MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 55761 bp
Accession: NZ_CP019790 Location: 1..55761 Organism: Bartonella schoenbuchensis R1 Replicon: plasmid pVbh_BscR1
Accession: NZ_CP019790 Location: 1..55761 Organism: Bartonella schoenbuchensis R1 Replicon: plasmid pVbh_BscR1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BscR1v2_RS07510 (BscR1v2_016110) | 140..358 | + | 219 | WP_078690350.1 | conjugal transfer protein TraC | - |
| BscR1v2_RS07515 (BscR1v2_016120) | 423..644 | + | 222 | WP_078690351.1 | conjugal transfer protein TraD | - |
| BscR1v2_RS07520 (BscR1v2_016130) | 625..2538 | + | 1914 | WP_078690352.1 | hypothetical protein | VF |
| BscR1v2_RS07525 (BscR1v2_016140) | 2777..3043 | + | 267 | WP_078690390.1 | hypothetical protein | - |
| BscR1v2_RS07530 (BscR1v2_016150) | 3561..3953 | - | 393 | WP_010703113.1 | hypothetical protein | - |
| BscR1v2_RS07535 (BscR1v2_016160) | 4154..4822 | - | 669 | WP_010703114.1 | phage related protein | - |
| BscR1v2_RS07540 (BscR1v2_016170) | 5720..6403 | + | 684 | WP_078690353.1 | hypothetical protein | VF |
| BscR1v2_RS07545 (BscR1v2_016180) | 6400..6768 | + | 369 | WP_078664118.1 | hypothetical protein | - |
| BscR1v2_RS07550 (BscR1v2_016190) | 6769..7092 | - | 324 | WP_078690354.1 | helix-turn-helix domain-containing protein | - |
| BscR1v2_RS07555 (BscR1v2_016200) | 7917..8168 | + | 252 | WP_078690355.1 | DNA-binding protein | - |
| BscR1v2_RS07560 (BscR1v2_016210) | 8165..8563 | + | 399 | WP_078690356.1 | type II toxin-antitoxin system VapC family toxin | - |
| BscR1v2_RS07565 (BscR1v2_016220) | 8572..9228 | - | 657 | WP_078690357.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| BscR1v2_RS07570 (BscR1v2_016240) | 9610..9945 | - | 336 | WP_078690391.1 | hypothetical protein | - |
| BscR1v2_RS07575 (BscR1v2_016250) | 10160..10465 | - | 306 | WP_078690358.1 | hypothetical protein | - |
| BscR1v2_RS07580 (BscR1v2_016260) | 10642..10911 | - | 270 | WP_010703142.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| BscR1v2_RS07585 (BscR1v2_016270) | 10914..11186 | - | 273 | WP_010703143.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BscR1v2_RS07590 (BscR1v2_016280) | 11434..11943 | - | 510 | WP_078690359.1 | hypothetical protein | - |
| BscR1v2_RS07600 (BscR1v2_016290) | 12825..13145 | + | 321 | WP_034989847.1 | helix-turn-helix domain-containing protein | - |
| BscR1v2_RS08140 (BscR1v2_016300) | 13261..13782 | - | 522 | WP_194284960.1 | hypothetical protein | - |
| BscR1v2_RS07610 (BscR1v2_016310) | 13811..14116 | - | 306 | WP_010703167.1 | hypothetical protein | - |
| BscR1v2_RS07615 (BscR1v2_016320) | 14246..15517 | - | 1272 | WP_078690361.1 | replication protein C | - |
| BscR1v2_RS07620 (BscR1v2_016330) | 15997..16296 | + | 300 | WP_010703138.1 | hypothetical protein | - |
| BscR1v2_RS07625 (BscR1v2_016340) | 16293..16565 | + | 273 | WP_078690362.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| BscR1v2_RS07630 (BscR1v2_016360) | 16959..17425 | - | 467 | Protein_23 | hypothetical protein | - |
| BscR1v2_RS07635 (BscR1v2_016370) | 17507..17812 | - | 306 | WP_010703141.1 | hypothetical protein | - |
| BscR1v2_RS07640 (BscR1v2_016380) | 17990..18259 | - | 270 | WP_010703142.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| BscR1v2_RS07645 (BscR1v2_016390) | 18262..18534 | - | 273 | WP_010703143.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BscR1v2_RS07650 (BscR1v2_016400) | 18782..19291 | - | 510 | WP_078690359.1 | hypothetical protein | - |
| BscR1v2_RS07660 (BscR1v2_016410) | 20173..20493 | + | 321 | WP_034989847.1 | helix-turn-helix domain-containing protein | - |
| BscR1v2_RS08145 (BscR1v2_016420) | 20609..21133 | - | 525 | WP_010703147.1 | hypothetical protein | - |
| BscR1v2_RS07670 (BscR1v2_016430) | 21159..21464 | - | 306 | WP_010703148.1 | hypothetical protein | - |
| BscR1v2_RS07675 | 21657..21878 | - | 222 | Protein_31 | hypothetical protein | - |
| BscR1v2_RS07680 | 21875..22183 | - | 309 | WP_034989869.1 | HigA family addiction module antidote protein | - |
| BscR1v2_RS07690 | 22262..22420 | - | 159 | Protein_33 | type II toxin-antitoxin system HicB family antitoxin | - |
| BscR1v2_RS07695 (BscR1v2_016460) | 22417..22701 | - | 285 | WP_010703150.1 | putative addiction module antidote protein | Antitoxin Detail |
| BscR1v2_RS07700 (BscR1v2_016470) | 22682..22990 | - | 309 | WP_034989871.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BscR1v2_RS07705 (BscR1v2_016480) | 23183..23383 | + | 201 | WP_010703152.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BscR1v2_RS07710 (BscR1v2_016490) | 23380..23775 | + | 396 | WP_078690364.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BscR1v2_RS07720 (BscR1v2_016500) | 24169..24441 | - | 273 | WP_078690365.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| BscR1v2_RS08150 (BscR1v2_016510) | 24521..24691 | - | 171 | WP_194284961.1 | hypothetical protein | - |
| BscR1v2_RS08100 (BscR1v2_016520) | 24898..25053 | - | 156 | WP_010703154.1 | hypothetical protein | - |
| BscR1v2_RS08105 (BscR1v2_016530) | 25053..25271 | + | 219 | WP_141638309.1 | hypothetical protein | - |
| BscR1v2_RS07725 (BscR1v2_016540) | 25316..25744 | - | 429 | WP_010703155.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| BscR1v2_RS07730 (BscR1v2_016550) | 25808..25999 | - | 192 | WP_010703156.1 | hypothetical protein | - |
| BscR1v2_RS07735 (BscR1v2_016560) | 26141..26434 | - | 294 | WP_010703157.1 | HigA family addiction module antidote protein | - |
| BscR1v2_RS07740 (BscR1v2_016570) | 26451..26732 | - | 282 | WP_078690366.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BscR1v2_RS07745 (BscR1v2_016580) | 27005..27316 | - | 312 | WP_010703159.1 | transcriptional regulator | - |
| BscR1v2_RS07750 | 27329..27652 | - | 324 | Protein_47 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BscR1v2_RS07755 | 27960..28348 | + | 389 | Protein_48 | single-stranded DNA-binding protein | - |
| BscR1v2_RS07760 (BscR1v2_016600) | 28419..28946 | + | 528 | WP_078690367.1 | hypothetical protein | - |
| BscR1v2_RS07765 (BscR1v2_016610) | 29019..29276 | + | 258 | WP_010703162.1 | PemI protein | Antitoxin Detail |
| BscR1v2_RS07770 (BscR1v2_016620) | 29276..29608 | + | 333 | WP_078690368.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BscR1v2_RS07775 (BscR1v2_016630) | 29669..29899 | - | 231 | WP_078690392.1 | hypothetical protein | - |
| BscR1v2_RS07780 (BscR1v2_016640) | 29911..30156 | + | 246 | WP_078690369.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| BscR1v2_RS07785 | 30267..30602 | - | 336 | WP_078690393.1 | hypothetical protein | - |
| BscR1v2_RS07790 (BscR1v2_016660) | 30817..31122 | - | 306 | WP_078690370.1 | hypothetical protein | - |
| BscR1v2_RS07795 (BscR1v2_016670) | 31251..32510 | - | 1260 | WP_078690371.1 | hypothetical protein | - |
| BscR1v2_RS07800 (BscR1v2_016680) | 32978..33259 | + | 282 | WP_078690372.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BscR1v2_RS07805 (BscR1v2_016690) | 33277..33576 | + | 300 | WP_078690373.1 | HigA family addiction module antidote protein | - |
| BscR1v2_RS07810 | 33671..33873 | - | 203 | Protein_59 | tyrosine-type recombinase/integrase | - |
| BscR1v2_RS07815 (BscR1v2_016700) | 33921..34226 | - | 306 | WP_010703129.1 | hypothetical protein | - |
| BscR1v2_RS07820 | 34777..34998 | + | 222 | WP_034989862.1 | antitoxin MazE family protein | Antitoxin Detail |
| BscR1v2_RS07825 (BscR1v2_016720) | 34998..35324 | + | 327 | WP_194284962.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BscR1v2_RS07830 (BscR1v2_016730) | 35596..35901 | - | 306 | WP_078690375.1 | hypothetical protein | - |
| BscR1v2_RS07835 (BscR1v2_016740) | 36030..37301 | - | 1272 | WP_078690361.1 | replication protein C | - |
| BscR1v2_RS07840 (BscR1v2_016750) | 37686..38297 | + | 612 | WP_078690376.1 | hypothetical protein | - |
| BscR1v2_RS07845 (BscR1v2_016760) | 38873..39592 | - | 720 | WP_078690394.1 | nuclease | - |
| BscR1v2_RS07850 (BscR1v2_016770) | 39695..40009 | + | 315 | WP_010703089.1 | hypothetical protein | VF |
| BscR1v2_RS07855 (BscR1v2_016780) | 40026..40352 | + | 327 | WP_034989850.1 | Type IV secretion system protein virB3 | VF |
| BscR1v2_RS07860 (BscR1v2_016790) | 40349..42709 | + | 2361 | WP_078690377.1 | Type IV secretion system protein virB4 | VF |
| BscR1v2_RS07865 (BscR1v2_016800) | 42706..43413 | + | 708 | WP_078690378.1 | type IV secretion system protein | - |
| BscR1v2_RS07870 (BscR1v2_016810) | 43448..43825 | + | 378 | WP_078690379.1 | EexN family lipoprotein | - |
| BscR1v2_RS07875 (BscR1v2_016820) | 43877..44134 | + | 258 | WP_078690380.1 | EexN family lipoprotein | - |
| BscR1v2_RS07880 (BscR1v2_016830) | 44154..44522 | + | 369 | WP_078690381.1 | EexN family lipoprotein | - |
| BscR1v2_RS07885 (BscR1v2_016840) | 44573..45487 | + | 915 | WP_078690382.1 | Type IV secretion system protein VirB6 | VF |
| BscR1v2_RS07890 (BscR1v2_016850) | 45504..45791 | + | 288 | WP_078690383.1 | hypothetical protein | VF |
| BscR1v2_RS07895 (BscR1v2_016860) | 45797..46468 | + | 672 | WP_078690384.1 | Type IV secretion system protein virB8 | VF |
| BscR1v2_RS07900 (BscR1v2_016870) | 46471..47325 | + | 855 | WP_078690385.1 | Type IV secretion system protein virB9 | VF |
| BscR1v2_RS07905 (BscR1v2_016880) | 47240..48481 | + | 1242 | WP_078690386.1 | Type IV secretion system protein virB10 | VF |
| BscR1v2_RS07910 (BscR1v2_016890) | 48494..49546 | + | 1053 | WP_010703103.1 | Type IV secretion system protein VirB11 | VF |
| BscR1v2_RS07915 (BscR1v2_016900) | 49569..49883 | - | 315 | WP_010703104.1 | helix-turn-helix domain-containing protein | - |
| BscR1v2_RS07920 (BscR1v2_016910) | 49883..50224 | - | 342 | WP_078690387.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BscR1v2_RS07925 (BscR1v2_016920) | 50278..51714 | - | 1437 | WP_153302026.1 | Fic family protein | Toxin Detail |
| BscR1v2_RS07930 (BscR1v2_016930) | 51701..51889 | - | 189 | WP_078690388.1 | antitoxin VbhA family protein | Antitoxin Detail |
| BscR1v2_RS07935 (BscR1v2_016940) | 51972..55691 | - | 3720 | WP_078690389.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|