MGE detailed information
MGE type: Prophage MGE length: 27530 bp
Accession: NC_017625 Location: 2221734..2249263 Organism: Escherichia coli DH1 Replicon: chromosome
Accession: NC_017625 Location: 2221734..2249263 Organism: Escherichia coli DH1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECDH1_RS10920 () | 2217983..2220409 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| ECDH1_RS10925 () | 2220608..2220913 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| ECDH1_RS10930 () | 2221021..2221731 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| ECDH1_RS10935 () | 2221734..2222294 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| ECDH1_RS10940 () | 2222329..2222670 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| ECDH1_RS10945 () | 2222805..2223131 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| ECDH1_RS10950 () | 2223337..2224551 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| ECDH1_RS10955 () | 2224563..2225582 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| ECDH1_RS25150 () | 2225640..2225750 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| ECDH1_RS25620 () | 2225770..2226927 | - | 1158 | Protein_2081 | Putative defective protein IntQ ; Integrase | Integrase |
| ECDH1_RS10965 () | 2226941..2227636 | - | 696 | Protein_2082 | IS3 family transposase IS2 | Transposase |
| ECDH1_RS23845 () | 2227633..2228400 | - | 768 | Protein_2083 | exonuclease | - |
| ECDH1_RS10975 () | 2228493..2228684 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| ECDH1_RS10980 () | 2228681..2228869 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| ECDH1_RS10990 () | 2229437..2229655 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| ECDH1_RS10995 () | 2229815..2229970 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| ECDH1_RS11000 () | 2230137..2230544 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| ECDH1_RS11005 () | 2230628..2230858 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| ECDH1_RS11010 () | 2230842..2231120 | + | 279 | Protein_2090 | hypothetical protein | - |
| ECDH1_RS22990 () | 2231155..2231304 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| ECDH1_RS11015 () | 2231741..2232073 | - | 333 | WP_001301033.1 | protein FlxA | - |
| ECDH1_RS23860 () | 2232276..2232581 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| ECDH1_RS11020 () | 2232606..2232845 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| ECDH1_RS11025 () | 2232845..2233132 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| ECDH1_RS11030 () | 2233204..2233359 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ECDH1_RS11035 () | 2233576..2233827 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| ECDH1_RS11040 () | 2233894..2234172 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| ECDH1_RS11045 () | 2234174..2235223 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| ECDH1_RS11050 () | 2235237..2235989 | + | 753 | WP_001047135.1 | antitermination protein | - |
| ECDH1_RS25630 () | 2236267..2236356 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| ECDH1_RS11055 () | 2236411..2236623 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| ECDH1_RS11060 () | 2236924..2237139 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| ECDH1_RS11065 () | 2237893..2238108 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| ECDH1_RS11070 () | 2238113..2238424 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| ECDH1_RS11075 () | 2238421..2238954 | + | 534 | WP_001092971.1 | lysozyme | - |
| ECDH1_RS11080 () | 2238951..2239448 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| ECDH1_RS11085 () | 2239811..2240023 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| ECDH1_RS23865 () | 2240034..2240222 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| ECDH1_RS25635 () | 2240225..2240290 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| ECDH1_RS11090 () | 2240369..2240524 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| ECDH1_RS11095 () | 2240696..2240869 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| ECDH1_RS11100 () | 2241021..2241431 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| ECDH1_RS11105 () | 2241489..2241722 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| ECDH1_RS11110 () | 2242111..2242680 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| ECDH1_RS11115 () | 2242631..2243593 | + | 963 | WP_001027733.1 | phage tail protein | - |
| ECDH1_RS11120 () | 2243593..2244168 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| ECDH1_RS11125 () | 2244266..2244856 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ECDH1_RS11130 () | 2245173..2245406 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| ECDH1_RS25640 () | 2245475..2245588 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| ECDH1_RS11135 () | 2246109..2247476 | + | 1368 | Protein_2121 | MHS family MFS transporter | - |
| ECDH1_RS11140 () | 2247565..2249025 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| ECDH1_RS11145 () | 2249060..2249263 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ECDH1_RS11150 () | 2249440..2250126 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| ECDH1_RS11155 () | 2250215..2250961 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| ECDH1_RS11160 () | 2251098..2253143 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| ECDH1_RS11165 () | 2253187..2253705 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.009 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.009 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.009 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.005 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.009 |