MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NC_011601 Location: 3945427..3945885 Organism: Escherichia coli O127:H6 str. E2348/69 Replicon: chromosome
Accession: NC_011601 Location: 3945427..3945885 Organism: Escherichia coli O127:H6 str. E2348/69 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E2348C_RS20265 (E2348_C_3776) | 3940652..3941404 | - | 753 | WP_000279544.1 | cellulose biosynthesis protein BcsQ | - |
| E2348C_RS20270 (E2348_C_3777) | 3941416..3941604 | - | 189 | WP_001063314.1 | YhjR family protein | - |
| E2348C_RS20275 (E2348_C_3778) | 3941877..3943448 | + | 1572 | WP_001204947.1 | cellulose biosynthesis protein BcsE | - |
| E2348C_RS20280 (E2348_C_3779) | 3943445..3943636 | + | 192 | WP_000988310.1 | cellulose biosynthesis protein BcsF | - |
| E2348C_RS20285 (E2348_C_3780) | 3943633..3945312 | + | 1680 | WP_000191555.1 | cellulose biosynthesis protein BcsG | - |
| E2348C_RS20290 (E2348_C_3781) | 3945427..3945885 | - | 459 | WP_000526113.1 | IS200-IS605 family transposase IS200C | Transposase |
| E2348C_RS27740 (E2348C_3782) | 3946109..3946216 | - | 108 | WP_001295224.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| E2348C_RS28545 (E2348C_3783) | 3946592..3946699 | - | 108 | WP_000170747.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| E2348C_RS20310 (E2348_C_3784) | 3947175..3948446 | + | 1272 | WP_001339917.1 | amino acid permease | - |
| E2348C_RS20315 (E2348_C_3785) | 3948463..3949470 | - | 1008 | WP_001262465.1 | HipA domain-containing protein | Toxin Detail |
| E2348C_RS20320 (E2348_C_3786) | 3949470..3949781 | - | 312 | WP_001346664.1 | HipA N-terminal domain-containing protein | Antitoxin Detail |
| E2348C_RS20325 (E2348_C_3787) | 3949766..3950089 | - | 324 | WP_000563102.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain LSN03-016011/A | IS/Tn | TA119028 | NZ_CP035884 | 568190..568648 | 0.002 | |
| Escherichia coli strain SCU-111 | IS/Tn | TA155107 | NZ_CP051728 | 51961..52419 | 0.007 | |
| Escherichia coli strain E2348/69 | IS/Tn | TA169224 | NZ_CP059840 | 235028..235486 | 0 | |
| Escherichia coli O127:H6 isolate EPEC E2348/69 variety | IS/Tn | TA293505 | NZ_LT827011 | 3829869..3830327 | 0 | |
| Escherichia coli O127:H6 isolate EPEC1 | IS/Tn | TA293640 | NZ_LT903847 | 1015014..1015472 | 0 |