Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AAIK43_RS26300 | Genome accession | NZ_CP154792 |
| Coordinates | 5612257..5612769 (-) | Length | 170 a.a. |
| NCBI ID | WP_062680943.1 | Uniprot ID | A0A6J5B160 |
| Organism | Achromobacter denitrificans strain BP1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5607257..5617769
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAIK43_RS26275 (AAIK43_26275) | - | 5607536..5609086 (-) | 1551 | WP_125283143.1 | AAA family ATPase | - |
| AAIK43_RS26280 (AAIK43_26280) | - | 5609096..5609677 (-) | 582 | WP_088148837.1 | hypothetical protein | - |
| AAIK43_RS26285 (AAIK43_26285) | - | 5609674..5609871 (-) | 198 | WP_062680949.1 | hypothetical protein | - |
| AAIK43_RS26290 (AAIK43_26290) | - | 5609879..5611591 (-) | 1713 | WP_125283144.1 | hypothetical protein | - |
| AAIK43_RS26295 (AAIK43_26295) | - | 5611602..5612081 (-) | 480 | WP_125283145.1 | hypothetical protein | - |
| AAIK43_RS26300 (AAIK43_26300) | ssb | 5612257..5612769 (-) | 513 | WP_062680943.1 | single-stranded DNA-binding protein | Machinery gene |
| AAIK43_RS26305 (AAIK43_26305) | - | 5613070..5614254 (-) | 1185 | WP_062680941.1 | MFS transporter | - |
| AAIK43_RS26310 (AAIK43_26310) | uvrA | 5614433..5617318 (+) | 2886 | WP_062680939.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18377.39 Da Isoelectric Point: 5.9656
>NTDB_id=993914 AAIK43_RS26300 WP_062680943.1 5612257..5612769(-) (ssb) [Achromobacter denitrificans strain BP1]
MASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEG
RLKTRKWQDKDTGADRYSTEIVADQMQMLGGREDGGGGGASYGGGGGYDDAPRQQRAPAQRPAPQQRPAPAAAPASSGAN
LADMDDDIPF
MASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTWKDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEG
RLKTRKWQDKDTGADRYSTEIVADQMQMLGGREDGGGGGASYGGGGGYDDAPRQQRAPAQRPAPQQRPAPAAAPASSGAN
LADMDDDIPF
Nucleotide
Download Length: 513 bp
>NTDB_id=993914 AAIK43_RS26300 WP_062680943.1 5612257..5612769(-) (ssb) [Achromobacter denitrificans strain BP1]
ATGGCATCGGTTAACAAAGTCATACTCGTGGGCAATCTGGGACGCGACCCGGAAGTCCGCTATAGCCCCGACGGGGCGGC
AATCTGCAATATGTCCATTGCCACCACCTCCACCTGGAAAGACAAGGCGTCGGGCGAACGCCGCGAAGAAACGGAATGGC
ACCGCGTCGTCATGTACAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGTTCGGTCTACATCGAAGGC
CGCCTGAAGACGCGCAAGTGGCAAGACAAGGACACCGGCGCTGACCGCTACAGCACCGAAATCGTCGCCGACCAGATGCA
GATGCTGGGCGGCCGCGAAGACGGCGGCGGCGGTGGCGCCAGCTACGGTGGCGGCGGCGGCTACGACGACGCGCCGCGCC
AGCAGCGCGCGCCGGCGCAGCGCCCGGCGCCCCAGCAGCGCCCGGCTCCCGCGGCGGCTCCGGCCAGCAGCGGCGCCAAC
CTGGCGGACATGGACGACGACATTCCGTTCTGA
ATGGCATCGGTTAACAAAGTCATACTCGTGGGCAATCTGGGACGCGACCCGGAAGTCCGCTATAGCCCCGACGGGGCGGC
AATCTGCAATATGTCCATTGCCACCACCTCCACCTGGAAAGACAAGGCGTCGGGCGAACGCCGCGAAGAAACGGAATGGC
ACCGCGTCGTCATGTACAACCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGCCGTTCGGTCTACATCGAAGGC
CGCCTGAAGACGCGCAAGTGGCAAGACAAGGACACCGGCGCTGACCGCTACAGCACCGAAATCGTCGCCGACCAGATGCA
GATGCTGGGCGGCCGCGAAGACGGCGGCGGCGGTGGCGCCAGCTACGGTGGCGGCGGCGGCTACGACGACGCGCCGCGCC
AGCAGCGCGCGCCGGCGCAGCGCCCGGCGCCCCAGCAGCGCCCGGCTCCCGCGGCGGCTCCGGCCAGCAGCGGCGCCAAC
CTGGCGGACATGGACGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
54.645 |
100 |
0.588 |
| ssb | Neisseria gonorrhoeae MS11 |
52.198 |
100 |
0.559 |
| ssb | Glaesserella parasuis strain SC1401 |
50 |
100 |
0.547 |
| ssb | Neisseria meningitidis MC58 |
51.381 |
100 |
0.547 |