MGE detailed information
MGE type: Integron MGE length: 13575 bp
Accession: NC_009456 Location: 799858..813432 Organism: Vibrio cholerae O395 Replicon: chromosome
Accession: NC_009456 Location: 799858..813432 Organism: Vibrio cholerae O395 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VC0395_RS19770 () | 795414..795647 | + | 234 | WP_079993135.1 | tyrosine-type recombinase/integrase | - |
| VC0395_RS03525 () | 796508..796780 | + | 273 | WP_000214050.1 | hypothetical protein | - |
| VC0395_RS03530 () | 796782..797189 | + | 408 | WP_000022491.1 | hypothetical protein | - |
| VC0395_RS03535 () | 797306..798250 | + | 945 | WP_001027829.1 | hypothetical protein | - |
| VC0395_RS03540 () | 798264..798533 | + | 270 | WP_000402869.1 | hypothetical protein | - |
| VC0395_RS03555 () | 800345..800758 | - | 414 | WP_000049420.1 | VOC family protein | - |
| VC0395_RS03560 () | 800942..801457 | - | 516 | WP_000343779.1 | hypothetical protein | VF |
| VC0395_RS03565 () | 801651..801935 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| VC0395_RS03570 () | 801932..802210 | + | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| VC0395_RS03575 () | 802349..802744 | - | 396 | WP_001000867.1 | hypothetical protein | - |
| VC0395_RS20505 () | 802995..803120 | - | 126 | WP_001905700.1 | DUF645 family protein | - |
| VC0395_RS03590 () | 803419..803940 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| VC0395_RS03595 () | 803934..804203 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| VC0395_RS20695 () | 804234..804338 | - | 105 | WP_099607150.1 | acetyltransferase | Antitoxin Detail |
| VC0395_RS03600 () | 804395..804994 | - | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| VC0395_RS03605 () | 805144..806016 | - | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| VC0395_RS03610 () | 806191..806409 | - | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS03615 () | 806473..806910 | - | 438 | WP_000503164.1 | IS200-IS605 family transposase IS1004 | Transposase |
| VC0395_RS03620 () | 807029..807238 | - | 210 | Protein_694 | GNAT family N-acetyltransferase | - |
| VC0395_RS03625 () | 807374..807763 | - | 390 | WP_001081302.1 | hypothetical protein | - |
| VC0395_RS03630 () | 807938..808180 | - | 243 | WP_000107462.1 | hypothetical protein | - |
| VC0395_RS03635 () | 808388..809305 | - | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| VC0395_RS03640 () | 809539..809841 | - | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS03645 () | 809829..810086 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC0395_RS03650 () | 810288..810821 | - | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VC0395_RS20930 () | 810818..811243 | - | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| VC0395_RS03660 () | 811310..811681 | - | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| VC0395_RS03665 () | 811822..812109 | - | 288 | WP_000426470.1 | hypothetical protein | - |
| VC0395_RS03670 () | 812261..812929 | - | 669 | WP_000043871.1 | hypothetical protein | - |
| VC0395_RS03675 () | 813160..813432 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| VC0395_RS03680 () | 813429..813926 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VC0395_RS03685 () | 814223..814717 | + | 495 | WP_000477435.1 | hypothetical protein | - |
| VC0395_RS03695 () | 815035..816693 | + | 1659 | WP_001125478.1 | recombinase family protein | - |
| VC0395_RS03705 () | 817180..817581 | - | 402 | WP_012706059.1 | hypothetical protein | - |
| VC0395_RS03710 () | 817596..817973 | - | 378 | WP_000073388.1 | hypothetical protein | - |
| VC0395_RS19810 () | 817990..818265 | - | 276 | WP_000095573.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|