150875 + 969 WP_162893602.1 IS5 family transposase IS903B Transposase
BC497_RS29075 () 150962..151420 - 459 WP_032414405.1 type II toxin-antitoxin system YafO family toxin -
BC497_RS29080 () 151429..151965 - 537 WP_123677973.1 hypothetical protein -
BC497_RS29085 () 152076..152429 - 354 WP_117339737.1 hypothetical protein -
BC497_RS29090 () 152409..153377 + 969 WP_162893603.1 IS5 family transposase IS903B Transposase
BC497_RS32265 () 153437..153586 + 150 Protein_159 DNA polymerase V subunit UmuC -
BC497_RS29095 () 153586..154263 + 678 Protein_160 DUF4113 domain-containing protein -
BC497_RS29100 () 154364..154807 + 444 WP_004181895.1 DUF2384 domain-containing protein Antitoxin Detail
BC497_RS29105 () 154804..155274 + 471 WP_004026354.1 RES family NAD+ phosphorylase Toxin Detail
BC497_RS29110 () 155384..155644 - 261 WP_004026352.1 hypothetical protein -
BC497_RS29115 () 156303..157271 - 969 WP_077255787.1 IS5 family transposase IS903B Transposase
BC497_RS29120 () 157293..158462 - 1170 WP_087653879.1 IS481 family transposase ISKpn28 Transposase
BC497_RS29125 () 158721..159332 - 612 Protein_166 IS3 family transposase ISRaq1 Transposase
BC497_RS29130 () 160633..161730 - 1098 WP_049015454.1 RepB family plasmid replication initiator protein -
BC497_RS29135 () 162177..162874 - 698 Protein_168 IS1 family transposase ISKpn14 Transposase
BC497_RS29140 () 163077..164045 - 969 WP_162893604.1 IS5 family transposase IS903B Transposase
BC497_RS29145 () 164086..164990 - 905 Protein_170 IS66 family transposase ISSgsp1 Transposase
BC497_RS29150 () 165113..165388 - 276 WP_085163641.1 IS66 family transposase ISCfr14 Transposase
BC497_RS29155 () 165385..165723 - 339 WP_023288266.1 IS66 family transposase ISSgsp1 Transposase
BC497_RS29160 () 165817..166275 + 459 Protein_173 IS3 family transposase ISEc27 Transposase
BC497_RS29165 () 166480..166791 + 312 WP_011251285.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
BC497_RS29170 () 166788..167207 + 420 WP_011251286.1 helix-turn-helix domain-containing protein Antitoxin Detail
BC497_RS29180 () 167354..168322 + 969 WP_162893605.1 IS5 family transposase IS903 Transposase
BC497_RS29185 () 168379..168600 - 222 Protein_177 IS5 family transposase ISPan1 Transposase
BC497_RS29190 () 168628..169325 - 698 Protein_178 IS1 family transposase ISKpn14 Transposase
BC497_RS29195 () 169517..170542 - 1026 WP_001101446.1 IS110 family transposase ISAve1 Transposase
BC497_RS29200 () 170862..172319 + 1458 WP_038992405.1 NAD-dependent succinate-semialdehyde dehydrogenase -
BC497_RS29205 () 172665..174137 + 1473 WP_038992407.1 aldehyde dehydrogenase family protein -
BC497_RS29210 () 174165..174833 + 669 WP_038992408.1 haloacid dehalogenase type II -
BC497_RS29215 () 174861..176138 + 1278 WP_038992409.1 FAD-binding oxidoreductase -
BC497_RS29220 () 176170..177774 + 1605 WP_038992411.1 ABC transporter substrate-binding protein -
BC497_RS29225 () 177796..178746 + 951 WP_038992412.1 ABC transporter permease -
BC497_RS29230 () 178746..179597 + 852 WP_038992413.1 ABC transporter permease -
BC497_RS29235 () 179594..181258 + 1665 WP_038992414.1 Glutathione import ATP-binding protein GsiA VF
BC497_RS29240 () 181280..182611 + 1332 WP_038992416.1 FAD-binding oxidoreductase -
BC497_RS29245 () 182642..183490 + 849 WP_038992418.1 GNAT family N-acetyltransferase -
BC497_RS29250 () 183493..184419 + 927 WP_065954191.1 glyoxylate/hydroxypyruvate reductase A -
BC497_RS29255 () 184421..185545 + 1125 WP_087653612.1 amidohydrolase -
BC497_RS29260 () 185673..186995 + 1323 WP_038992423.1 5-aminovalerate aminotransferase DavT VF
BC497_RS29265 () 187134..187640 + 507 WP_038992426.1 Lrp/AsnC family transcriptional regulator -
BC497_RS29270 () 187784..188047 - 264 WP_038992428.1 hypothetical protein -
BC497_RS29275 () 188149..189117 - 969 WP_162893606.1 IS5 family transposase IS903B Transposase
BC497_RS29280 () 189412..190437 - 1026 WP_117339745.1 IS110 family transposase ISAve1 Transposase
BC497_RS29285 () 190564..191919 + 1356 WP_004187017.1 ISNCY family transposase ISCARN112 Transposase
BC497_RS29290 () 191935..192219 - 285 WP_004187019.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
BC497_RS29295 () 192209..192457 - 249 WP_004187025.1 plasmid stabilization protein Antitoxin Detail
BC497_RS29300 () 192747..193055 - 309 Protein_200 IS3 family transposase ISLad1 Transposase
BC497_RS29305 () 193071..194153 - 1083 WP_020803817.1 IS110 family transposase ISEc21 Transposase
BC497_RS29315 () 194433..194969 - 537 Protein_202 IS3 family transposase ISEhe3 Transposase
BC497_RS29320 () 194992..195366 + 375 Protein_203 IS21 family transposase ISEc62 Transposase
BC497_RS29330 () 195575..195715 + 141 Protein_204 IS3 family transposase ISEc14 Transposase
BC497_RS29335 () 195789..195917 - 129 Protein_205 IS110 family transposase -
BC497_RS29340 () 196332..196940 + 609 WP_117339747.1 hypothetical protein VF
BC497_RS29345 () 197134..197835 + 702 WP_000820820.1 putative fimbrial chaperone YadV VF
BC497_RS29350 () 197847..200333 + 2487 WP_117339749.1 Outer membrane usher protein HtrE VF
BC497_RS29355 () 200324..201298 + 975 WP_087653710.1 Fimbria adhesin protein VF
BC497_RS29360 () 201313..201963 + 651 WP_001283944.1 hypothetical protein VF
BC497_RS29365 () 202025..202741 - 717 WP_087653709.1 Cyclic di-GMP phosphodiesterase PdeH VF
BC497_RS29370 () 202922..203890 - 969 WP_162893607.1 IS5 family transposase IS903B Transposase
BC497_RS29375 () 204185..205210 - 1026 WP_001101446.1 IS110 family transposase ISAve1 Transposase
BC497_RS29380 () 205477..207021 - 1545 WP_038992474.1 fumarate hydratase -
BC497_RS29385 () 207049..208503 - 1455 WP_038992476.1 aldehyde dehydrogenase family protein -
BC497_RS29390 () 208518..209618 - 1101 WP_038992478.1 NAD(P)-dependent alcohol dehydrogenase -
BC497_RS29395 () 209635..210378 - 744 WP_038992479.1 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 VF
BC497_RS29400 () 210388..211848 - 1461 WP_087653721.1 aldehyde dehydrogenase family protein -
BC497_RS29405 () 211817..212158 - 342 WP_077255440.1 DUF4387 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance