MGE detailed information
MGE type: Prophage MGE length: 40359 bp
Accession: NZ_CP014348 Location: 3669648..3710006 Organism: Escherichia coli str. K-12 substr. MG1655 strain JW5437-1 Replicon: chromosome
Accession: NZ_CP014348 Location: 3669648..3710006 Organism: Escherichia coli str. K-12 substr. MG1655 strain JW5437-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWN69_RS18065 () | 3665547..3666767 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| AWN69_RS18070 () | 3666892..3667587 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| AWN69_RS18075 () | 3667540..3668832 | - | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| AWN69_RS18080 () | 3668991..3669605 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| AWN69_RS18085 () | 3669648..3670502 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| AWN69_RS18090 () | 3670504..3671121 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| AWN69_RS18095 () | 3671132..3673555 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| AWN69_RS18100 () | 3673616..3676042 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| AWN69_RS18105 () | 3676241..3676546 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| AWN69_RS18110 () | 3676654..3677364 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| AWN69_RS18115 () | 3677367..3677927 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AWN69_RS18120 () | 3677962..3678303 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| AWN69_RS18125 () | 3678438..3678764 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| AWN69_RS18130 () | 3678970..3680184 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AWN69_RS18135 () | 3680196..3681215 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| AWN69_RS25370 () | 3681273..3681383 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| AWN69_RS25870 () | 3681403..3682560 | - | 1158 | Protein_3452 | Putative defective protein IntQ ; Integrase | Integrase |
| AWN69_RS18145 () | 3682574..3683269 | - | 696 | Protein_3453 | IS3 family transposase IS2 | Transposase |
| AWN69_RS24575 () | 3683266..3684033 | - | 768 | Protein_3454 | exonuclease | - |
| AWN69_RS18155 () | 3684126..3684317 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| AWN69_RS18160 () | 3684314..3684502 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AWN69_RS18170 () | 3685070..3685288 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| AWN69_RS18175 () | 3685448..3685603 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AWN69_RS18180 () | 3685770..3686177 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| AWN69_RS18185 () | 3686261..3686491 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| AWN69_RS18190 () | 3686475..3686753 | + | 279 | Protein_3461 | hypothetical protein | - |
| AWN69_RS18195 () | 3686788..3686937 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| AWN69_RS18200 () | 3687374..3687706 | - | 333 | WP_001301033.1 | protein FlxA | - |
| AWN69_RS24590 () | 3687909..3688214 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| AWN69_RS18205 () | 3688239..3688478 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AWN69_RS18210 () | 3688478..3688765 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AWN69_RS18215 () | 3688837..3688992 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AWN69_RS18220 () | 3689209..3689460 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| AWN69_RS18225 () | 3689527..3689805 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| AWN69_RS18230 () | 3689807..3690856 | + | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| AWN69_RS18235 () | 3690870..3691622 | + | 753 | WP_001047135.1 | antitermination protein | - |
| AWN69_RS25880 () | 3691900..3691989 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| AWN69_RS18240 () | 3692044..3692256 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AWN69_RS18245 () | 3692557..3692772 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AWN69_RS26280 () | 3693136..3693306 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| AWN69_RS18250 () | 3693526..3693741 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AWN69_RS18255 () | 3693746..3694057 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| AWN69_RS18260 () | 3694054..3694587 | + | 534 | WP_001092971.1 | lysozyme | - |
| AWN69_RS18265 () | 3694584..3695081 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AWN69_RS18270 () | 3695444..3695656 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AWN69_RS24595 () | 3695667..3695855 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| AWN69_RS25885 () | 3695858..3695923 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| AWN69_RS18275 () | 3696002..3696157 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| AWN69_RS18280 () | 3696329..3696502 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AWN69_RS18285 () | 3696654..3697064 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AWN69_RS18290 () | 3697122..3697355 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AWN69_RS18295 () | 3697744..3698313 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| AWN69_RS18300 () | 3698264..3699226 | + | 963 | WP_001027733.1 | phage tail protein | - |
| AWN69_RS18305 () | 3699226..3699801 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| AWN69_RS18310 () | 3699899..3700489 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AWN69_RS18315 () | 3700806..3701039 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AWN69_RS25890 () | 3701108..3701221 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| AWN69_RS18320 () | 3701742..3703109 | + | 1368 | Protein_3493 | MHS family MFS transporter | - |
| AWN69_RS18325 () | 3703198..3704658 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| AWN69_RS18330 () | 3704693..3704896 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AWN69_RS18335 () | 3705073..3705759 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| AWN69_RS18340 () | 3705848..3706594 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| AWN69_RS18345 () | 3706731..3708776 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| AWN69_RS18350 () | 3708820..3709338 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| AWN69_RS18355 () | 3709614..3710006 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| AWN69_RS18360 () | 3710261..3711151 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| AWN69_RS26285 () | 3711266..3711370 | - | 105 | WP_211180496.1 | protein MgtT | - |
| AWN69_RS18365 () | 3711370..3711465 | - | 96 | WP_000901367.1 | protein MgtS | - |
| AWN69_RS18370 () | 3711592..3712779 | - | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| AWN69_RS18375 () | 3712974..3713873 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| AWN69_RS18380 () | 3713904..3714122 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| AWN69_RS18385 () | 3714154..3714537 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| AWN69_RS18390 () | 3714557..3714991 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.004 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.005 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.004 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.004 | |
| Escherichia coli C | Prophage | TA75071 | NZ_CP020543 | 2249542..2301270 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.004 |