Detailed information NTG0996269

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LLNCDO184_RS07665
• Genome accession: NZ_CP155124
• Coordinates: 1467922..1468911 (-)
• Length: 329 a.a.
• NCBI ID: WP_153950915.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain NCDO184
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1462922..1473911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLNCDO184_RS07650 (LLNCDO184_07635)	-	1464288..1465214 (-)	927	WP_010906107.1	peptidyl-prolyl cis-trans isomerase	-
LLNCDO184_RS07655 (LLNCDO184_07640)	-	1465368..1466051 (-)	684	WP_010906108.1	O-methyltransferase	-
LLNCDO184_RS07660 (LLNCDO184_07645)	pepF	1466054..1467859 (-)	1806	WP_031559511.1	oligoendopeptidase F	Regulator
LLNCDO184_RS07665 (LLNCDO184_07650)	coiA	1467922..1468911 (-)	990	WP_153950915.1	competence protein CoiA	Machinery gene
LLNCDO184_RS07670 (LLNCDO184_07655)	-	1468985..1470070 (-)	1086	WP_003130405.1	YdcF family protein	-
LLNCDO184_RS07675 (LLNCDO184_07660)	-	1470232..1471056 (-)	825	WP_023164441.1	alpha/beta hydrolase	-
LLNCDO184_RS07680 (LLNCDO184_07665)	-	1471271..1472692 (-)	1422	WP_003130403.1	NCS2 family permease	-
LLNCDO184_RS07685 (LLNCDO184_07670)	-	1472999..1473835 (+)	837	WP_003130402.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 39452.06 Da
• Isoelectric Point: 8.7308

>NTDB_id=996269 LLNCDO184_RS07665 WP_153950915.1 1467922..1468911(-) (coiA) [Lactococcus lactis subsp. lactis strain NCDO184]
MLTAIDENGQVVNLLEIEVKELTGKYFCPSCKSELFIKNGVIKMPHFAHKSLKACDLWLENESEQHLGLKKALYQWFKKT
DKVEIEAYIPEFKQRPDLLVNDKIAIEIQCSHLSMKRLKERTENYQVHGFTVLWLMGQDLWLKDQITELQKNLVYFSENR
GFYYWELDFKAQKMRLKSLIHEDLRGKIIYLQEEIPFGEGRLIEQLRLPFLSQKLLTIPLIVDLKLAEFIRRQLYYCSPK
WLKIQEKYYQRGENLLNLTFERSFIAPLGLNLLEVFDDKIPLHKFTQIKHNINLYYENFLINFQQNSFKEVYSPRFYAIM
KKQKKDMNE

Nucleotide

• Length: 990 bp

>NTDB_id=996269 LLNCDO184_RS07665 WP_153950915.1 1467922..1468911(-) (coiA) [Lactococcus lactis subsp. lactis strain NCDO184]
ATGTTGACAGCAATTGATGAAAATGGACAAGTAGTAAACTTATTAGAAATAGAAGTAAAAGAACTGACAGGAAAATATTT
TTGTCCTTCTTGTAAATCAGAGTTATTTATAAAAAATGGTGTAATAAAGATGCCTCACTTTGCTCATAAATCTCTCAAAG
CTTGCGACTTATGGCTTGAAAACGAATCTGAACAACATTTAGGATTAAAAAAAGCACTCTATCAATGGTTTAAAAAAACT
GATAAGGTGGAAATTGAAGCTTATATTCCTGAATTTAAGCAGAGGCCAGATTTATTGGTAAATGATAAAATAGCTATTGA
AATTCAATGTTCTCATCTTTCTATGAAACGTTTAAAAGAAAGGACAGAGAATTATCAAGTCCACGGTTTTACGGTACTTT
GGCTTATGGGGCAAGATTTATGGTTAAAAGACCAAATAACAGAACTTCAAAAAAATCTAGTCTATTTTTCAGAAAATAGA
GGTTTCTATTATTGGGAGTTAGATTTCAAAGCTCAGAAGATGAGATTAAAATCCCTGATTCATGAAGATTTGCGTGGAAA
AATTATTTATTTACAAGAAGAAATTCCTTTTGGGGAAGGACGACTTATTGAGCAATTACGACTGCCTTTTTTATCACAAA
AGTTACTGACAATACCACTTATTGTTGATCTTAAACTAGCAGAATTTATTCGTCGGCAACTTTATTATTGTTCACCAAAA
TGGTTGAAAATTCAGGAAAAATATTACCAAAGAGGTGAAAATTTGTTGAATTTGACTTTTGAACGTTCATTTATTGCTCC
TTTGGGATTGAACTTACTTGAAGTTTTTGATGATAAAATTCCTTTACATAAATTTACTCAAATTAAGCATAATATTAATC
TCTATTATGAAAACTTTTTAATAAATTTTCAGCAAAATAGCTTTAAGGAAGTCTATTCTCCCCGTTTCTATGCTATAATG
AAAAAGCAGAAGAAGGATATGAATGAATGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	74.847	99.088	0.742
coiA	Streptococcus pneumoniae TIGR4	42.857	97.872	0.419
coiA	Streptococcus pneumoniae Rx1	42.857	97.872	0.419
coiA	Streptococcus pneumoniae D39	42.857	97.872	0.419
coiA	Streptococcus pneumoniae R6	42.857	97.872	0.419
coiA	Streptococcus mitis NCTC 12261	42.633	96.96	0.413