MGE detailed information
MGE type: Conjugative plasmid MGE length: 121385 bp
Accession: NZ_CP009860 Location: 1..121385 Organism: Escherichia coli strain ECONIH1 Replicon: plasmid pECO-824
Accession: NZ_CP009860 Location: 1..121385 Organism: Escherichia coli strain ECONIH1 Replicon: plasmid pECO-824
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECONIH1_RS30860 () | 638..942 | - | 305 | Protein_1 | hypothetical protein | - |
| ECONIH1_RS26425 () | 946..1848 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| ECONIH1_RS26430 () | 2715..3686 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| ECONIH1_RS26435 () | 3686..4852 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| ECONIH1_RS26440 () | 5440..6195 | - | 756 | WP_024946706.1 | replication initiation protein RepE | - |
| ECONIH1_RS26445 () | 6969..7775 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| ECONIH1_RS26450 () | 7776..8081 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| ECONIH1_RS26455 () | 8083..8301 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| ECONIH1_RS26460 () | 8868..9380 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| ECONIH1_RS26465 () | 9414..10547 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| ECONIH1_RS26470 () | 10714..11487 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| ECONIH1_RS26475 () | 11500..12000 | - | 501 | WP_000528931.1 | hypothetical protein | - |
| ECONIH1_RS26480 () | 12265..12495 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ECONIH1_RS26485 () | 12492..12908 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ECONIH1_RS26490 () | 12953..16747 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| ECONIH1_RS26495 () | 17128..17358 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ECONIH1_RS26500 () | 17355..17771 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ECONIH1_RS26505 () | 17846..19411 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| ECONIH1_RS26510 () | 19396..20418 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| ECONIH1_RS26515 () | 20672..21369 | - | 698 | Protein_20 | IS1 family transposase IS1S | Transposase |
| ECONIH1_RS26520 () | 21725..22639 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| ECONIH1_RS26525 () | 22639..23466 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| ECONIH1_RS26530 () | 23463..24320 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| ECONIH1_RS26535 () | 24317..25174 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| ECONIH1_RS30870 () | 25408..25665 | - | 258 | Protein_25 | Tn3 family transposase | - |
| ECONIH1_RS26540 () | 25663..26076 | + | 414 | Protein_26 | phosphopyruvate hydratase | - |
| ECONIH1_RS26550 () | 26417..26797 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| ECONIH1_RS26555 () | 27177..28370 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| ECONIH1_RS26560 () | 28506..30230 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| ECONIH1_RS26565 () | 30231..31178 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| ECONIH1_RS26570 () | 31178..32920 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| ECONIH1_RS26575 () | 32917..34194 | + | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| ECONIH1_RS26580 () | 34276..36477 | + | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| ECONIH1_RS26585 () | 36857..37554 | + | 698 | Protein_34 | IS1 family transposase IS1S | Transposase |
| ECONIH1_RS26590 () | 37734..38247 | - | 514 | Protein_35 | DUF4113 domain-containing protein | - |
| ECONIH1_RS31485 () | 38308..38412 | - | 105 | Protein_36 | AAA family ATPase | - |
| ECONIH1_RS26595 () | 38414..38737 | - | 324 | Protein_37 | IS21 family transposase IS21 | Transposase |
| ECONIH1_RS26610 () | 39483..40460 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| ECONIH1_RS26615 () | 40745..41485 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| ECONIH1_RS31490 () | 41606..41788 | - | 183 | WP_042344623.1 | hypothetical protein | - |
| ECONIH1_RS30005 () | 42131..42438 | - | 308 | Protein_41 | type II toxin-antitoxin system ParD family antitoxin | - |
| ECONIH1_RS26635 () | 42931..44100 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| ECONIH1_RS31495 () | 44133..44261 | + | 129 | Protein_43 | IS481 family transposase | - |
| ECONIH1_RS26640 () | 44296..44589 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| ECONIH1_RS26645 () | 44695..44970 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECONIH1_RS26650 () | 44970..45254 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| ECONIH1_RS26655 () | 45859..46611 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| ECONIH1_RS26660 () | 46657..47622 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| ECONIH1_RS26665 () | 47655..48035 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| ECONIH1_RS26670 () | 48060..48950 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| ECONIH1_RS26675 () | 49183..49377 | - | 195 | WP_000796505.1 | hypothetical protein | - |
| ECONIH1_RS26680 () | 49351..49791 | + | 441 | Protein_52 | zinc-binding dehydrogenase | - |
| ECONIH1_RS26685 () | 49922..50800 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| ECONIH1_RS26690 () | 50790..51677 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| ECONIH1_RS26695 () | 51688..52512 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| ECONIH1_RS26700 () | 52518..53591 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| ECONIH1_RS26705 () | 53584..54894 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| ECONIH1_RS26710 () | 54953..55261 | - | 309 | Protein_58 | IS4 family transposase ISEc13 | Transposase |
| ECONIH1_RS30015 () | 55338..55571 | - | 234 | Protein_59 | Tn3 family transposase ISPsy39 | Transposase |
| ECONIH1_RS30020 () | 55593..56789 | - | 1197 | Protein_60 | IS3 family transposase | - |
| ECONIH1_RS26735 () | 56814..57518 | + | 705 | WP_001067834.1 | IS3 family transposase IS1203 | Transposase |
| ECONIH1_RS26740 () | 57841..59373 | - | 1533 | WP_013362816.1 | IS91 family transposase ISVsa3 | Transposase |
| ECONIH1_RS31995 () | 59600..59941 | - | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| ECONIH1_RS26750 () | 59902..60351 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| ECONIH1_RS32000 () | 60866..61036 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| ECONIH1_RS26755 () | 60981..61718 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| ECONIH1_RS26760 () | 61844..61939 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| ECONIH1_RS26765 () | 62074..62778 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ECONIH1_RS26770 () | 62900..63805 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| ECONIH1_RS26775 () | 63802..65040 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| ECONIH1_RS26780 () | 65040..65624 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| ECONIH1_RS26790 () | 66117..66881 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| ECONIH1_RS32005 () | 66999..67064 | - | 66 | Protein_73 | EAL domain-containing protein | - |
| ECONIH1_RS26795 () | 67108..67413 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| ECONIH1_RS26800 () | 67424..68629 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| ECONIH1_RS26805 () | 68785..68988 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| ECONIH1_RS26810 () | 69116..69955 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| ECONIH1_RS26815 () | 69949..70296 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| ECONIH1_RS26820 () | 70502..71290 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| ECONIH1_RS26825 () | 71421..71894 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| ECONIH1_RS26830 () | 72052..72732 | + | 681 | Protein_81 | IS91 family transposase ISAzo26 | Transposase |
| ECONIH1_RS26835 () | 72797..73501 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| ECONIH1_RS26840 () | 73567..74112 | + | 546 | Protein_83 | Tn3 family transposase TnpA_Tn3 | Transposase |
| ECONIH1_RS30060 () | 74148..74563 | - | 416 | Protein_84 | IS1 family transposase | - |
| ECONIH1_RS26850 () | 74812..75213 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| ECONIH1_RS31855 () | 75146..75403 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| ECONIH1_RS26860 () | 75496..76149 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| ECONIH1_RS26865 () | 77089..77946 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| ECONIH1_RS26870 () | 77939..78013 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| ECONIH1_RS32080 () | 78010..78144 | - | 135 | Protein_90 | protein CopA/IncA | - |
| ECONIH1_RS30075 () | 78250..78402 | - | 153 | WP_072258247.1 | replication protein A | - |
| ECONIH1_RS26880 () | 78483..79505 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| ECONIH1_RS26885 () | 79502..80284 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| ECONIH1_RS30080 () | 80353..80463 | - | 111 | Protein_94 | replication protein | - |
| ECONIH1_RS26890 () | 80760..80894 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 80939..80999 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 80939..80999 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 80939..80999 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 80939..80999 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| ECONIH1_RS26895 () | 80966..81252 | - | 287 | Protein_96 | DUF2726 domain-containing protein | - |
| ECONIH1_RS26900 () | 81765..81977 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| ECONIH1_RS26905 () | 82108..82668 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| ECONIH1_RS26910 () | 82723..83469 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| ECONIH1_RS26915 () | 83489..88759 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| ECONIH1_RS26920 () | 88759..90948 | - | 2190 | WP_024946705.1 | type IV conjugative transfer system coupling protein TraD | - |
| ECONIH1_RS26925 () | 90945..91724 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| ECONIH1_RS26930 () | 91927..92658 | - | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| ECONIH1_RS26935 () | 92690..93187 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| ECONIH1_RS26940 () | 93206..96025 | - | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ECONIH1_RS26945 () | 96022..97395 | - | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| ECONIH1_RS26950 () | 97382..97807 | - | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| ECONIH1_RS26955 () | 97755..98102 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| ECONIH1_RS26960 () | 98032..98577 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ECONIH1_RS26965 () | 98564..98848 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ECONIH1_RS26970 () | 98965..99662 | - | 698 | Protein_111 | IS1 family transposase IS1G | Transposase |
| ECONIH1_RS30100 () | 99722..99802 | - | 81 | Protein_112 | type IV conjugative transfer system protein TraL | - |
| ECONIH1_RS26975 () | 99807..100169 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| ECONIH1_RS26980 () | 100203..100430 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| ECONIH1_RS26985 () | 100518..101195 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| ECONIH1_RS26990 () | 101329..101712 | - | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| ECONIH1_RS26995 () | 102043..102645 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| ECONIH1_RS27000 () | 102942..103763 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| ECONIH1_RS27005 () | 103882..104169 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| ECONIH1_RS30915 () | 104194..104400 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| ECONIH1_RS32085 () | 104313..104648 | - | 336 | WP_013023876.1 | hypothetical protein | - |
| ECONIH1_RS27020 () | 105091..105249 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 105293..105420 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 105293..105420 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 105293..105420 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 105293..105420 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - () | 106862..106964 | - | 103 | NuclAT_1 | - | - |
| - () | 106862..106964 | - | 103 | NuclAT_1 | - | - |
| - () | 106862..106964 | - | 103 | NuclAT_1 | - | - |
| - () | 106862..106964 | - | 103 | NuclAT_1 | - | - |
| ECONIH1_RS27040 () | 106976..107695 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| ECONIH1_RS27045 () | 107692..108126 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| ECONIH1_RS27050 () | 108181..110139 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| ECONIH1_RS27055 () | 110205..110438 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| ECONIH1_RS27060 () | 110501..111040 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| ECONIH1_RS32090 () | 111185..111520 | - | 336 | WP_013023883.1 | hypothetical protein | - |
| ECONIH1_RS30945 () | 111683..111907 | - | 225 | WP_016238251.1 | hypothetical protein | - |
| ECONIH1_RS27080 () | 111933..112496 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| ECONIH1_RS27085 () | 112544..113905 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| ECONIH1_RS27090 () | 113957..114187 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| ECONIH1_RS27095 () | 115222..115413 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| ECONIH1_RS27100 () | 115410..115832 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| ECONIH1_RS27105 () | 115879..116181 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| ECONIH1_RS31860 () | 116721..117497 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| ECONIH1_RS27115 () | 117548..117982 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| ECONIH1_RS27120 () | 117996..118217 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| ECONIH1_RS27125 () | 118218..118832 | - | 615 | WP_040123392.1 | DNA methylase | - |
| ECONIH1_RS27130 () | 118831..119181 | + | 351 | WP_071884080.1 | WbuC family cupin fold metalloprotein | - |
| ECONIH1_RS27135 () | 119228..120103 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|