MGE detailed information
MGE type: Integron MGE length: 42806 bp
Accession: NZ_AP024552 Location: 730402..773207 Organism: Vibrio cholerae strain IDH-02387 Replicon: chromosome
Accession: NZ_AP024552 Location: 730402..773207 Organism: Vibrio cholerae strain IDH-02387 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J81_RS17540 | 726158..726400 | + | 243 | Protein_683 | transposase | - |
| K6J81_RS17545 | 726533..728143 | + | 1611 | WP_221291564.1 | IS1634-like element ISSpu7 family transposase | - |
| K6J81_RS17550 | 728162..729102 | + | 941 | Protein_685 | IS3-like element ISVch4 family transposase | - |
| K6J81_RS17555 | 729099..729794 | + | 696 | WP_000213836.1 | hypothetical protein | - |
| K6J81_RS17560 | 729855..730361 | - | 507 | WP_001921103.1 | hypothetical protein | - |
| K6J81_RS17565 | 730402..731424 | - | 1023 | WP_000954291.1 | hypothetical protein | - |
| K6J81_RS17570 | 731536..731676 | - | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17575 | 731642..732577 | - | 936 | WP_000051985.1 | restriction endonuclease | - |
| K6J81_RS17580 | 732858..733457 | - | 600 | WP_000429495.1 | DUF6338 family protein | - |
| K6J81_RS17585 | 733612..733878 | - | 267 | WP_000937852.1 | hypothetical protein | - |
| K6J81_RS17590 | 734092..734775 | - | 684 | WP_000877436.1 | hypothetical protein | - |
| K6J81_RS17595 | 735199..735291 | - | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17600 | 735313..735891 | - | 579 | WP_000110120.1 | hypothetical protein | - |
| K6J81_RS17605 | 736120..736362 | + | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| K6J81_RS17610 | 736359..736658 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS17615 | 736786..737181 | - | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| K6J81_RS17620 | 737395..737574 | - | 180 | WP_001883058.1 | DUF645 family protein | - |
| K6J81_RS17625 | 738152..738241 | - | 90 | WP_072606010.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17630 | 738272..738970 | - | 699 | WP_001890502.1 | hypothetical protein | - |
| K6J81_RS17635 | 739093..739719 | - | 627 | WP_000365424.1 | LysE family translocator | - |
| K6J81_RS17640 | 739761..739853 | - | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17645 | 739868..740341 | - | 474 | WP_001161076.1 | GrpB family protein | - |
| K6J81_RS17650 | 740541..740723 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| K6J81_RS19340 | 740784..740921 | - | 138 | WP_001890145.1 | hypothetical protein | - |
| K6J81_RS17655 | 741115..741711 | - | 597 | WP_000255434.1 | hypothetical protein | - |
| K6J81_RS17660 | 741776..742237 | - | 462 | WP_001911578.1 | lipocalin family protein | - |
| K6J81_RS17665 | 742486..742770 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K6J81_RS17670 | 742767..743045 | + | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| K6J81_RS17675 | 743196..743609 | - | 414 | WP_000049420.1 | VOC family protein | - |
| K6J81_RS19345 | 743684..743800 | - | 117 | WP_086010882.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17680 | 743797..744276 | - | 480 | WP_000009888.1 | lecithin retinol acyltransferase family protein | - |
| K6J81_RS17685 | 744489..745112 | - | 624 | WP_000247070.1 | DUF1349 domain-containing protein | - |
| K6J81_RS17690 | 745318..745743 | - | 426 | WP_000415750.1 | hypothetical protein | - |
| K6J81_RS19350 | 745890..746039 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17695 | 746012..746263 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| K6J81_RS17700 | 746458..746661 | - | 204 | WP_001911580.1 | hypothetical protein | - |
| K6J81_RS17705 | 746918..747304 | - | 387 | WP_000703163.1 | VOC family protein | - |
| K6J81_RS17710 | 747461..747967 | - | 507 | WP_000393074.1 | hypothetical protein | - |
| K6J81_RS19355 | 748489..748674 | - | 186 | WP_001999468.1 | hypothetical protein | - |
| K6J81_RS17720 | 748741..749100 | - | 360 | WP_001071541.1 | VOC family protein | - |
| K6J81_RS17725 | 749253..750257 | - | 1005 | WP_000964920.1 | LD-carboxypeptidase | - |
| K6J81_RS17730 | 750473..750655 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| K6J81_RS17735 | 750716..750844 | - | 129 | WP_071908338.1 | general secretion pathway protein GspI | - |
| K6J81_RS19360 | 750834..750950 | - | 117 | WP_086010881.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17740 | 750947..751741 | - | 795 | WP_001911581.1 | hypothetical protein | - |
| K6J81_RS17745 | 751837..752082 | - | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| K6J81_RS17750 | 752069..752335 | - | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| K6J81_RS17755 | 752644..752922 | - | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| K6J81_RS17760 | 753174..753416 | - | 243 | WP_000107461.1 | hypothetical protein | - |
| K6J81_RS19365 | 753508..753657 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17765 | 753630..753881 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| K6J81_RS17770 | 754076..754462 | - | 387 | WP_000703163.1 | VOC family protein | - |
| K6J81_RS17775 | 754452..754553 | - | 102 | WP_001921603.1 | hypothetical protein | - |
| K6J81_RS19370 | 754753..754851 | - | 99 | WP_223225486.1 | DUF3709 domain-containing protein | - |
| K6J81_RS17785 | 755211..755489 | - | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| K6J81_RS19375 | 755607..755724 | - | 118 | Protein_738 | DUF3265 domain-containing protein | - |
| K6J81_RS17790 | 755775..756053 | + | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K6J81_RS17795 | 756046..756315 | + | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| K6J81_RS17800 | 756463..756908 | - | 446 | Protein_741 | hypothetical protein | - |
| K6J81_RS17810 | 757158..757283 | - | 126 | WP_001900195.1 | DUF645 family protein | - |
| K6J81_RS17815 | 757676..757948 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K6J81_RS17820 | 757945..758442 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K6J81_RS19380 | 758459..758527 | - | 69 | Protein_745 | acetyltransferase | - |
| K6J81_RS17825 | 758592..759053 | - | 462 | WP_001903091.1 | lipocalin family protein | - |
| K6J81_RS17830 | 759244..759780 | - | 537 | WP_000469482.1 | GNAT family protein | - |
| K6J81_RS17835 | 760038..760259 | - | 222 | WP_032467793.1 | DUF1289 domain-containing protein | - |
| K6J81_RS17840 | 760268..760381 | - | 114 | WP_001900214.1 | hypothetical protein | - |
| K6J81_RS17845 | 760438..760824 | - | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| K6J81_RS17850 | 761068..761340 | + | 273 | WP_221291565.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J81_RS17855 | 761330..761647 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J81_RS17860 | 761801..762139 | - | 339 | WP_000713853.1 | hypothetical protein | - |
| K6J81_RS17865 | 762297..763001 | - | 705 | WP_000087610.1 | HNH endonuclease | - |
| K6J81_RS17870 | 763163..764371 | - | 1209 | WP_000272282.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| K6J81_RS17875 | 764533..765210 | - | 678 | WP_000254617.1 | HNH endonuclease signature motif containing protein | - |
| K6J81_RS17880 | 765405..765587 | - | 183 | WP_000923153.1 | DUF645 family protein | - |
| K6J81_RS19385 | 765759..765821 | - | 63 | Protein_758 | acetyltransferase | - |
| K6J81_RS17885 | 765941..766123 | - | 183 | WP_000923340.1 | DUF645 family protein | - |
| K6J81_RS17890 | 766419..766796 | - | 378 | WP_000411106.1 | hypothetical protein | - |
| K6J81_RS17895 | 767001..767183 | - | 183 | WP_000923334.1 | DUF645 family protein | - |
| K6J81_RS17900 | 767208..767387 | - | 180 | WP_001203705.1 | hypothetical protein | - |
| K6J81_RS17905 | 767485..768237 | - | 753 | WP_000116045.1 | putative oxidoreductase YgfF | VF |
| K6J81_RS17910 | 768393..769022 | - | 630 | WP_001009012.1 | Chloramphenicol acetyltransferase | VF |
| K6J81_RS19390 | 769025..769108 | - | 84 | WP_080033413.1 | acetyltransferase | - |
| K6J81_RS17915 | 769173..769604 | - | 432 | WP_000795498.1 | hypothetical protein | - |
| K6J81_RS19395 | 769635..769784 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17920 | 769757..770008 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| K6J81_RS17925 | 770264..770446 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| K6J81_RS17930 | 771110..771199 | - | 90 | WP_072615218.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17935 | 771217..771569 | - | 353 | Protein_771 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| K6J81_RS17940 | 771598..771765 | - | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| K6J81_RS17945 | 772245..773207 | + | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| K6J81_RS17950 | 773289..773642 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| K6J81_RS17955 | 773684..773878 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| K6J81_RS17960 | 773982..774533 | - | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| K6J81_RS17965 | 774537..776465 | - | 1929 | WP_001121779.1 | threonine--tRNA ligase | - |
| K6J81_RS17970 | 776734..776961 | - | 228 | WP_001911595.1 | hypothetical protein | - |
| K6J81_RS17975 | 777086..777757 | - | 672 | WP_000132861.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|