MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43431 bp
Accession: NC_004116 Location: 1962263..2005693 Organism: Streptococcus agalactiae 2603V/R Replicon: chromosome
Accession: NC_004116 Location: 1962263..2005693 Organism: Streptococcus agalactiae 2603V/R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAG_RS12400 (SAG1972) | 1957541..1958257 | + | 717 | WP_000859573.1 | MerR family transcriptional regulator | - |
| SAG_RS12405 (SAG1973) | 1958296..1958766 | - | 471 | WP_000631751.1 | GNAT family N-acetyltransferase | - |
| SAG_RS12410 (SAG1974) | 1958738..1959196 | - | 459 | WP_000350744.1 | NUDIX hydrolase | - |
| SAG_RS12415 (SAG1976) | 1959332..1959802 | - | 471 | WP_001051348.1 | DUF3013 family protein | - |
| SAG_RS12420 (SAG1977) | 1960129..1960620 | + | 492 | WP_000586891.1 | GNAT family N-acetyltransferase | - |
| SAG_RS12425 (SAG1978) | 1960613..1961881 | + | 1269 | WP_000774760.1 | replication-associated recombination protein A | - |
| SAG_RS12435 (SAG1979) | 1962397..1963158 | - | 762 | WP_000147179.1 | ABC transporter permease | - |
| SAG_RS12440 (SAG1980) | 1963155..1964057 | - | 903 | WP_000125376.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| SAG_RS12445 (SAG1981) | 1964054..1964260 | - | 207 | WP_001095354.1 | PLDc N-terminal domain-containing protein | - |
| SAG_RS12450 (SAG1982) | 1964250..1965329 | - | 1080 | WP_000578732.1 | helix-turn-helix domain-containing protein | - |
| SAG_RS12455 (SAG1983) | 1965710..1966027 | + | 318 | WP_000355464.1 | hypothetical protein | - |
| SAG_RS12460 (SAG1984) | 1966024..1966590 | + | 567 | WP_000705809.1 | TIGR00730 family Rossman fold protein | - |
| SAG_RS12465 (SAG1985) | 1966644..1966799 | - | 156 | WP_000564579.1 | hypothetical protein | - |
| SAG_RS12470 (SAG1986) | 1966825..1967952 | - | 1128 | WP_001262283.1 | IS91 family transposase ISSde12 | Transposase |
| SAG_RS12475 (SAG1987) | 1967956..1968141 | - | 186 | WP_000184042.1 | DUF3173 domain-containing protein | - |
| SAG_RS12480 (SAG1988) | 1968202..1969230 | - | 1029 | WP_000483441.1 | replication initiation factor domain-containing protein | - |
| SAG_RS12485 (SAG1989) | 1969233..1969652 | - | 420 | WP_000201152.1 | hypothetical protein | - |
| SAG_RS12490 (SAG1990) | 1969978..1970262 | - | 285 | WP_164920427.1 | hypothetical protein | - |
| SAG_RS12495 (SAG1991) | 1970585..1971199 | + | 615 | WP_000221046.1 | helix-turn-helix domain-containing protein | - |
| SAG_RS12500 (SAG1992) | 1971372..1972928 | - | 1557 | WP_001009229.1 | SIR2 family protein | - |
| SAG_RS12505 (SAG1993) | 1973269..1974390 | - | 1122 | WP_000257255.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAG_RS12510 (SAG1994) | 1974440..1974766 | - | 327 | WP_001188031.1 | DUF771 domain-containing protein | - |
| SAG_RS12515 (SAG1995) | 1974959..1975591 | - | 633 | WP_000578743.1 | hypothetical protein | - |
| SAG_RS12520 (SAG1996) | 1975672..1976463 | - | 792 | WP_000048867.1 | LPXTG cell wall anchor domain-containing protein | - |
| SAG_RS12525 (SAG1997) | 1976480..1977028 | - | 549 | WP_000829082.1 | hypothetical protein | - |
| SAG_RS12530 (SAG1998) | 1977028..1978401 | - | 1374 | WP_000511832.1 | CHAP domain-containing protein | - |
| SAG_RS12535 (SAG1999) | 1978564..1978707 | + | 144 | WP_000528441.1 | putative holin-like toxin | - |
| SAG_RS12540 (SAG2000) | 1978897..1980897 | - | 2001 | WP_000357668.1 | hypothetical protein | - |
| SAG_RS12545 (SAG2001) | 1980913..1983183 | - | 2271 | WP_001279020.1 | ATP-binding protein | - |
| SAG_RS12555 (SAG2004) | 1984099..1984275 | - | 177 | Protein_1934 | IS5 family transposase IS1381A | Transposase |
| SAG_RS12560 (SAG2005) | 1984296..1984706 | - | 411 | WP_000390747.1 | conjugal transfer protein | - |
| SAG_RS12565 (SAG2006) | 1984717..1984983 | - | 267 | WP_001055037.1 | hypothetical protein | - |
| SAG_RS12570 (SAG2007) | 1985004..1985957 | - | 954 | WP_000565539.1 | conjugal transfer protein | - |
| SAG_RS12575 (SAG2008) | 1986010..1986264 | - | 255 | WP_000481712.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| SAG_RS12580 (SAG2009) | 1986257..1986523 | - | 267 | WP_000387490.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| SAG_RS12585 (SAG2010) | 1986668..1987141 | - | 474 | WP_000560386.1 | hypothetical protein | - |
| SAG_RS12590 (SAG2011) | 1987149..1987631 | - | 483 | WP_000383283.1 | antirestriction protein ArdA | - |
| SAG_RS12595 (SAG2012) | 1987684..1987956 | - | 273 | WP_000017154.1 | hypothetical protein | - |
| SAG_RS12600 (SAG2013) | 1988091..1988660 | - | 570 | WP_000010056.1 | hypothetical protein | - |
| SAG_RS12605 (SAG2014) | 1988663..1990012 | - | 1350 | WP_000491711.1 | AAA family ATPase | - |
| SAG_RS12610 (SAG2015) | 1990209..1990508 | - | 300 | WP_000737133.1 | HTH-type transcriptional regulator Xre | VF |
| SAG_RS12615 (SAG2016) | 1990492..1990869 | - | 378 | WP_000287183.1 | hypothetical protein | - |
| SAG_RS12620 (SAG2017) | 1990885..1992117 | - | 1233 | WP_000338839.1 | replication initiation factor domain-containing protein | - |
| SAG_RS12625 (SAG2018) | 1992405..1994123 | - | 1719 | WP_000113194.1 | cell division protein FtsK | - |
| SAG_RS12630 (SAG2019) | 1994143..1994604 | - | 462 | WP_001062569.1 | hypothetical protein | - |
| SAG_RS12635 (SAG2020) | 1994626..1994922 | - | 297 | WP_000808311.1 | hypothetical protein | - |
| SAG_RS12640 (SAG2021) | 1994982..1997480 | - | 2499 | Protein_1951 | hypothetical protein | VF |
| SAG_RS12645 (SAG2022) | 1997467..1998720 | - | 1254 | WP_001281641.1 | ISL3 family transposase ISStma11 | Transposase |
| SAG_RS12650 (SAG2023) | 1998880..2000520 | - | 1641 | WP_001031939.1 | mercury(II) reductase | - |
| SAG_RS12655 (SAG2024) | 2000549..2000941 | - | 393 | WP_000640387.1 | Hg(II)-responsive transcriptional regulator | - |
| SAG_RS12660 (SAG2025) | 2001647..2003215 | + | 1569 | WP_001053209.1 | Nramp family divalent metal transporter | - |
| SAG_RS12665 (SAG2026) | 2003783..2004505 | - | 723 | WP_000901036.1 | ABC transporter permease | - |
| SAG_RS12670 (SAG2027) | 2004509..2005126 | - | 618 | WP_000470461.1 | ABC transporter ATP-binding protein | - |
| SAG_RS12675 (SAG2028) | 2005184..2005294 | - | 111 | WP_001867162.1 | epipeptide YydF family RiPP | - |
| SAG_RS12680 (SAG2029) | 2005813..2006667 | - | 855 | WP_001204133.1 | aminoglycoside 6-adenylyltransferase | - |
| SAG_RS12685 (SAG2030) | 2006846..2007238 | - | 393 | WP_001191784.1 | DUF2785 domain-containing protein | - |
| SAG_RS12690 (SAG2031) | 2007673..2008281 | - | 609 | WP_000589231.1 | DUF2812 domain-containing protein | - |
| SAG_RS12695 (SAG2032) | 2008268..2008603 | - | 336 | WP_000827865.1 | PadR family transcriptional regulator | - |
| SAG_RS12700 (SAG2033) | 2009125..2009613 | - | 489 | WP_000403109.1 | GNAT family N-acetyltransferase | - |
| SAG_RS12705 (SAG2034) | 2009782..2010543 | - | 762 | WP_000838139.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus agalactiae strain HU-GS5823 | Integrative and Conjugative Element | TA32464 | NZ_AP018935 | 2051388..2083757 | 0.007 | |
| Streptococcus agalactiae strain GCMC97051 | Integrative and Conjugative Element | TA33222 | NZ_AP020310 | 2061246..2091191 | 0.009 | |
| Streptococcus agalactiae strain B508 | Integrative and Conjugative Element | TA77357 | NZ_CP021770 | 1789191..1821491 | 0.007 | |
| Streptococcus agalactiae strain FDAARGOS_670 | Integrative and Conjugative Element | TA140037 | NZ_CP044090 | 1931523..1979629 | 0.007 | |
| Streptococcus agalactiae strain BJ01 | Integrative and Conjugative Element | TA168751 | NZ_CP059383 | 1956238..1988537 | 0.007 |