MGE detailed information
MGE type: Integron MGE length: 42806 bp
Accession: NZ_AP024550 Location: 787805..830610 Organism: Vibrio cholerae strain IDH-00113 Replicon: chromosome
Accession: NZ_AP024550 Location: 787805..830610 Organism: Vibrio cholerae strain IDH-00113 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J78_RS16925 | 783255..783926 | + | 672 | WP_000132861.1 | hypothetical protein | - |
| K6J78_RS16930 | 784051..784278 | + | 228 | WP_001911595.1 | hypothetical protein | - |
| K6J78_RS16935 | 784547..786475 | + | 1929 | WP_001121779.1 | threonine--tRNA ligase | - |
| K6J78_RS16940 | 786479..787030 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| K6J78_RS16945 | 787134..787328 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| K6J78_RS16950 | 787370..787723 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| K6J78_RS16955 | 787805..788767 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| K6J78_RS16960 | 789247..789414 | + | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| K6J78_RS16965 | 789443..789795 | + | 353 | Protein_675 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| K6J78_RS16970 | 789813..789902 | + | 90 | WP_072615218.1 | DUF3265 domain-containing protein | - |
| K6J78_RS16975 | 790566..790748 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| K6J78_RS16980 | 791004..791255 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| K6J78_RS18670 | 791228..791377 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| K6J78_RS16985 | 791408..791839 | + | 432 | WP_000795498.1 | hypothetical protein | - |
| K6J78_RS18675 | 791904..791987 | + | 84 | WP_080033413.1 | acetyltransferase | - |
| K6J78_RS16990 | 791990..792619 | + | 630 | WP_001009012.1 | Chloramphenicol acetyltransferase | VF |
| K6J78_RS16995 | 792775..793527 | + | 753 | WP_000116045.1 | putative oxidoreductase YgfF | VF |
| K6J78_RS17000 | 793625..793804 | + | 180 | WP_001203705.1 | hypothetical protein | - |
| K6J78_RS17005 | 793829..794011 | + | 183 | WP_000923334.1 | DUF645 family protein | - |
| K6J78_RS17010 | 794216..794593 | + | 378 | WP_000411106.1 | hypothetical protein | - |
| K6J78_RS17015 | 794889..795071 | + | 183 | WP_000923340.1 | DUF645 family protein | - |
| K6J78_RS18680 | 795191..795253 | + | 63 | Protein_688 | acetyltransferase | - |
| K6J78_RS17020 | 795425..795607 | + | 183 | WP_000923153.1 | DUF645 family protein | - |
| K6J78_RS17025 | 795802..796479 | + | 678 | WP_000254617.1 | HNH endonuclease signature motif containing protein | - |
| K6J78_RS17030 | 796641..797849 | + | 1209 | WP_000272282.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| K6J78_RS17035 | 798011..798715 | + | 705 | WP_000087610.1 | HNH endonuclease | - |
| K6J78_RS17040 | 798873..799211 | + | 339 | WP_000713853.1 | hypothetical protein | - |
| K6J78_RS17045 | 799365..799682 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J78_RS17050 | 799701..799943 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J78_RS17055 | 800187..800573 | + | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| K6J78_RS17060 | 800630..800743 | + | 114 | WP_001900214.1 | hypothetical protein | - |
| K6J78_RS17065 | 800752..800973 | + | 222 | WP_032467793.1 | DUF1289 domain-containing protein | - |
| K6J78_RS17070 | 801231..801767 | + | 537 | WP_000469482.1 | GNAT family protein | - |
| K6J78_RS17075 | 801958..802419 | + | 462 | WP_001903091.1 | lipocalin family protein | - |
| K6J78_RS18685 | 802484..802552 | + | 69 | Protein_701 | acetyltransferase | - |
| K6J78_RS17080 | 802569..803066 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K6J78_RS17085 | 803063..803335 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K6J78_RS17090 | 803728..803853 | + | 126 | WP_001900195.1 | DUF645 family protein | - |
| K6J78_RS17100 | 804103..804549 | + | 447 | WP_000006157.1 | hypothetical protein | - |
| K6J78_RS17105 | 804697..804966 | - | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| K6J78_RS17110 | 804959..805237 | - | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K6J78_RS18690 | 805288..805405 | + | 118 | Protein_708 | DUF3265 domain-containing protein | - |
| K6J78_RS17115 | 805523..805801 | + | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| K6J78_RS18695 | 806161..806259 | + | 99 | WP_223225486.1 | DUF3709 domain-containing protein | - |
| K6J78_RS17125 | 806459..806560 | + | 102 | WP_001921603.1 | hypothetical protein | - |
| K6J78_RS17130 | 806550..806936 | + | 387 | WP_000703163.1 | VOC family protein | - |
| K6J78_RS17135 | 807131..807382 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| K6J78_RS18700 | 807355..807504 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17140 | 807596..807838 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| K6J78_RS17145 | 808090..808368 | + | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| K6J78_RS17150 | 808677..808943 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| K6J78_RS17155 | 808930..809175 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| K6J78_RS17160 | 809271..810065 | + | 795 | WP_001911581.1 | hypothetical protein | - |
| K6J78_RS18705 | 810062..810178 | + | 117 | WP_086010881.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17165 | 810168..810296 | + | 129 | WP_071908338.1 | general secretion pathway protein GspI | - |
| K6J78_RS17170 | 810357..810539 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| K6J78_RS17175 | 810755..811759 | + | 1005 | WP_000964920.1 | LD-carboxypeptidase | - |
| K6J78_RS17180 | 811912..812271 | + | 360 | WP_001071541.1 | VOC family protein | - |
| K6J78_RS18710 | 812338..812523 | + | 186 | WP_001999468.1 | hypothetical protein | - |
| K6J78_RS18715 | 812655..812777 | + | 123 | WP_001937972.1 | DUF3709 domain-containing protein | - |
| K6J78_RS17190 | 813045..813551 | + | 507 | WP_000393074.1 | hypothetical protein | - |
| K6J78_RS17195 | 813708..814094 | + | 387 | WP_000703163.1 | VOC family protein | - |
| K6J78_RS17200 | 814351..814554 | + | 204 | WP_001911580.1 | hypothetical protein | - |
| K6J78_RS17205 | 814749..815000 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| K6J78_RS18720 | 814973..815122 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17210 | 815269..815694 | + | 426 | WP_000415750.1 | hypothetical protein | - |
| K6J78_RS17215 | 815900..816523 | + | 624 | WP_000247070.1 | DUF1349 domain-containing protein | - |
| K6J78_RS17220 | 816736..817215 | + | 480 | WP_000009888.1 | lecithin retinol acyltransferase family protein | - |
| K6J78_RS18725 | 817212..817328 | + | 117 | WP_086010882.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17225 | 817403..817816 | + | 414 | WP_000049420.1 | VOC family protein | - |
| K6J78_RS17230 | 817967..818245 | - | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| K6J78_RS17235 | 818242..818526 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K6J78_RS17240 | 818775..819236 | + | 462 | WP_001911578.1 | lipocalin family protein | - |
| K6J78_RS17245 | 819301..819897 | + | 597 | WP_000255434.1 | hypothetical protein | - |
| K6J78_RS18730 | 820091..820228 | + | 138 | WP_001890145.1 | hypothetical protein | - |
| K6J78_RS17250 | 820289..820471 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| K6J78_RS17255 | 820671..821144 | + | 474 | WP_001161076.1 | GrpB family protein | - |
| K6J78_RS17260 | 821159..821251 | + | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17265 | 821293..821919 | + | 627 | WP_000365424.1 | LysE family translocator | - |
| K6J78_RS17270 | 822042..822740 | + | 699 | WP_001890502.1 | hypothetical protein | - |
| K6J78_RS17275 | 822771..822860 | + | 90 | WP_072606010.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17280 | 823438..823617 | + | 180 | WP_001883058.1 | DUF645 family protein | - |
| K6J78_RS17285 | 823831..824226 | + | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| K6J78_RS17290 | 824354..824653 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J78_RS17295 | 824650..824892 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| K6J78_RS17300 | 825121..825699 | + | 579 | WP_000110120.1 | hypothetical protein | - |
| K6J78_RS17305 | 825721..825813 | + | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17310 | 826237..826920 | + | 684 | WP_000877436.1 | hypothetical protein | - |
| K6J78_RS17315 | 827134..827400 | + | 267 | WP_000937852.1 | hypothetical protein | - |
| K6J78_RS17320 | 827555..828154 | + | 600 | WP_000429495.1 | DUF6338 family protein | - |
| K6J78_RS17325 | 828435..829370 | + | 936 | WP_000051985.1 | restriction endonuclease | - |
| K6J78_RS17330 | 829336..829476 | + | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17335 | 829588..830610 | + | 1023 | WP_000954291.1 | hypothetical protein | - |
| K6J78_RS17340 | 830651..831157 | + | 507 | WP_001921103.1 | hypothetical protein | - |
| K6J78_RS17345 | 831218..831913 | - | 696 | WP_000213836.1 | hypothetical protein | - |
| K6J78_RS17350 | 831910..832850 | - | 941 | Protein_762 | IS3-like element ISVch4 family transposase | - |
| K6J78_RS17355 | 832869..834479 | - | 1611 | WP_002041336.1 | IS1634-like element ISSpu7 family transposase | - |
| K6J78_RS17360 | 834612..834854 | - | 243 | Protein_764 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|