Detailed information NTG0997448

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: ABC804_RS08470
• Genome accession: NZ_CP155536
• Coordinates: 1603926..1604414 (+)
• Length: 162 a.a.
• NCBI ID: WP_307774349.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M264-3
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1598926..1609414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC804_RS08430 (ABC804_08425)	-	1599027..1599716 (-)	690	WP_000760526.1	CPBP family intramembrane glutamic endopeptidase	-
ABC804_RS08435 (ABC804_08430)	-	1599768..1600151 (-)	384	WP_000877381.1	hypothetical protein	-
ABC804_RS08440 (ABC804_08435)	-	1600937..1601056 (-)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
ABC804_RS08445 (ABC804_08440)	cipB	1601160..1601309 (-)	150	WP_001808912.1	bacteriocin-like peptide BlpO	Regulator
ABC804_RS08450 (ABC804_08445)	blpI	1601776..1601973 (-)	198	WP_001093258.1	bacteriocin-like peptide BlpI	-
ABC804_RS08455 (ABC804_08450)	comA/nlmT	1602255..1602842 (+)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
ABC804_RS08460 (ABC804_08455)	comA/nlmT	1602787..1603512 (+)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
ABC804_RS08465 (ABC804_08460)	comA/nlmT	1603502..1603942 (+)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
ABC804_RS08470 (ABC804_08465)	comA/nlmT	1603926..1604414 (+)	489	WP_307774349.1	ATP-binding cassette domain-containing protein	Regulator
ABC804_RS08475 (ABC804_08470)	-	1604425..1605786 (+)	1362	WP_001069092.1	bacteriocin secretion accessory protein	-
ABC804_RS08480 (ABC804_08475)	blpC	1605843..1605998 (+)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
ABC804_RS08485 (ABC804_08480)	-	1606040..1607380 (-)	1341	WP_001017622.1	sensor histidine kinase	-
ABC804_RS08490 (ABC804_08485)	comE/blpR	1607394..1608131 (-)	738	WP_001219127.1	response regulator transcription factor	Regulator
ABC804_RS08495 (ABC804_08490)	-	1608136..1608474 (-)	339	WP_000682119.1	LytTR family DNA-binding domain-containing protein	-
ABC804_RS08500 (ABC804_08495)	-	1608750..1609079 (+)	330	WP_000132570.1	hypothetical protein	-

Sequence

Protein

• Length: 162 a.a.
• Molecular weight: 18195.07 Da
• Isoelectric Point: 7.0620

>NTDB_id=997448 ABC804_RS08470 WP_307774349.1 1603926..1604414(+) (comA/nlmT) [Streptococcus pneumoniae strain M264-3]
MRRHINYLPQQAYIFNGSILENLTLGGNHMISQEDILKACEVAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARAL
LTKSPVLILDEATSGLDVLTEKKVIDNLMSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGIHQELMQAQGFYHHLF
NK

Nucleotide

• Length: 489 bp

>NTDB_id=997448 ABC804_RS08470 WP_307774349.1 1603926..1604414(+) (comA/nlmT) [Streptococcus pneumoniae strain M264-3]
TTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATTTTGGAAAACTTAACCTTGGGCGG
TAATCATATGATTAGTCAAGAAGATATTCTAAAAGCTTGTGAAGTAGCTGAAATCCGTCAAGACATTGAAAGAATGCCTA
TGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAGAAGCAACGAATCGCTCTCGCTCGTGCTCTT
TTAACTAAATCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTGACTGAGAAAAAAGTTATAGATAA
TCTTATGTCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGCCGAACGAACCAACCGTGTCATTG
TTCTTGACCAGGGGAAAATCATTGAAGTTGGTATCCACCAAGAGTTAATGCAAGCGCAAGGTTTCTACCATCATCTATTC
AATAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (2-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	72.05	99.383	0.716
comA	Streptococcus gordonii str. Challis substr. CH1	70.37	100	0.704
comA	Streptococcus mitis NCTC 12261	68.519	100	0.685
comA	Streptococcus pneumoniae Rx1	68.519	100	0.685
comA	Streptococcus pneumoniae D39	68.519	100	0.685
comA	Streptococcus pneumoniae R6	68.519	100	0.685
comA	Streptococcus mitis SK321	67.901	100	0.679
comA	Streptococcus pneumoniae TIGR4	67.901	100	0.679
rcrQ	Streptococcus mutans UA159	40.645	95.679	0.389