Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ABC812_RS10790 Genome accession   NZ_CP155537
Coordinates   2092235..2092993 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain DP1322     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2087235..2097993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC812_RS10760 (ABC812_10755) comE 2087832..2088584 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  ABC812_RS10765 (ABC812_10760) comD/comD1 2088581..2089906 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  ABC812_RS10770 (ABC812_10765) comC/comC1 2089927..2090052 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  ABC812_RS10780 (ABC812_10775) rlmH 2090334..2090813 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABC812_RS10785 (ABC812_10780) htrA 2090996..2092177 (+) 1182 WP_000681597.1 trypsin-like peptidase domain-containing protein Regulator
  ABC812_RS10790 (ABC812_10785) spo0J 2092235..2092993 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  ABC812_RS10795 (ABC812_10790) dnaA 2093206..2094567 (+) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=997529 ABC812_RS10790 WP_000410378.1 2092235..2092993(+) (spo0J) [Streptococcus pneumoniae strain DP1322]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=997529 ABC812_RS10790 WP_000410378.1 2092235..2092993(+) (spo0J) [Streptococcus pneumoniae strain DP1322]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment