Detailed information NTG0997820

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: SriyCCGPB3_RS17230
• Genome accession: NZ_CP155568
• Coordinates: 3718414..3719472 (-)
• Length: 352 a.a.
• NCBI ID: WP_010484061.1
• Uniprot ID: A0A0L8AA94
• Organism: Stenotrophomonas riyadhensis strain ESTM1A_MKCTX4_10a
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3713414..3724472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SriyCCGPB3_RS17210 (SriyCCGPB3_003436)	-	3714343..3716310 (-)	1968	WP_350259551.1	type IV pilus secretin PilQ family protein	-
SriyCCGPB3_RS17215 (SriyCCGPB3_003437)	-	3716332..3716838 (-)	507	WP_350260381.1	pilus assembly protein PilP	-
SriyCCGPB3_RS17220 (SriyCCGPB3_003438)	pilO	3716865..3717521 (-)	657	WP_110713450.1	type 4a pilus biogenesis protein PilO	-
SriyCCGPB3_RS17225 (SriyCCGPB3_003439)	-	3717518..3718414 (-)	897	WP_350259552.1	PilN domain-containing protein	-
SriyCCGPB3_RS17230 (SriyCCGPB3_003440)	pilM	3718414..3719472 (-)	1059	WP_010484061.1	pilus assembly protein PilM	Machinery gene
SriyCCGPB3_RS17235 (SriyCCGPB3_003441)	-	3719692..3722115 (+)	2424	WP_350259553.1	penicillin-binding protein 1A	-
SriyCCGPB3_RS17240 (SriyCCGPB3_003442)	-	3722495..3723139 (+)	645	WP_010484059.1	hypothetical protein	-
SriyCCGPB3_RS17245 (SriyCCGPB3_003443)	-	3723421..3724164 (-)	744	WP_071229172.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37753.41 Da
• Isoelectric Point: 4.4089

>NTDB_id=997820 SriyCCGPB3_RS17230 WP_010484061.1 3718414..3719472(-) (pilM) [Stenotrophomonas riyadhensis strain ESTM1A_MKCTX4_10a]
MGLIPKSQSPLVGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAMNRSGSKAKLAAAA
VAGSAVITKVIPMPAELDENDMEAQIELEAVNYIPYPIEEVNLDFEVIGAIPNNPEMVQVLLAASRSENVELRQSALELG
GLQAKVMDVEAFAVENAYALVASELPVSIEGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEIMRRYGLSYEE
AGLAKRQGGLPESYEMEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAVLGGLPEMVEEQLGVPTVVANPLA
QMTLGPKVNAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=997820 SriyCCGPB3_RS17230 WP_010484061.1 3718414..3719472(-) (pilM) [Stenotrophomonas riyadhensis strain ESTM1A_MKCTX4_10a]
GTGGGGCTCATCCCAAAAAGTCAGTCGCCGCTTGTGGGCGTCGACATCAGTTCGACTGCGGTAAAGCTTTTGCAGCTGTC
CCGCAGTGGCAACCGTTTTCGTGTGGAACATTACGCTGTGGAACCTCTTCCGCCGAATGCGGTGGTGGAGAAGAACATCG
TGGAAGTGGAGGCCGTGGGTGAGGCCATCCGCCGTGCGATGAACCGCTCGGGGAGCAAGGCCAAGCTGGCCGCTGCCGCC
GTCGCCGGGTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGAGCTCGACGAAAACGACATGGAAGCCCAGATCGA
GCTGGAAGCGGTCAACTACATTCCGTACCCGATCGAGGAAGTGAACCTGGACTTCGAGGTGATCGGGGCGATCCCGAACA
ACCCGGAGATGGTCCAGGTGCTGCTGGCCGCGTCGCGTTCGGAGAACGTGGAACTGCGCCAGTCGGCGCTGGAGCTGGGT
GGCCTGCAGGCCAAGGTGATGGACGTGGAGGCCTTCGCGGTCGAGAACGCCTATGCCCTGGTCGCCAGCGAGCTGCCGGT
ATCCATCGAGGGCGTGGTCGCGCTGGTCGACATCGGTGCCACCATGACCACCCTCAATGTCCTGCGCGGCGGCCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGTGGCAAGCAGCTGACCGACGAGATCATGCGCCGCTACGGCCTGAGCTACGAGGAA
GCCGGACTGGCCAAGCGCCAGGGCGGGCTGCCGGAAAGCTACGAGATGGAAGTGCTGGAGCCGTTCAAGGAAGCCACGGT
CCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTATGCGGGCAGTGAGTTCAACCGCGTCGACCACATCGTGCTGGCCGGCG
GCTGCGCCGTGCTCGGCGGTCTGCCGGAAATGGTCGAGGAACAGCTGGGCGTGCCGACCGTGGTCGCCAACCCGCTGGCA
CAGATGACCCTGGGCCCGAAGGTGAACGCGCATGCGCTGGCCCAGGATGCCCCCGCGCTGATGATCGCCACCGGTCTGGC
GCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A0L8AA94

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.136	100	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
comM	Acinetobacter baylyi ADP1	50	100	0.5
pilM	Legionella pneumophila strain ERS1305867	47.578	99.716	0.474