Detailed information NTG0999800

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EL078_RS03115
• Genome accession: NZ_LR134282
• Coordinates: 578001..578963 (+)
• Length: 320 a.a.
• NCBI ID: WP_126437696.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain NCTC8140
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 573001..583963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL078_RS03085 (NCTC8140_00618)	sodA	573180..573791 (+)	612	WP_039698404.1	superoxide dismutase SodA	-
EL078_RS03090 (NCTC8140_00619)	-	573897..574622 (+)	726	WP_126437693.1	YebC/PmpR family DNA-binding transcriptional regulator	-
EL078_RS03095 (NCTC8140_00620)	queA	574670..575698 (-)	1029	WP_021141922.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
EL078_RS03100 (NCTC8140_00621)	-	575858..576364 (+)	507	WP_021141923.1	VIT1/CCC1 transporter family protein	-
EL078_RS03105 (NCTC8140_00622)	nagB	576498..577202 (+)	705	WP_126437694.1	glucosamine-6-phosphate deaminase	-
EL078_RS03110 (NCTC8140_00623)	-	577235..577951 (+)	717	WP_126437695.1	pseudouridine synthase	-
EL078_RS03115 (NCTC8140_00624)	coiA	578001..578963 (+)	963	WP_126437696.1	competence protein CoiA	Machinery gene
EL078_RS03120 (NCTC8140_00625)	pepF	578963..580765 (+)	1803	WP_074669097.1	oligoendopeptidase F	Regulator
EL078_RS03125 (NCTC8140_00626)	-	580840..581355 (+)	516	WP_126437697.1	GNAT family N-acetyltransferase	-
EL078_RS03130 (NCTC8140_00627)	-	581357..581968 (+)	612	WP_126437698.1	HAD-IA family hydrolase	-
EL078_RS03135 (NCTC8140_00628)	-	582020..582721 (+)	702	WP_126437699.1	O-methyltransferase	-
EL078_RS03140 (NCTC8140_00629)	-	582790..583851 (+)	1062	WP_021141931.1	peptidyl-prolyl cis-trans isomerase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37773.32 Da
• Isoelectric Point: 9.2617

>NTDB_id=999800 EL078_RS03115 WP_126437696.1 578001..578963(+) (coiA) [Streptococcus equinus strain NCTC8140]
MLSALDENGKLVSLLDEIPKRQDFCCPACHSPVRLKNGTVMRTHFAHVSLENCDFYSENESSEHLGLKSELYRSISRTDE
VVIEKILPELGQVADLFVNDKLALEVQCSRLSEKRLRQRTISYQNAGYSVLWLLGEKLWLRHHLTPLHRQFLYFSQNMGF
HMWELDLKKSEIRLNYLIYEDLHGQVHYLTKPCAFSSDVMAFLRLPYQRQTLSAYQVTQDSKITSYIQKQLIARNSRWLK
RQEEAYLKGKNLLTQSLSEFYPQVKPPEFKEGFCQIKQNLTAFYKTFEDYYQNQGQKRIQTLYPPAYYGRMVNNAQKRRK

Nucleotide

• Length: 963 bp

>NTDB_id=999800 EL078_RS03115 WP_126437696.1 578001..578963(+) (coiA) [Streptococcus equinus strain NCTC8140]
ATGCTGTCTGCGCTTGATGAAAATGGAAAATTAGTTTCTTTGTTAGATGAAATCCCGAAACGGCAAGATTTTTGCTGCCC
AGCTTGTCACTCACCAGTTCGTCTTAAAAATGGTACGGTCATGCGGACGCATTTTGCTCATGTCTCTTTAGAAAATTGTG
ATTTTTACAGTGAAAATGAAAGCAGCGAGCACCTAGGGTTAAAATCGGAGCTGTATCGCAGCATTTCACGAACAGACGAA
GTTGTTATCGAAAAGATTTTGCCTGAACTAGGACAGGTGGCAGATTTATTTGTAAATGATAAGCTAGCTCTTGAGGTGCA
GTGCTCACGTTTATCCGAAAAACGACTTAGACAACGAACGATTTCATATCAAAATGCAGGCTATTCTGTCCTATGGCTTT
TAGGTGAGAAATTGTGGCTTCGTCATCATTTAACGCCGTTACATCGCCAGTTCCTTTATTTTTCGCAGAATATGGGGTTT
CACATGTGGGAATTGGATTTAAAGAAATCGGAGATACGGCTTAATTATCTTATTTATGAAGATTTGCATGGGCAGGTTCA
TTATTTGACAAAGCCGTGTGCTTTTTCGTCTGATGTCATGGCATTTTTACGACTTCCTTACCAAAGACAAACTTTGTCTG
CATATCAAGTCACTCAAGATTCAAAGATAACGTCTTACATTCAAAAGCAGCTCATCGCTCGAAATTCTCGTTGGTTAAAA
CGTCAAGAAGAGGCATATTTAAAGGGAAAAAATCTCCTTACTCAATCTTTGTCGGAATTTTATCCGCAAGTGAAACCACC
CGAATTTAAGGAAGGATTTTGTCAGATTAAGCAGAATTTGACAGCATTTTACAAGACTTTTGAGGATTATTATCAAAATC
AAGGTCAAAAACGAATTCAAACGCTTTACCCACCAGCATATTATGGTAGAATGGTTAATAATGCCCAGAAAAGGAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	49.838	96.563	0.481
coiA	Streptococcus mitis NCTC 12261	49.838	96.563	0.481
coiA	Streptococcus pneumoniae Rx1	49.515	96.563	0.478
coiA	Streptococcus pneumoniae D39	49.515	96.563	0.478
coiA	Streptococcus pneumoniae R6	49.515	96.563	0.478
coiA	Lactococcus lactis subsp. cremoris KW2	42.687	100	0.447