Detailed information NTG0099348

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QMG91_RS16855
• Genome accession: NZ_AP027049
• Coordinates: 3675555..3676571 (-)
• Length: 338 a.a.
• NCBI ID: WP_004405331.1
• Uniprot ID: A0AAV2VI73
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3670555..3681571

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG91_RS16830 (TUMSATVNIG2_32680)	aroK	3671420..3671938 (-)	519	WP_004405322.1	shikimate kinase AroK	-
QMG91_RS16835 (TUMSATVNIG2_32690)	pilQ	3672128..3673876 (-)	1749	WP_281827768.1	type IV pilus secretin PilQ	Machinery gene
QMG91_RS16840 (TUMSATVNIG2_32700)	pilP	3673913..3674425 (-)	513	WP_022603536.1	pilus assembly protein PilP	Machinery gene
QMG91_RS16845 (TUMSATVNIG2_32710)	pilO	3674418..3675005 (-)	588	WP_004405328.1	type 4a pilus biogenesis protein PilO	Machinery gene
QMG91_RS16850 (TUMSATVNIG2_32720)	pilN	3675002..3675562 (-)	561	WP_004405329.1	PilN domain-containing protein	Machinery gene
QMG91_RS16855 (TUMSATVNIG2_32730)	pilM	3675555..3676571 (-)	1017	WP_004405331.1	type IV pilus assembly protein PilM	Machinery gene
QMG91_RS16860 (TUMSATVNIG2_32740)	-	3676717..3679215 (+)	2499	WP_281827772.1	penicillin-binding protein 1A	-
QMG91_RS16865 (TUMSATVNIG2_32750)	oxyR	3679270..3680151 (-)	882	WP_004405335.1	DNA-binding transcriptional regulator OxyR	-
QMG91_RS16870 (TUMSATVNIG2_32760)	-	3680330..3681061 (+)	732	WP_004405337.1	glutathione peroxidase	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 37082.32 Da
• Isoelectric Point: 6.4160

>NTDB_id=99348 QMG91_RS16855 WP_004405331.1 3675555..3676571(-) (pilM) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
MGRSLVVGIDFGHHSIKAVAMKPIGELMQLVGYNELTVPEDIFSENHTLDYQKIVKKLKELKKGLPLFSQQVAVSVPDKA
VISKVLQIEQDMDGREQEFAVHQAFGQQSPIPLEELSLDFFEVDQKVTTRSTTSTFQVYATRKEVVDSRVAALTKAGLKP
LTVDVHANSLLKVWRLASQVHPERRQWMLVDIGLNQTSLCTVAAGRTPFYKEVPFGTQNVAQSQEVSESISLSSDSLTQG
FVRELGEKLQRHISLYNSVNPQQNVDGIWLSGGGANLVGIADMLSSELSLEVAQLNPFGLVENGTKKSIKQLSDSAAYGV
AMGLAISGVEWLKGNHHA

Nucleotide

• Length: 1017 bp

>NTDB_id=99348 QMG91_RS16855 WP_004405331.1 3675555..3676571(-) (pilM) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
ATGGGTAGATCTTTAGTAGTTGGCATCGATTTCGGTCATCACAGTATCAAAGCTGTCGCCATGAAACCCATTGGCGAGCT
AATGCAACTTGTTGGTTATAATGAGCTTACTGTACCCGAAGATATTTTCTCTGAAAACCATACGCTCGATTATCAGAAGA
TTGTAAAGAAACTCAAAGAACTTAAAAAGGGCTTGCCTCTTTTTAGTCAACAAGTCGCAGTTTCCGTACCAGACAAGGCT
GTTATCAGCAAAGTTCTGCAAATTGAGCAGGATATGGATGGCAGAGAACAAGAGTTTGCCGTTCATCAGGCTTTTGGTCA
GCAGTCTCCCATTCCACTGGAAGAGCTGAGTTTAGACTTCTTCGAAGTGGATCAAAAAGTCACCACGCGCAGCACCACAT
CTACCTTTCAGGTTTATGCCACTCGCAAAGAAGTGGTTGATTCGCGAGTTGCGGCATTAACTAAGGCTGGGTTAAAACCG
TTGACGGTTGATGTACACGCCAACAGCCTGCTAAAAGTCTGGCGTCTTGCCAGCCAGGTTCATCCGGAACGCCGACAATG
GATGCTGGTGGATATCGGATTGAATCAAACGTCTTTATGCACGGTTGCCGCGGGAAGAACCCCTTTTTATAAAGAAGTGC
CTTTTGGTACCCAGAACGTGGCTCAGTCACAAGAAGTTTCTGAATCCATCTCGTTAAGCAGCGACTCTCTTACGCAAGGG
TTTGTCCGAGAGCTAGGCGAAAAGCTTCAGCGCCACATTAGCCTTTATAACTCCGTTAATCCTCAGCAAAACGTAGACGG
AATCTGGCTTAGTGGCGGCGGTGCCAATCTGGTTGGTATTGCGGACATGCTGAGCAGCGAGCTTTCCCTTGAAGTGGCAC
AGCTGAACCCGTTTGGTTTAGTGGAAAACGGCACTAAGAAGTCGATAAAGCAATTGTCTGATTCTGCCGCGTATGGTGTG
GCCATGGGGCTGGCAATCAGTGGAGTAGAATGGCTGAAAGGAAATCACCATGCATAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (8-223)

• Type IV pilus assembly protein PilM; (PilM_2) (239-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	54.706	100	0.55
pilM	Vibrio campbellii strain DS40M4	44.97	100	0.45