Detailed information NTG0099396

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: G573_RS0100205
• Genome accession: NZ_AUIN01000001
• Coordinates: 39490..40491 (+)
• Length: 333 a.a.
• NCBI ID: WP_051175676.1
• Uniprot ID: -
• Organism: Streptococcus devriesei DSM 19639
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 34490..45491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G573_RS0100175	-	34673..35071 (+)	399	WP_027974840.1	SRPBCC family protein	-
G573_RS0100180	-	35135..36181 (+)	1047	WP_027974841.1	hypothetical protein	-
G573_RS11480	-	36174..36326 (+)	153	WP_169364428.1	hypothetical protein	-
G573_RS0100190	purB	36492..37790 (+)	1299	WP_027974842.1	adenylosuccinate lyase	-
G573_RS0100195	comR	37916..38830 (+)	915	WP_027974843.1	helix-turn-helix domain-containing protein	Regulator
G573_RS0100205	ruvB	39490..40491 (+)	1002	WP_051175676.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
G573_RS0100210	-	40520..40942 (+)	423	WP_027974845.1	low molecular weight protein-tyrosine-phosphatase	-
G573_RS0100215	-	41008..41388 (+)	381	WP_027974846.1	membrane protein	-
G573_RS0100220	-	41385..43169 (+)	1785	WP_027974847.1	acyltransferase family protein	-
G573_RS0100225	thrC	43785..45269 (+)	1485	WP_027974848.1	threonine synthase	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 37566.91 Da
• Isoelectric Point: 4.4984

>NTDB_id=99396 G573_RS0100205 WP_051175676.1 39490..40491(+) (ruvB) [Streptococcus devriesei DSM 19639]
MTRILDNELMGDEEFAERTLRPQYLQEYIGQNKVKDQLKIFIEAAKQRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAVLNELEPGDVLFIDEIHRMPMAVEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYTEADLTEIVERTADIFEMEITHQASLELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
NQITDKALTMLDVDHEGLDYIDQKILKTMIEMYHGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYDYIEDN

Nucleotide

• Length: 1002 bp

>NTDB_id=99396 G573_RS0100205 WP_051175676.1 39490..40491(+) (ruvB) [Streptococcus devriesei DSM 19639]
ATGACTAGAATTTTAGATAATGAGCTTATGGGTGATGAAGAGTTTGCTGAACGAACTCTGCGCCCGCAGTATTTGCAGGA
ATATATTGGTCAAAATAAGGTAAAGGATCAGCTGAAAATTTTTATTGAGGCGGCCAAGCAGCGCGATGAGGCTCTGGATC
ATGTCTTGCTTTTTGGTCCTCCGGGGCTTGGTAAGACCACGATGGCCTTTGTCATTGCGAATGAACTGGGAGTCAATCTC
AAACAAACCAGCGGACCGGCTATTGAGAAGGCTGGTGATTTGGTAGCTGTTCTCAATGAATTGGAACCTGGAGATGTGCT
TTTTATTGATGAAATTCACCGAATGCCCATGGCTGTAGAAGAGGTTCTTTACAGTGCTATGGAGGATTTCTACATTGACA
TTATGATTGGTGCCGGTGAAACCTCCCGCAGTGTGCATCTTGATTTGCCGCCATTCACGCTGATTGGTGCAACGACACGT
GCCGGTATGCTCTCTAATCCATTGCGGGCCCGCTTTGGGATTACCGGTCACATGGAATACTATACAGAAGCTGACCTGAC
CGAGATTGTTGAGCGGACAGCGGATATTTTTGAGATGGAAATTACCCATCAGGCTTCGCTCGAATTAGCCAGACGCTCCC
GCGGAACTCCGCGTATTGCTAACCGTCTGTTAAAGCGCGTGCGTGATTATGCGCAGATTATGGGAGACGGTCTGATTGAT
AATCAAATAACGGATAAGGCTCTGACCATGCTTGATGTGGATCATGAAGGGCTGGATTATATTGACCAGAAGATTCTCAA
AACAATGATTGAAATGTATCACGGCGGGCCTGTGGGCCTGGGAACGCTGTCGGTGAATATCGCGGAAGAGCGTGAAACGG
TTGAGGACATGTATGAGCCCTACCTCATTCAAAAAGGCTTTATTATGCGAACGCGCAGCGGCCGTGTCGCAACGGCTAAG
GCTTATGAACACTTGGGCTATGATTATATAGAAGACAACTAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	90.937	99.399	0.904
ruvB	Streptococcus pneumoniae D39	90.937	99.399	0.904
ruvB	Streptococcus pneumoniae TIGR4	90.634	99.399	0.901
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.991	96.997	0.592
ruvB	Helicobacter pylori 26695	49.845	96.997	0.483
ruvB	Synechocystis sp. PCC 6803	49.84	93.994	0.468