Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   AAIS09_RS08900 Genome accession   NZ_CP154595
Coordinates   1756596..1757417 (-) Length   273 a.a.
NCBI ID   WP_000601683.1    Uniprot ID   A0A0B7LII6
Organism   Streptococcus pneumoniae strain serotype 4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1751596..1762417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAIS09_RS08855 (AAIS09_08840) - 1752140..1752457 (-) 318 WP_000615767.1 thioredoxin family protein -
  AAIS09_RS08860 (AAIS09_08845) - 1752454..1752753 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  AAIS09_RS08865 (AAIS09_08850) - 1752951..1753013 (-) 63 WP_219300018.1 hypothetical protein -
  AAIS09_RS08870 (AAIS09_08855) - 1753038..1753229 (-) 192 WP_000291826.1 cell wall-binding protein -
  AAIS09_RS08875 (AAIS09_08860) - 1753390..1754064 (-) 675 WP_000725751.1 LiaF transmembrane domain-containing protein -
  AAIS09_RS08880 (AAIS09_08865) - 1754070..1754516 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  AAIS09_RS08885 (AAIS09_08870) - 1754630..1755133 (-) 504 WP_000800944.1 phosphatase PAP2 family protein -
  AAIS09_RS08890 (AAIS09_08875) - 1755130..1755492 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  AAIS09_RS08895 (AAIS09_08880) rcrQ 1755558..1756589 (-) 1032 WP_050206160.1 ABC transporter ATP-binding protein/permease Regulator
  AAIS09_RS08900 (AAIS09_08885) rcrP 1756596..1757417 (-) 822 WP_000601683.1 ABC transporter permease Regulator
  AAIS09_RS08905 (AAIS09_08890) - 1757434..1757905 (-) 472 Protein_1741 MarR family winged helix-turn-helix transcriptional regulator -
  AAIS09_RS08910 (AAIS09_08895) - 1758029..1758745 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  AAIS09_RS08915 (AAIS09_08900) ply 1759625..1761040 (-) 1416 WP_001284359.1 cholesterol-dependent cytolysin pneumolysin -
  AAIS09_RS08920 (AAIS09_08905) - 1761051..1761461 (-) 411 WP_000595757.1 hypothetical protein -
  AAIS09_RS08925 (AAIS09_08910) - 1761454..1762062 (-) 609 WP_000083614.1 hypothetical protein -

Sequence


Protein


Download         Length: 273 a.a.        Molecular weight: 30590.15 Da        Isoelectric Point: 5.9310

>NTDB_id=993702 AAIS09_RS08900 WP_000601683.1 1756596..1757417(-) (rcrP) [Streptococcus pneumoniae strain serotype 4]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIVFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=993702 AAIS09_RS08900 WP_000601683.1 1756596..1757417(-) (rcrP) [Streptococcus pneumoniae strain serotype 4]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTGT
TTTCATGTCTTATGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LII6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

57.193

100

0.597


Multiple sequence alignment