Detailed information NTG0099390

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: QMG88_RS17070
• Genome accession: NZ_AP027052
• Coordinates: 3706304..3706816 (-)
• Length: 170 a.a.
• NCBI ID: WP_022603536.1
• Uniprot ID: -
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig3
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3701304..3711816

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG88_RS17055 (TUMSATVNIG3_33160)	aroB	3702700..3703788 (-)	1089	WP_281827765.1	3-dehydroquinate synthase	-
QMG88_RS17060 (TUMSATVNIG3_33170)	aroK	3703811..3704329 (-)	519	WP_004405322.1	shikimate kinase AroK	-
QMG88_RS17065 (TUMSATVNIG3_33180)	pilQ	3704519..3706267 (-)	1749	WP_281827768.1	type IV pilus secretin PilQ family protein	Machinery gene
QMG88_RS17070 (TUMSATVNIG3_33190)	pilP	3706304..3706816 (-)	513	WP_022603536.1	pilus assembly protein PilP	Machinery gene
QMG88_RS17075 (TUMSATVNIG3_33200)	pilO	3706809..3707396 (-)	588	WP_004405328.1	type 4a pilus biogenesis protein PilO	Machinery gene
QMG88_RS17080 (TUMSATVNIG3_33210)	pilN	3707393..3707953 (-)	561	WP_004405329.1	PilN domain-containing protein	Machinery gene
QMG88_RS17085 (TUMSATVNIG3_33220)	pilM	3707946..3708962 (-)	1017	WP_004405331.1	type IV pilus assembly protein PilM	Machinery gene
QMG88_RS17090 (TUMSATVNIG3_33230)	-	3709108..3711606 (+)	2499	WP_281827772.1	PBP1A family penicillin-binding protein	-

Sequence

Protein

• Length: 170 a.a.
• Molecular weight: 18553.78 Da
• Isoelectric Point: 10.9516

>NTDB_id=99390 QMG88_RS17070 WP_022603536.1 3706304..3706816(-) (pilP) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
MNKALLGIIVVVALSGCRANQEPLQDFILKTQQSASTQVSKLQAEQTFKASEFNPLATRAPFALPKIAVVQTQPSLVKDC
WQPSSRRKNGKLERFALTQLQLKGVMGSGNSVSGIIQVPTGQVVKVKKGHYLGLNNGKIIKITPKHLTIQETLPDGLGCW
QQRNVKLALK

Nucleotide

• Length: 513 bp

>NTDB_id=99390 QMG88_RS17070 WP_022603536.1 3706304..3706816(-) (pilP) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
ATGAATAAAGCACTATTGGGAATCATAGTAGTGGTGGCTTTATCCGGATGTCGCGCCAATCAGGAGCCGCTGCAGGATTT
CATCTTAAAAACGCAGCAAAGTGCCTCGACACAAGTATCAAAGCTGCAGGCAGAACAAACTTTTAAGGCCAGTGAGTTCA
ATCCGTTGGCGACACGAGCACCGTTTGCGTTGCCTAAGATTGCGGTCGTTCAAACTCAGCCTTCACTGGTTAAAGATTGC
TGGCAGCCCTCTTCACGACGCAAAAACGGCAAGCTGGAACGCTTTGCTCTCACTCAGCTTCAGTTGAAAGGCGTAATGGG
AAGTGGGAACTCTGTTTCGGGCATCATTCAGGTGCCTACCGGTCAGGTCGTCAAAGTGAAAAAAGGACACTACCTCGGGC
TGAACAACGGCAAGATCATCAAGATAACACCTAAGCATCTCACCATTCAGGAAACCTTGCCTGATGGGTTGGGGTGCTGG
CAGCAGCGTAACGTTAAGCTCGCGTTGAAATAG

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (24-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio campbellii strain DS40M4	55.03	99.412	0.547
pilP	Vibrio cholerae strain A1552	51.765	100	0.518